RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 PRR32B1ATL7 298 aa8.74□□□□□ -1.01
COLCA1-203ENST00000532918 TOMM40O96008 361 aa8.74□□□□□ -1.01
COLCA1-203ENST00000532918 SYNJ2BPP57105 145 aa8.74□□□□□ -1.01
COLCA1-203ENST00000532918 SUPT4H1P63272 117 aaKnown RBP8.74□□□□□ -1.01
COLCA1-203ENST00000532918 SRSF1Q07955 248 aaKnown RBP eCLIP8.74□□□□□ -1.01
COLCA1-203ENST00000532918 C10orf55Q5SWW7 151 aa8.74□□□□□ -1.01
COLCA1-203ENST00000532918 SLC25A39Q9BZJ4 359 aaPredicted RBP8.74□□□□□ -1.01
COLCA1-203ENST00000532918 TICRRQ7Z2Z1 1910 aa8.74□□□□□ -1.01
COLCA1-203ENST00000532918 ZNF138P52744 262 aa8.73□□□□□ -1.01
COLCA1-203ENST00000532918 A0A0A6YYD4 124 aa8.73□□□□□ -1.01
COLCA1-203ENST00000532918 ATP5G3P48201 142 aa8.73□□□□□ -1.01
COLCA1-203ENST00000532918 Q71RC1 249 aaPredicted RBP8.73□□□□□ -1.01
COLCA1-203ENST00000532918 COQ2Q96H96 371 aa8.73□□□□□ -1.01
COLCA1-203ENST00000532918 RFNGQ9Y644 331 aa8.73□□□□□ -1.01
COLCA1-203ENST00000532918 COL4A6Q14031 1691 aa8.73□□□□□ -1.01
COLCA1-203ENST00000532918 RPL15P61313 204 aaKnown RBP8.73□□□□□ -1.01
COLCA1-203ENST00000532918 GNG5P63218 68 aa8.73□□□□□ -1.01
COLCA1-203ENST00000532918 FAM215AQ9Y5M1 114 aa8.73□□□□□ -1.01
COLCA1-203ENST00000532918 PLXNA3P51805 1871 aa8.72□□□□□ -1.01
COLCA1-203ENST00000532918 PYYP10082 97 aa8.72□□□□□ -1.01
COLCA1-203ENST00000532918 SPTBN2O15020 2390 aa8.72□□□□□ -1.01
COLCA1-203ENST00000532918 DPM2O94777 84 aa8.72□□□□□ -1.01
COLCA1-203ENST00000532918 Q6ZS49 121 aa8.72□□□□□ -1.01
COLCA1-203ENST00000532918 RNF182Q8N6D2 247 aa8.72□□□□□ -1.01
COLCA1-203ENST00000532918 NXT2Q9NPJ8 142 aaKnown RBP8.72□□□□□ -1.01
COLCA1-203ENST00000532918 TANC1Q9C0D5 1861 aa8.72□□□□□ -1.01
COLCA1-203ENST00000532918 TRAV2A0A0B4J234 112 aa8.72□□□□□ -1.01
COLCA1-203ENST00000532918 OVOL3O00110 214 aa8.72□□□□□ -1.01
COLCA1-203ENST00000532918 SRP19P09132 144 aaKnown RBP8.72□□□□□ -1.01
COLCA1-203ENST00000532918 LYPD1Q8N2G4 141 aa8.72□□□□□ -1.01
COLCA1-203ENST00000532918 ELANEP08246 267 aa8.72□□□□□ -1.01
COLCA1-203ENST00000532918 MUC21A0A0G2JKD1 596 aa8.72□□□□□ -1.01
COLCA1-203ENST00000532918 MUC21A0A140T8X8 626 aa8.72□□□□□ -1.01
COLCA1-203ENST00000532918 NDUFS6O75380 124 aaKnown RBP8.72□□□□□ -1.01
COLCA1-203ENST00000532918 FCN3O75636 299 aa8.72□□□□□ -1.01
COLCA1-203ENST00000532918 CD28P10747 220 aa8.72□□□□□ -1.01
COLCA1-203ENST00000532918 HEATR5BQ9P2D3 2071 aa8.71□□□□□ -1.01
COLCA1-203ENST00000532918 ATRAIDQ6UW56 229 aa8.71□□□□□ -1.01
COLCA1-203ENST00000532918 IGFL2Q6UWQ7 119 aa8.71□□□□□ -1.01
COLCA1-203ENST00000532918 SRRM4A7MD48 611 aaKnown RBP8.71□□□□□ -1.02
COLCA1-203ENST00000532918 TMEM86BQ8N661 226 aa8.71□□□□□ -1.02
COLCA1-203ENST00000532918 NCOR1O75376 2440 aa8.71□□□□□ -1.02
COLCA1-203ENST00000532918 CEP250Q9BV73 2442 aa8.71□□□□□ -1.02
COLCA1-203ENST00000532918 ARHGEF17Q96PE2 2063 aaPredicted RBP8.71□□□□□ -1.02
COLCA1-203ENST00000532918 FGF16O43320 207 aa8.71□□□□□ -1.02
COLCA1-203ENST00000532918 IGLV1-44P01699 117 aa8.71□□□□□ -1.02
COLCA1-203ENST00000532918 OSTCQ9NRP0 149 aa8.71□□□□□ -1.02
COLCA1-203ENST00000532918 VWA8A3KMH1 1905 aa8.71□□□□□ -1.02
COLCA1-203ENST00000532918 GAGE12BA1L429 117 aa8.71□□□□□ -1.02
COLCA1-203ENST00000532918 PMS2P5A8MQ11 134 aa8.71□□□□□ -1.02
COLCA1-203ENST00000532918 HIGD1CA8MV81 97 aa8.71□□□□□ -1.02
COLCA1-203ENST00000532918 VWC2LB2RUY7 222 aa8.71□□□□□ -1.02
COLCA1-203ENST00000532918 M0R2P5 195 aa8.71□□□□□ -1.02
COLCA1-203ENST00000532918 TEX36Q5VZQ5 186 aa8.71□□□□□ -1.02
COLCA1-203ENST00000532918 TREML4Q6UXN2 200 aa8.71□□□□□ -1.02
COLCA1-203ENST00000532918 DAD1P61803 113 aa8.7□□□□□ -1.02
COLCA1-203ENST00000532918 FOXL1Q12952 345 aa8.7□□□□□ -1.02
COLCA1-203ENST00000532918 WFDC12Q8WWY7 111 aa8.7□□□□□ -1.02
COLCA1-203ENST00000532918 DLX4Q92988 240 aaPredicted RBP8.7□□□□□ -1.02
COLCA1-203ENST00000532918 SPANXDQ9BXN6 97 aa8.7□□□□□ -1.02
COLCA1-203ENST00000532918 RLFQ13129 1914 aa8.7□□□□□ -1.02
COLCA1-203ENST00000532918 SDK2Q58EX2 2172 aa8.7□□□□□ -1.02
COLCA1-203ENST00000532918 NDUFB8O95169 186 aa8.7□□□□□ -1.02
COLCA1-203ENST00000532918 PMVKQ15126 192 aa8.7□□□□□ -1.02
COLCA1-203ENST00000532918 MST1LQ2TV78 715 aa8.7□□□□□ -1.02
COLCA1-203ENST00000532918 C2orf82Q6UX34 121 aa8.7□□□□□ -1.02
COLCA1-203ENST00000532918 HIST1H2BLQ99880 126 aa8.7□□□□□ -1.02
COLCA1-203ENST00000532918 SIP14410 1827 aa8.7□□□□□ -1.02
COLCA1-203ENST00000532918 HIST1H2BKO60814 126 aa8.7□□□□□ -1.02
COLCA1-203ENST00000532918 HIST1H2BJP06899 126 aa8.7□□□□□ -1.02
COLCA1-203ENST00000532918 HIST1H2BOP23527 126 aa8.7□□□□□ -1.02
COLCA1-203ENST00000532918 HIST1H2BBP33778 126 aa8.7□□□□□ -1.02
COLCA1-203ENST00000532918 HIST1H2BDP58876 126 aa8.7□□□□□ -1.02
COLCA1-203ENST00000532918 HIST1H2BCP62807 126 aa8.7□□□□□ -1.02
COLCA1-203ENST00000532918 NDPQ00604 133 aa8.7□□□□□ -1.02
COLCA1-203ENST00000532918 HIST2H2BEQ16778 126 aa8.7□□□□□ -1.02
COLCA1-203ENST00000532918 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.7□□□□□ -1.02
COLCA1-203ENST00000532918 C1orf194Q5T5A4 169 aa8.7□□□□□ -1.02
COLCA1-203ENST00000532918 FAM90A2PQ658T7 463 aa8.7□□□□□ -1.02
COLCA1-203ENST00000532918 HIST1H2BHQ93079 126 aa8.7□□□□□ -1.02
COLCA1-203ENST00000532918 UBE2E2Q96LR5 201 aa8.7□□□□□ -1.02
COLCA1-203ENST00000532918 HIST1H2BNQ99877 126 aa8.7□□□□□ -1.02
COLCA1-203ENST00000532918 HIST1H2BMQ99879 126 aa8.7□□□□□ -1.02
COLCA1-203ENST00000532918 ATP6V0E1O15342 81 aa8.7□□□□□ -1.02
COLCA1-203ENST00000532918 DEFB131AP59861 70 aa8.7□□□□□ -1.02
COLCA1-203ENST00000532918 KLF17Q5JT82 389 aaPredicted RBP8.7□□□□□ -1.02
COLCA1-203ENST00000532918 HAPLN4Q86UW8 402 aa8.7□□□□□ -1.02
COLCA1-203ENST00000532918 KLF12Q9Y4X4 402 aa8.7□□□□□ -1.02
COLCA1-203ENST00000532918 ANK1P16157 1881 aa8.7□□□□□ -1.02
COLCA1-203ENST00000532918 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.69□□□□□ -1.02
COLCA1-203ENST00000532918 HBDP02042 147 aa8.69□□□□□ -1.02
COLCA1-203ENST00000532918 Q5BKY6 102 aa8.69□□□□□ -1.02
COLCA1-203ENST00000532918 MRPL55Q7Z7F7 128 aaKnown RBP8.69□□□□□ -1.02
COLCA1-203ENST00000532918 PROK2Q9HC23 129 aa8.69□□□□□ -1.02
COLCA1-203ENST00000532918 FNDC10F2Z333 226 aa8.69□□□□□ -1.02
COLCA1-203ENST00000532918 F8VVB4 439 aa8.69□□□□□ -1.02
COLCA1-203ENST00000532918 F8VWA3 439 aa8.69□□□□□ -1.02
COLCA1-203ENST00000532918 C1orf122Q6ZSJ8 110 aa8.69□□□□□ -1.02
COLCA1-203ENST00000532918 IGLV3-9A0A075B6K5 115 aa8.69□□□□□ -1.02
COLCA1-203ENST00000532918 IGKV1D-8A0A087WSZ0 117 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms