RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 A0A1B0GUT8 65 aa11.34□□□□□ -0.59
PCF11-204ENST00000530660 D6R8Y8 96 aa11.34□□□□□ -0.59
PCF11-204ENST00000530660 ZNF134P52741 427 aa11.34□□□□□ -0.59
PCF11-204ENST00000530660 CT83Q5H943 113 aa11.34□□□□□ -0.59
PCF11-204ENST00000530660 ZNF766Q5HY98 468 aa11.34□□□□□ -0.59
PCF11-204ENST00000530660 GTSCR1Q86UQ5 136 aa11.34□□□□□ -0.59
PCF11-204ENST00000530660 LEAP2Q969E1 77 aa11.34□□□□□ -0.59
PCF11-204ENST00000530660 FAM173AQ9BQD7 235 aa11.34□□□□□ -0.59
PCF11-204ENST00000530660 RTL8AQ9BWD3 113 aa11.34□□□□□ -0.59
PCF11-204ENST00000530660 MRPL32Q9BYC8 188 aaKnown RBP11.34□□□□□ -0.59
PCF11-204ENST00000530660 TMEM14BQ9NUH8 114 aa11.34□□□□□ -0.59
PCF11-204ENST00000530660 CFAP47Q6ZTR5 3102 aa11.33□□□□□ -0.6
PCF11-204ENST00000530660 TRBV20-1A0A075B6N2 111 aa11.33□□□□□ -0.6
PCF11-204ENST00000530660 NDUFS7O75251 213 aa11.33□□□□□ -0.6
PCF11-204ENST00000530660 FLYWCH2Q96CP2 140 aaKnown RBP11.33□□□□□ -0.6
PCF11-204ENST00000530660 CCDC179H3BU77 68 aa11.33□□□□□ -0.6
PCF11-204ENST00000530660 RBP4P02753 201 aa11.33□□□□□ -0.6
PCF11-204ENST00000530660 C10orf113Q5VZT2 155 aa11.33□□□□□ -0.6
PCF11-204ENST00000530660 PDPNQ86YL7 162 aa11.33□□□□□ -0.6
PCF11-204ENST00000530660 Q8IYB0 196 aa11.33□□□□□ -0.6
PCF11-204ENST00000530660 GFRA4Q9GZZ7 299 aa11.33□□□□□ -0.6
PCF11-204ENST00000530660 PLXNB1O43157 2135 aa11.32□□□□□ -0.6
PCF11-204ENST00000530660 MYCNOSP40205 109 aa11.32□□□□□ -0.6
PCF11-204ENST00000530660 TUSC5Q8IXB3 177 aa11.32□□□□□ -0.6
PCF11-204ENST00000530660 PI4KAP42356 2102 aa11.32□□□□□ -0.6
PCF11-204ENST00000530660 ID1P41134 155 aa11.32□□□□□ -0.6
PCF11-204ENST00000530660 ODF1Q14990 250 aa11.32□□□□□ -0.6
PCF11-204ENST00000530660 RRN3P1Q2M238 152 aa11.32□□□□□ -0.6
PCF11-204ENST00000530660 ZFAND6Q6FIF0 208 aa11.32□□□□□ -0.6
PCF11-204ENST00000530660 KIR2DL4Q99706 377 aa11.32□□□□□ -0.6
PCF11-204ENST00000530660 HHLA3Q9XRX5 114 aa11.32□□□□□ -0.6
PCF11-204ENST00000530660 KLF12Q9Y4X4 402 aa11.32□□□□□ -0.6
PCF11-204ENST00000530660 TNFRSF18Q9Y5U5 241 aa11.32□□□□□ -0.6
PCF11-204ENST00000530660 HBDP02042 147 aa11.32□□□□□ -0.6
PCF11-204ENST00000530660 DIAPH2-AS1Q14236 149 aa11.32□□□□□ -0.6
PCF11-204ENST00000530660 SRSF12Q8WXF0 261 aaKnown RBP11.32□□□□□ -0.6
PCF11-204ENST00000530660 WI2-2373I1.2A0A1W2PRP0 233 aa11.31□□□□□ -0.6
PCF11-204ENST00000530660 SPINT2O43291 252 aa11.31□□□□□ -0.6
PCF11-204ENST00000530660 TEX29Q8N6K0 151 aa11.31□□□□□ -0.6
PCF11-204ENST00000530660 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.31□□□□□ -0.6
PCF11-204ENST00000530660 FOXA2Q9Y261 457 aaPredicted RBP11.31□□□□□ -0.6
PCF11-204ENST00000530660 CEP290O15078 2479 aa11.31□□□□□ -0.6
PCF11-204ENST00000530660 PINLYPA6NC86 204 aa11.3□□□□□ -0.6
PCF11-204ENST00000530660 OR10X1Q8NGY0 326 aa11.3□□□□□ -0.6
PCF11-204ENST00000530660 CARD19Q96LW7 228 aa11.3□□□□□ -0.6
PCF11-204ENST00000530660 CFAP126Q5VTH2 177 aa11.3□□□□□ -0.6
PCF11-204ENST00000530660 MAPKAPK5-AS1Q8N8E1 139 aa11.3□□□□□ -0.6
PCF11-204ENST00000530660 SMRP1Q8NCR6 262 aa11.3□□□□□ -0.6
PCF11-204ENST00000530660 ZNF492Q9P255 531 aa11.3□□□□□ -0.6
PCF11-204ENST00000530660 PLGLB1Q02325 96 aa11.3□□□□□ -0.6
PCF11-204ENST00000530660 PLP2Q04941 152 aa11.3□□□□□ -0.6
PCF11-204ENST00000530660 LINC00305Q7Z4B0 112 aa11.3□□□□□ -0.6
PCF11-204ENST00000530660 C15orf65H3BRN8 121 aa11.29□□□□□ -0.6
PCF11-204ENST00000530660 HARBI1Q96MB7 349 aa11.29□□□□□ -0.6
PCF11-204ENST00000530660 PRNDQ9UKY0 176 aa11.29□□□□□ -0.6
PCF11-204ENST00000530660 SMKR1H3BMG3 65 aa11.29□□□□□ -0.6
PCF11-204ENST00000530660 AMN1Q8IY45 258 aa11.29□□□□□ -0.6
PCF11-204ENST00000530660 IFI27L2Q9H2X8 130 aa11.29□□□□□ -0.6
PCF11-204ENST00000530660 DCHS1Q96JQ0 3298 aa11.29□□□□□ -0.6
PCF11-204ENST00000530660 TMSB15BA0A087X1C1 80 aa11.29□□□□□ -0.6
PCF11-204ENST00000530660 CT45A10P0DMU9 189 aa11.29□□□□□ -0.6
PCF11-204ENST00000530660 PRNTQ86SH4 94 aa11.29□□□□□ -0.6
PCF11-204ENST00000530660 DSPP15924 2871 aaKnown RBP11.28□□□□□ -0.6
PCF11-204ENST00000530660 FSTL3O95633 263 aa11.28□□□□□ -0.6
PCF11-204ENST00000530660 ORM2P19652 201 aa11.28□□□□□ -0.6
PCF11-204ENST00000530660 PRTN3P24158 256 aa11.28□□□□□ -0.6
PCF11-204ENST00000530660 CD69Q07108 199 aa11.28□□□□□ -0.6
PCF11-204ENST00000530660 RIGQ13278 110 aa11.28□□□□□ -0.6
PCF11-204ENST00000530660 SLC25A48Q6ZT89 311 aaKnown RBP11.28□□□□□ -0.6
PCF11-204ENST00000530660 AHCTF1Q8WYP5 2266 aa11.28□□□□□ -0.6
PCF11-204ENST00000530660 WDFY4Q6ZS81 3184 aa11.28□□□□□ -0.6
PCF11-204ENST00000530660 LTBRP36941 435 aa11.28□□□□□ -0.6
PCF11-204ENST00000530660 ZC2HC1BQ5TFG8 222 aa11.28□□□□□ -0.6
PCF11-204ENST00000530660 HIST1H4GQ99525 98 aa11.28□□□□□ -0.6
PCF11-204ENST00000530660 TMEM213A2RRL7 107 aa11.27□□□□□ -0.6
PCF11-204ENST00000530660 TCRAP04437 139 aa11.27□□□□□ -0.6
PCF11-204ENST00000530660 GAGE12JA6NER3 117 aa11.27□□□□□ -0.61
PCF11-204ENST00000530660 ZNF785A8K8V0 405 aa11.27□□□□□ -0.61
PCF11-204ENST00000530660 GAGE7O76087 117 aa11.27□□□□□ -0.61
PCF11-204ENST00000530660 GAGE12FP0CL80 117 aa11.27□□□□□ -0.61
PCF11-204ENST00000530660 GAGE12GP0CL81 117 aa11.27□□□□□ -0.61
PCF11-204ENST00000530660 GAGE12IP0CL82 117 aa11.27□□□□□ -0.61
PCF11-204ENST00000530660 GAGE4Q13068 117 aa11.27□□□□□ -0.61
PCF11-204ENST00000530660 FMC1Q96HJ9 113 aa11.27□□□□□ -0.61
PCF11-204ENST00000530660 AJUBAQ96IF1 538 aa11.27□□□□□ -0.61
PCF11-204ENST00000530660 DSCAML1Q8TD84 2053 aa11.27□□□□□ -0.61
PCF11-204ENST00000530660 SCGB2A1O75556 95 aa11.27□□□□□ -0.61
PCF11-204ENST00000530660 RNASE2P10153 161 aaKnown RBP11.27□□□□□ -0.61
PCF11-204ENST00000530660 ARL3P36405 182 aa11.27□□□□□ -0.61
PCF11-204ENST00000530660 PAX8Q06710 450 aa11.27□□□□□ -0.61
PCF11-204ENST00000530660 NPIPB3Q92617 1050 aa11.27□□□□□ -0.61
PCF11-204ENST00000530660 DLL1O00548 723 aa11.26□□□□□ -0.61
PCF11-204ENST00000530660 PRSS1P07477 247 aa11.26□□□□□ -0.61
PCF11-204ENST00000530660 MORN3Q6PF18 240 aaPredicted RBP11.26□□□□□ -0.61
PCF11-204ENST00000530660 ZNF714Q96N38 554 aa11.26□□□□□ -0.61
PCF11-204ENST00000530660 PSMB2P49721 201 aa11.26□□□□□ -0.61
PCF11-204ENST00000530660 MOGAT3Q86VF5 341 aa11.26□□□□□ -0.61
PCF11-204ENST00000530660 FAM90A1Q86YD7 464 aa11.26□□□□□ -0.61
PCF11-204ENST00000530660 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.26□□□□□ -0.61
PCF11-204ENST00000530660 ATP6V0E2Q8NHE4 81 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms