RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 TRAV8-6A0A0B4J262 113 aa5.28□□□□□ -1.56
USP28-202ENST00000535607 TRAV17A0A0B4J275 112 aa5.28□□□□□ -1.56
USP28-202ENST00000535607 IGLV5-39A0A0G2JS06 123 aa5.28□□□□□ -1.56
USP28-202ENST00000535607 A0A1W2PPM0 123 aa5.28□□□□□ -1.56
USP28-202ENST00000535607 hDV102S1A0JD36 115 aa5.28□□□□□ -1.56
USP28-202ENST00000535607 CGB1A6NKQ9 187 aa5.28□□□□□ -1.56
USP28-202ENST00000535607 GGTLC3B5MD39 225 aa5.28□□□□□ -1.56
USP28-202ENST00000535607 KLRC4-KLRK1H3BQV0 150 aa5.28□□□□□ -1.56
USP28-202ENST00000535607 RIPPLY3P57055 190 aa5.28□□□□□ -1.56
USP28-202ENST00000535607 PRCDQ00LT1 54 aa5.28□□□□□ -1.56
USP28-202ENST00000535607 AESQ08117 197 aa5.28□□□□□ -1.56
USP28-202ENST00000535607 SRSF6Q13247 344 aaKnown RBP5.28□□□□□ -1.56
USP28-202ENST00000535607 POU2AF1Q16633 256 aa5.28□□□□□ -1.56
USP28-202ENST00000535607 DEFB109BQ30KR1 87 aa5.28□□□□□ -1.56
USP28-202ENST00000535607 ACP7Q6ZNF0 438 aa5.28□□□□□ -1.56
USP28-202ENST00000535607 Q6ZVH6 145 aa5.28□□□□□ -1.56
USP28-202ENST00000535607 SSX8Q7RTT4 187 aa5.28□□□□□ -1.56
USP28-202ENST00000535607 ERASQ7Z444 233 aa5.28□□□□□ -1.56
USP28-202ENST00000535607 S100A7AQ86SG5 101 aa5.28□□□□□ -1.56
USP28-202ENST00000535607 RPRMLQ8N4K4 120 aa5.28□□□□□ -1.56
USP28-202ENST00000535607 RBMXL3Q8N7X1 1067 aaKnown RBP5.28□□□□□ -1.56
USP28-202ENST00000535607 MDS2Q8NDY4 140 aa5.28□□□□□ -1.56
USP28-202ENST00000535607 OR2Z1Q8NG97 314 aa5.28□□□□□ -1.56
USP28-202ENST00000535607 PERPQ96FX8 193 aa5.28□□□□□ -1.56
USP28-202ENST00000535607 FAM173AQ9BQD7 235 aa5.28□□□□□ -1.56
USP28-202ENST00000535607 CLEC5AQ9NY25 188 aa5.28□□□□□ -1.56
USP28-202ENST00000535607 EML6Q6ZMW3 1958 aa5.27□□□□□ -1.57
USP28-202ENST00000535607 SPTBN2O15020 2390 aa5.27□□□□□ -1.57
USP28-202ENST00000535607 NCOR2Q9Y618 2525 aa5.27□□□□□ -1.57
USP28-202ENST00000535607 A0A087X0K7 114 aa5.27□□□□□ -1.57
USP28-202ENST00000535607 TMEM189A5PLL7 270 aa5.27□□□□□ -1.57
USP28-202ENST00000535607 PPIAL4DF5H284 164 aa5.27□□□□□ -1.57
USP28-202ENST00000535607 F8W1H4 67 aa5.27□□□□□ -1.57
USP28-202ENST00000535607 H3BUT2 72 aa5.27□□□□□ -1.57
USP28-202ENST00000535607 K7EQM0 130 aa5.27□□□□□ -1.57
USP28-202ENST00000535607 IGHV3-9P01782 118 aa5.27□□□□□ -1.57
USP28-202ENST00000535607 SLC25A5P05141 298 aaKnown RBP5.27□□□□□ -1.57
USP28-202ENST00000535607 CCL2P13500 99 aa5.27□□□□□ -1.57
USP28-202ENST00000535607 ACACAQ13085 2346 aa5.27□□□□□ -1.57
USP28-202ENST00000535607 LGALS9BQ3B8N2 356 aa5.27□□□□□ -1.57
USP28-202ENST00000535607 Q5PR19 223 aa5.27□□□□□ -1.57
USP28-202ENST00000535607 SPATA31B1PQ5VZV4 182 aa5.27□□□□□ -1.57
USP28-202ENST00000535607 LGALS9CQ6DKI2 356 aa5.27□□□□□ -1.57
USP28-202ENST00000535607 SLC25A48Q6ZT89 311 aaKnown RBP5.27□□□□□ -1.57
USP28-202ENST00000535607 LHFPL4Q7Z7J7 247 aa5.27□□□□□ -1.57
USP28-202ENST00000535607 ZNF329Q86UD4 541 aa5.27□□□□□ -1.57
USP28-202ENST00000535607 GCSAMQ8N6F7 178 aa5.27□□□□□ -1.57
USP28-202ENST00000535607 TPRX1Q8N7U7 411 aa5.27□□□□□ -1.57
USP28-202ENST00000535607 FDCSPQ8NFU4 85 aa5.27□□□□□ -1.57
USP28-202ENST00000535607 OR4A5Q8NH83 315 aa5.27□□□□□ -1.57
USP28-202ENST00000535607 UBALD1Q8TB05 177 aa5.27□□□□□ -1.57
USP28-202ENST00000535607 BLNKQ8WV28 456 aa5.27□□□□□ -1.57
USP28-202ENST00000535607 ST6GALNAC6Q969X2 333 aa5.27□□□□□ -1.57
USP28-202ENST00000535607 ATP6V0BQ99437 205 aa5.27□□□□□ -1.57
USP28-202ENST00000535607 HINT2Q9BX68 163 aa5.27□□□□□ -1.57
USP28-202ENST00000535607 IFI27L2Q9H2X8 130 aa5.27□□□□□ -1.57
USP28-202ENST00000535607 FNDC4Q9H6D8 234 aaPredicted RBP5.27□□□□□ -1.57
USP28-202ENST00000535607 SIGLEC8Q9NYZ4 499 aa5.27□□□□□ -1.57
USP28-202ENST00000535607 RABAC1Q9UI14 185 aa5.27□□□□□ -1.57
USP28-202ENST00000535607 EPDR1Q9UM22 224 aa5.27□□□□□ -1.57
USP28-202ENST00000535607 KLF12Q9Y4X4 402 aa5.27□□□□□ -1.57
USP28-202ENST00000535607 ANKRD11Q6UB99 2663 aaPredicted RBP5.27□□□□□ -1.57
USP28-202ENST00000535607 SHISA9B4DS77 424 aa5.26□□□□□ -1.57
USP28-202ENST00000535607 INS-IGF2F8WCM5 200 aa5.26□□□□□ -1.57
USP28-202ENST00000535607 FRMD6-AS1P0C7T7 363 aa5.26□□□□□ -1.57
USP28-202ENST00000535607 CCL11P51671 97 aa5.26□□□□□ -1.57
USP28-202ENST00000535607 BRWD1-AS2P59051 145 aa5.26□□□□□ -1.57
USP28-202ENST00000535607 RPL24P83731 157 aaKnown RBP5.26□□□□□ -1.57
USP28-202ENST00000535607 TCTEX1D4Q5JR98 221 aa5.26□□□□□ -1.57
USP28-202ENST00000535607 FAM120AOSQ5T036 256 aa5.26□□□□□ -1.57
USP28-202ENST00000535607 LINC00696Q6ZRV3 163 aa5.26□□□□□ -1.57
USP28-202ENST00000535607 TUSC5Q8IXB3 177 aa5.26□□□□□ -1.57
USP28-202ENST00000535607 BOD1L2Q8IYS8 172 aa5.26□□□□□ -1.57
USP28-202ENST00000535607 ZADH2Q8N4Q0 377 aa5.26□□□□□ -1.57
USP28-202ENST00000535607 TEX45Q8NA69 505 aa5.26□□□□□ -1.57
USP28-202ENST00000535607 FAM222BQ8WU58 562 aa5.26□□□□□ -1.57
USP28-202ENST00000535607 NPFFR1Q9GZQ6 430 aa5.26□□□□□ -1.57
USP28-202ENST00000535607 SMPXQ9UHP9 88 aa5.26□□□□□ -1.57
USP28-202ENST00000535607 IGF2RP11717 2491 aa5.26□□□□□ -1.57
USP28-202ENST00000535607 LAMA5O15230 3695 aa5.26□□□□□ -1.57
USP28-202ENST00000535607 NCKAP5O14513 1909 aa5.26□□□□□ -1.57
USP28-202ENST00000535607 DOCK10Q96BY6 2186 aa5.26□□□□□ -1.57
USP28-202ENST00000535607 ZZEF1O43149 2961 aa5.25□□□□□ -1.57
USP28-202ENST00000535607 TRBV6-1A0A0K0K1D8 114 aa5.25□□□□□ -1.57
USP28-202ENST00000535607 A0A1B0GUT8 65 aa5.25□□□□□ -1.57
USP28-202ENST00000535607 FBLL1A6NHQ2 334 aaKnown RBP5.25□□□□□ -1.57
USP28-202ENST00000535607 USP17L23D6RBM5 183 aa5.25□□□□□ -1.57
USP28-202ENST00000535607 UPK2O00526 184 aa5.25□□□□□ -1.57
USP28-202ENST00000535607 TIMM8AO60220 97 aaPredicted RBP5.25□□□□□ -1.57
USP28-202ENST00000535607 CLEC3BP05452 202 aa5.25□□□□□ -1.57
USP28-202ENST00000535607 S100A7P31151 101 aa5.25□□□□□ -1.57
USP28-202ENST00000535607 PRDX2P32119 198 aa5.25□□□□□ -1.57
USP28-202ENST00000535607 LGALS7P47929 136 aa5.25□□□□□ -1.57
USP28-202ENST00000535607 SPINK14Q6IE38 97 aa5.25□□□□□ -1.57
USP28-202ENST00000535607 Q6ZS92 163 aa5.25□□□□□ -1.57
USP28-202ENST00000535607 MDP1Q86V88 176 aa5.25□□□□□ -1.57
USP28-202ENST00000535607 GATD1Q8NB37 220 aa5.25□□□□□ -1.57
USP28-202ENST00000535607 OR10W1Q8NGF6 305 aa5.25□□□□□ -1.57
USP28-202ENST00000535607 OR10X1Q8NGY0 326 aa5.25□□□□□ -1.57
USP28-202ENST00000535607 PIFOQ8TCI5 191 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms