RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 HOXD3P31249 432 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-221ENST00000531582 DSCR4P56555 118 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-221ENST00000531582 CLDN17P56750 224 aa3.8□□□□□ -1.8
ECHDC1-221ENST00000531582 PROK1P58294 105 aa3.8□□□□□ -1.8
ECHDC1-221ENST00000531582 SRSF9Q13242 221 aaKnown RBP eCLIP3.8□□□□□ -1.8
ECHDC1-221ENST00000531582 RTL8BQ17RB0 113 aa3.8□□□□□ -1.8
ECHDC1-221ENST00000531582 C12orf74Q32Q52 190 aa3.8□□□□□ -1.8
ECHDC1-221ENST00000531582 C1orf100Q5SVJ3 147 aa3.8□□□□□ -1.8
ECHDC1-221ENST00000531582 FAM120AOSQ5T036 256 aa3.8□□□□□ -1.8
ECHDC1-221ENST00000531582 TMEM170BQ5T4T1 132 aa3.8□□□□□ -1.8
ECHDC1-221ENST00000531582 MMD2Q8IY49 270 aa3.8□□□□□ -1.8
ECHDC1-221ENST00000531582 OR5C1Q8NGR4 320 aa3.8□□□□□ -1.8
ECHDC1-221ENST00000531582 C18orf12Q96KH6 178 aa3.8□□□□□ -1.8
ECHDC1-221ENST00000531582 CHCHD5Q9BSY4 110 aa3.8□□□□□ -1.8
ECHDC1-221ENST00000531582 PDFQ9HBH1 243 aa3.8□□□□□ -1.8
ECHDC1-221ENST00000531582 ZNF331Q9NQX6 463 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-221ENST00000531582 OARD1Q9Y530 152 aa3.8□□□□□ -1.8
ECHDC1-221ENST00000531582 HILPDAQ9Y5L2 63 aa3.8□□□□□ -1.8
ECHDC1-221ENST00000531582 TRBV19A0A075B6N1 114 aa3.79□□□□□ -1.8
ECHDC1-221ENST00000531582 TRBV7-6A0A0J9YX20 115 aa3.79□□□□□ -1.8
ECHDC1-221ENST00000531582 A0A1B0GTH9 108 aa3.79□□□□□ -1.8
ECHDC1-221ENST00000531582 TCRBV4S1A1TA0A5B7 111 aa3.79□□□□□ -1.8
ECHDC1-221ENST00000531582 C1orf105O95561 183 aa3.79□□□□□ -1.8
ECHDC1-221ENST00000531582 P01737 135 aa3.79□□□□□ -1.8
ECHDC1-221ENST00000531582 IL4P05112 153 aa3.79□□□□□ -1.8
ECHDC1-221ENST00000531582 ASAH2BP0C7U1 165 aa3.79□□□□□ -1.8
ECHDC1-221ENST00000531582 GP1BBP13224 206 aa3.79□□□□□ -1.8
ECHDC1-221ENST00000531582 HLA-DOBP13765 273 aa3.79□□□□□ -1.8
ECHDC1-221ENST00000531582 CTLA4P16410 223 aa3.79□□□□□ -1.8
ECHDC1-221ENST00000531582 FKBP2P26885 142 aaKnown RBP3.79□□□□□ -1.8
ECHDC1-221ENST00000531582 MAGEA5P43359 124 aa3.79□□□□□ -1.8
ECHDC1-221ENST00000531582 NPC2P61916 151 aa3.79□□□□□ -1.8
ECHDC1-221ENST00000531582 UBE2L3P68036 154 aaKnown RBP3.79□□□□□ -1.8
ECHDC1-221ENST00000531582 QRFPP83859 136 aa3.79□□□□□ -1.8
ECHDC1-221ENST00000531582 FAM27E3Q08E93 113 aa3.79□□□□□ -1.8
ECHDC1-221ENST00000531582 ARL16Q0P5N6 197 aa3.79□□□□□ -1.8
ECHDC1-221ENST00000531582 ARFRP1Q13795 201 aa3.79□□□□□ -1.8
ECHDC1-221ENST00000531582 LCN10Q6JVE6 187 aa3.79□□□□□ -1.8
ECHDC1-221ENST00000531582 DGAT2L6Q6ZPD8 337 aa3.79□□□□□ -1.8
ECHDC1-221ENST00000531582 HMGN2P46Q86SG4 172 aa3.79□□□□□ -1.8
ECHDC1-221ENST00000531582 NABP1Q96AH0 204 aa3.79□□□□□ -1.8
ECHDC1-221ENST00000531582 BORCS8Q96FH0 119 aa3.79□□□□□ -1.8
ECHDC1-221ENST00000531582 FAM60AQ9NP50 221 aa3.79□□□□□ -1.8
ECHDC1-221ENST00000531582 OCIAD1Q9NX40 245 aa3.79□□□□□ -1.8
ECHDC1-221ENST00000531582 Q9UF83 564 aa3.79□□□□□ -1.8
ECHDC1-221ENST00000531582 PTPRSQ13332 1948 aa3.79□□□□□ -1.8
ECHDC1-221ENST00000531582 SMCHD1A6NHR9 2005 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 TRGV5A0A0B4J1U4 118 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 TRAV17A0A0B4J275 112 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 SMIM27A0A1W2PRY6 76 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 C11orf94C9JXX5 98 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 H3BT86 120 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 K7EM74 188 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 M0QZQ0 153 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 PRYO14603 147 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 TIMM23O14925 209 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 SLC25A14O95258 325 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 PPYP01298 95 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 NPYP01303 97 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 CXCL8P10145 99 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 GCHFRP30047 84 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 RPL34P49207 117 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 DYNLT3P51808 116 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 FXYD2P54710 66 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 UBE2D3P61077 147 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 UBE2D2P62837 147 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 CCL8P80075 99 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 SRYQ05066 204 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 MLF2Q15773 248 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 DEFB121Q5J5C9 76 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 FAM219BQ5XKK7 198 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 ZNF493Q6ZR52 646 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 PDPNQ86YL7 162 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 CLECL1Q8IZS7 167 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 LINC00311Q8N616 119 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 OR52N5Q8NH56 324 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 FMC1Q96HJ9 113 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 FAM19A4Q96LR4 140 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 C2orf48Q96LS8 159 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 ODF3Q96PU9 254 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 FOXC2Q99958 501 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 KXD1Q9BQD3 176 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 EMC6Q9BV81 110 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 SRXN1Q9BYN0 137 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 NHP2Q9NX24 153 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 RNF7Q9UBF6 113 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 C19orf25Q9UFG5 118 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 TDRD6O60522 2096 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 MDC1Q14676 2089 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 PCNX3Q9H6A9 2034 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 THADAQ6YHU6 1953 aa3.78□□□□□ -1.8
ECHDC1-221ENST00000531582 MYMXA0A1B0GTQ4 84 aa3.77□□□□□ -1.81
ECHDC1-221ENST00000531582 C17orf51A8MQB3 221 aa3.77□□□□□ -1.81
ECHDC1-221ENST00000531582 CDX4O14627 284 aaPredicted RBP3.77□□□□□ -1.81
ECHDC1-221ENST00000531582 BUB3O43684 328 aa3.77□□□□□ -1.81
ECHDC1-221ENST00000531582 GFERP55789 205 aa3.77□□□□□ -1.81
ECHDC1-221ENST00000531582 ATP5EP56381 51 aaPredicted RBP3.77□□□□□ -1.81
ECHDC1-221ENST00000531582 FBXW4P57775 412 aa3.77□□□□□ -1.81
ECHDC1-221ENST00000531582 HIST1H4AP62805 103 aaKnown RBP3.77□□□□□ -1.81
ECHDC1-221ENST00000531582 RPL18AQ02543 176 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms