RNA–Protein interactions for RNA: ENST00000532844.5

CTNND1-234, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-234ENST00000532844 SYNJ2BPP57105 145 aa6.69□□□□□ -1.34
CTNND1-234ENST00000532844 TEX43Q6ZNM6 134 aa6.69□□□□□ -1.34
CTNND1-234ENST00000532844 OCC1Q8TAD7 63 aa6.69□□□□□ -1.34
CTNND1-234ENST00000532844 MBNL3Q9NUK0 354 aaKnown RBP6.69□□□□□ -1.34
CTNND1-234ENST00000532844 LYNX1G3V0Z9 82 aa6.68□□□□□ -1.34
CTNND1-234ENST00000532844 DUSP14O95147 198 aaKnown RBP6.68□□□□□ -1.34
CTNND1-234ENST00000532844 LYNX1P0DP58 116 aa6.68□□□□□ -1.34
CTNND1-234ENST00000532844 C6orf226Q5I0X4 101 aa6.68□□□□□ -1.34
CTNND1-234ENST00000532844 RNF144BQ7Z419 303 aa6.68□□□□□ -1.34
CTNND1-234ENST00000532844 SMIM20Q8N5G0 67 aa6.68□□□□□ -1.34
CTNND1-234ENST00000532844 RNF125Q96EQ8 232 aa6.68□□□□□ -1.34
CTNND1-234ENST00000532844 B5MCH6 92 aa6.68□□□□□ -1.34
CTNND1-234ENST00000532844 GNLYP22749 145 aa6.68□□□□□ -1.34
CTNND1-234ENST00000532844 IGHG3P01860 377 aa6.68□□□□□ -1.34
CTNND1-234ENST00000532844 Q0VFX4 171 aa6.68□□□□□ -1.34
CTNND1-234ENST00000532844 NEGR1Q7Z3B1 354 aa6.68□□□□□ -1.34
CTNND1-234ENST00000532844 TMEM242Q9NWH2 141 aa6.68□□□□□ -1.34
CTNND1-234ENST00000532844 CSRP1P21291 193 aaKnown RBP6.68□□□□□ -1.34
CTNND1-234ENST00000532844 WDR83OSQ9Y284 106 aa6.68□□□□□ -1.34
CTNND1-234ENST00000532844 RPRMLQ8N4K4 120 aa6.67□□□□□ -1.34
CTNND1-234ENST00000532844 PSG8Q9UQ74 426 aa6.67□□□□□ -1.34
CTNND1-234ENST00000532844 F8W1H4 67 aa6.67□□□□□ -1.34
CTNND1-234ENST00000532844 CXCL1P09341 107 aa6.67□□□□□ -1.34
CTNND1-234ENST00000532844 TREML4Q6UXN2 200 aa6.67□□□□□ -1.34
CTNND1-234ENST00000532844 C17orf82Q86X59 251 aaPredicted RBP6.67□□□□□ -1.34
CTNND1-234ENST00000532844 DMRTC2Q8IXT2 367 aaPredicted RBP6.67□□□□□ -1.34
CTNND1-234ENST00000532844 A0A1W2PPI3 338 aa6.67□□□□□ -1.34
CTNND1-234ENST00000532844 GAGE12HA6NDE8 117 aa6.67□□□□□ -1.34
CTNND1-234ENST00000532844 COLCA2A8K830 154 aa6.67□□□□□ -1.34
CTNND1-234ENST00000532844 CD59P13987 128 aa6.67□□□□□ -1.34
CTNND1-234ENST00000532844 SLAQ13239 276 aa6.67□□□□□ -1.34
CTNND1-234ENST00000532844 TEX38Q6PEX7 206 aa6.67□□□□□ -1.34
CTNND1-234ENST00000532844 GLMPQ8WWB7 406 aa6.67□□□□□ -1.34
CTNND1-234ENST00000532844 HGFACQ04756 655 aa6.67□□□□□ -1.34
CTNND1-234ENST00000532844 SPATA31B1PQ5VZV4 182 aa6.67□□□□□ -1.34
CTNND1-234ENST00000532844 SLC25A48Q6ZT89 311 aaKnown RBP6.67□□□□□ -1.34
CTNND1-234ENST00000532844 C5orf24Q7Z6I8 188 aa6.67□□□□□ -1.34
CTNND1-234ENST00000532844 BAALCQ8WXS3 180 aa6.67□□□□□ -1.34
CTNND1-234ENST00000532844 SBF1O95248 1867 aa6.67□□□□□ -1.34
CTNND1-234ENST00000532844 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.67□□□□□ -1.34
CTNND1-234ENST00000532844 FAM231BA6NCW3 169 aa6.67□□□□□ -1.34
CTNND1-234ENST00000532844 MMP23AO75900 390 aa6.67□□□□□ -1.34
CTNND1-234ENST00000532844 EGR2P11161 476 aaPredicted RBP6.67□□□□□ -1.34
CTNND1-234ENST00000532844 QRFPP83859 136 aa6.67□□□□□ -1.34
CTNND1-234ENST00000532844 SPACA3Q8IXA5 215 aa6.67□□□□□ -1.34
CTNND1-234ENST00000532844 THBDP07204 575 aa6.66□□□□□ -1.34
CTNND1-234ENST00000532844 WNT2P09544 360 aa6.66□□□□□ -1.34
CTNND1-234ENST00000532844 PRB4P10163 310 aaPredicted RBP6.66□□□□□ -1.34
CTNND1-234ENST00000532844 PRIMA1Q86XR5 153 aa6.66□□□□□ -1.34
CTNND1-234ENST00000532844 DTX1Q86Y01 620 aa6.66□□□□□ -1.34
CTNND1-234ENST00000532844 RFNGQ9Y644 331 aa6.66□□□□□ -1.34
CTNND1-234ENST00000532844 DOCK6Q96HP0 2047 aa6.66□□□□□ -1.34
CTNND1-234ENST00000532844 CHKB-CPT1BH3BT56 60 aa6.66□□□□□ -1.34
CTNND1-234ENST00000532844 TIMM23O14925 209 aa6.66□□□□□ -1.34
CTNND1-234ENST00000532844 ZC2HC1BQ5TFG8 222 aa6.66□□□□□ -1.34
CTNND1-234ENST00000532844 CD177Q8N6Q3 437 aa6.66□□□□□ -1.34
CTNND1-234ENST00000532844 LSM4Q9Y4Z0 139 aaKnown RBP6.66□□□□□ -1.34
CTNND1-234ENST00000532844 C3orf79P0CE67 100 aa6.66□□□□□ -1.34
CTNND1-234ENST00000532844 PPIFP30405 207 aaKnown RBP6.66□□□□□ -1.34
CTNND1-234ENST00000532844 ETDBQ3ZM63 59 aa6.66□□□□□ -1.34
CTNND1-234ENST00000532844 ZNF581Q9P0T4 197 aa6.66□□□□□ -1.34
CTNND1-234ENST00000532844 CABIN1Q9Y6J0 2220 aa6.66□□□□□ -1.34
CTNND1-234ENST00000532844 RP1P56715 2156 aa6.66□□□□□ -1.34
CTNND1-234ENST00000532844 PSPNO60542 156 aa6.66□□□□□ -1.34
CTNND1-234ENST00000532844 RPL35AP18077 110 aaKnown RBP6.66□□□□□ -1.34
CTNND1-234ENST00000532844 FAM110DQ8TAY7 271 aaPredicted RBP6.66□□□□□ -1.34
CTNND1-234ENST00000532844 THSD7BQ9C0I4 1608 aa6.66□□□□□ -1.34
CTNND1-234ENST00000532844 ZNF318Q5VUA4 2279 aa6.66□□□□□ -1.34
CTNND1-234ENST00000532844 A0A1B0GW64 132 aa6.66□□□□□ -1.34
CTNND1-234ENST00000532844 SYS1-DBNDD2H3BUS1 97 aa6.66□□□□□ -1.34
CTNND1-234ENST00000532844 AZU1P20160 251 aa6.66□□□□□ -1.34
CTNND1-234ENST00000532844 TIMP3P35625 211 aa6.66□□□□□ -1.34
CTNND1-234ENST00000532844 GATA4P43694 442 aa6.66□□□□□ -1.34
CTNND1-234ENST00000532844 ZNF876PQ49A33 203 aa6.66□□□□□ -1.34
CTNND1-234ENST00000532844 SP5Q6BEB4 398 aaPredicted RBP6.66□□□□□ -1.34
CTNND1-234ENST00000532844 RNF166Q96A37 237 aaPredicted RBP6.66□□□□□ -1.34
CTNND1-234ENST00000532844 TIMM21Q9BVV7 248 aa6.66□□□□□ -1.34
CTNND1-234ENST00000532844 C1QTNF4Q9BXJ3 329 aa6.66□□□□□ -1.34
CTNND1-234ENST00000532844 NBL1P41271 181 aa6.65□□□□□ -1.34
CTNND1-234ENST00000532844 TCF15Q12870 199 aa6.65□□□□□ -1.34
CTNND1-234ENST00000532844 NMSQ5H8A3 153 aa6.65□□□□□ -1.34
CTNND1-234ENST00000532844 C20orf204Q6ZNR8 217 aa6.65□□□□□ -1.34
CTNND1-234ENST00000532844 SRRM5B3KS81 715 aa6.65□□□□□ -1.34
CTNND1-234ENST00000532844 J3KT08 172 aa6.65□□□□□ -1.34
CTNND1-234ENST00000532844 IL18BPO95998 194 aa6.65□□□□□ -1.34
CTNND1-234ENST00000532844 IGKV1-5P01602 117 aa6.65□□□□□ -1.34
CTNND1-234ENST00000532844 COL4A6Q14031 1691 aa6.65□□□□□ -1.34
CTNND1-234ENST00000532844 TRAV13-1A0A0B4J241 112 aa6.65□□□□□ -1.35
CTNND1-234ENST00000532844 KNCNA6PVL3 124 aa6.65□□□□□ -1.35
CTNND1-234ENST00000532844 D6R8Y8 96 aa6.65□□□□□ -1.35
CTNND1-234ENST00000532844 K7EP13 123 aa6.65□□□□□ -1.35
CTNND1-234ENST00000532844 TMEM200BQ69YZ2 307 aa6.65□□□□□ -1.35
CTNND1-234ENST00000532844 LCN12Q6JVE5 192 aa6.65□□□□□ -1.35
CTNND1-234ENST00000532844 TRAV3A0A0B4J244 114 aa6.65□□□□□ -1.35
CTNND1-234ENST00000532844 TRAV12-1A0A0B4J245 112 aa6.65□□□□□ -1.35
CTNND1-234ENST00000532844 VWA8A3KMH1 1905 aa6.65□□□□□ -1.35
CTNND1-234ENST00000532844 IGHV2-26A0A0B4J1V2 119 aa6.64□□□□□ -1.35
CTNND1-234ENST00000532844 CRYBA4P53673 196 aa6.64□□□□□ -1.35
CTNND1-234ENST00000532844 PYY3Q5JQD4 70 aa6.64□□□□□ -1.35
CTNND1-234ENST00000532844 C10orf55Q5SWW7 151 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms