RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 Q8N2B8 174 aa2.59□□□□□ -1.99
CAPRIN1-208ENST00000530008 ST6GALNAC3Q8NDV1 305 aa2.59□□□□□ -1.99
CAPRIN1-208ENST00000530008 SBF1O95248 1867 aa2.58□□□□□ -2
CAPRIN1-208ENST00000530008 B4DSR2 109 aa2.58□□□□□ -2
CAPRIN1-208ENST00000530008 RNASE3P12724 160 aaKnown RBP2.58□□□□□ -2
CAPRIN1-208ENST00000530008 RPL35P42766 123 aaKnown RBP2.58□□□□□ -2
CAPRIN1-208ENST00000530008 RAB4BP61018 213 aa2.58□□□□□ -2
CAPRIN1-208ENST00000530008 EIF3IQ13347 325 aaKnown RBP2.58□□□□□ -2
CAPRIN1-208ENST00000530008 OR5D16Q8NGK9 328 aa2.58□□□□□ -2
CAPRIN1-208ENST00000530008 ZNF563Q8TA94 476 aa2.58□□□□□ -2
CAPRIN1-208ENST00000530008 CHCHD1Q96BP2 118 aaKnown RBP2.58□□□□□ -2
CAPRIN1-208ENST00000530008 MED31Q9Y3C7 131 aa2.58□□□□□ -2
CAPRIN1-208ENST00000530008 MYH2Q9UKX2 1941 aa2.58□□□□□ -2
CAPRIN1-208ENST00000530008 HIVEP2P31629 2446 aa2.57□□□□□ -2
CAPRIN1-208ENST00000530008 GBF1Q92538 1859 aa2.57□□□□□ -2
CAPRIN1-208ENST00000530008 OR10J4P0C629 311 aa2.57□□□□□ -2
CAPRIN1-208ENST00000530008 KLRD1Q13241 179 aa2.57□□□□□ -2
CAPRIN1-208ENST00000530008 C12orf29Q8N999 325 aa2.57□□□□□ -2
CAPRIN1-208ENST00000530008 TMEM254Q8TBM7 123 aa2.57□□□□□ -2
CAPRIN1-208ENST00000530008 NAA38Q9BRA0 125 aaKnown RBP2.57□□□□□ -2
CAPRIN1-208ENST00000530008 REG4Q9BYZ8 158 aa2.57□□□□□ -2
CAPRIN1-208ENST00000530008 SOX21Q9Y651 276 aaPredicted RBP2.57□□□□□ -2
CAPRIN1-208ENST00000530008 MYH3P11055 1940 aa2.57□□□□□ -2
CAPRIN1-208ENST00000530008 C17orf112F2Z3M2 114 aa2.56□□□□□ -2
CAPRIN1-208ENST00000530008 J3QKU1 62 aa2.56□□□□□ -2
CAPRIN1-208ENST00000530008 ALX1Q15699 326 aa2.56□□□□□ -2
CAPRIN1-208ENST00000530008 CLECL1Q8IZS7 167 aa2.56□□□□□ -2
CAPRIN1-208ENST00000530008 C15orf53Q8NAA6 179 aa2.56□□□□□ -2
CAPRIN1-208ENST00000530008 TMEM35BQ8NCS4 154 aa2.56□□□□□ -2
CAPRIN1-208ENST00000530008 POP5Q969H6 163 aaKnown RBP2.56□□□□□ -2
CAPRIN1-208ENST00000530008 TCEAL2Q9H3H9 227 aaPredicted RBP2.56□□□□□ -2
CAPRIN1-208ENST00000530008 BATF3Q9NR55 127 aa2.56□□□□□ -2
CAPRIN1-208ENST00000530008 TRAPPC2LQ9UL33 140 aa2.56□□□□□ -2
CAPRIN1-208ENST00000530008 COL5A3P25940 1745 aaPredicted RBP2.56□□□□□ -2
CAPRIN1-208ENST00000530008 LOC105371267A0A1B0GV96 52 aa2.55□□□□□ -2
CAPRIN1-208ENST00000530008 MYH7BA7E2Y1 1941 aa2.55□□□□□ -2
CAPRIN1-208ENST00000530008 BCL9O00512 1426 aa2.55□□□□□ -2
CAPRIN1-208ENST00000530008 KPNA4O00629 521 aaPredicted RBP2.55□□□□□ -2
CAPRIN1-208ENST00000530008 MRPS14O60783 128 aaKnown RBP2.55□□□□□ -2
CAPRIN1-208ENST00000530008 IGLV1-51P01701 117 aa2.55□□□□□ -2
CAPRIN1-208ENST00000530008 FABP2P12104 132 aa2.55□□□□□ -2
CAPRIN1-208ENST00000530008 RPS3P23396 243 aaKnown RBP eCLIP2.55□□□□□ -22e-6■■□□□ 11.9
CAPRIN1-208ENST00000530008 CDK5R1Q15078 307 aa2.55□□□□□ -2
CAPRIN1-208ENST00000530008 DOCK4Q8N1I0 1966 aa2.55□□□□□ -2
CAPRIN1-208ENST00000530008 OR5D14Q8NGL3 314 aa2.55□□□□□ -2
CAPRIN1-208ENST00000530008 TRAPPC8Q9Y2L5 1435 aa2.55□□□□□ -2
CAPRIN1-208ENST00000530008 ARHGEF11O15085 1522 aa2.54□□□□□ -2
CAPRIN1-208ENST00000530008 IGKV2D-26A0A0A0MRZ7 120 aa2.54□□□□□ -2
CAPRIN1-208ENST00000530008 SDC2P34741 201 aa2.54□□□□□ -2
CAPRIN1-208ENST00000530008 RAB5CP51148 216 aa2.54□□□□□ -2
CAPRIN1-208ENST00000530008 C1orf137Q5JT78 98 aa2.54□□□□□ -2
CAPRIN1-208ENST00000530008 Q8N814 137 aa2.54□□□□□ -2
CAPRIN1-208ENST00000530008 OR4C6Q8NH72 309 aa2.54□□□□□ -2
CAPRIN1-208ENST00000530008 NOTCH2Q04721 2471 aa2.54□□□□□ -2
CAPRIN1-208ENST00000530008 BAHCC1Q9P281 2608 aa2.54□□□□□ -2
CAPRIN1-208ENST00000530008 ZFHX2Q9C0A1 2572 aaPredicted RBP2.54□□□□□ -2
CAPRIN1-208ENST00000530008 COL4A5P29400 1685 aa2.53□□□□□ -2
CAPRIN1-208ENST00000530008 FN1P02751 2386 aaKnown RBP2.53□□□□□ -2
CAPRIN1-208ENST00000530008 TCRBV4S1A1TA0A5B7 111 aa2.53□□□□□ -2
CAPRIN1-208ENST00000530008 M0R233 179 aa2.53□□□□□ -2
CAPRIN1-208ENST00000530008 C1orf134Q5TEV5 83 aa2.53□□□□□ -2
CAPRIN1-208ENST00000530008 C4orf22Q6V702 233 aa2.53□□□□□ -2
CAPRIN1-208ENST00000530008 KRTAP4-3Q9BYR4 195 aa2.53□□□□□ -2
CAPRIN1-208ENST00000530008 UBR2Q8IWV8 1755 aa2.53□□□□□ -2
CAPRIN1-208ENST00000530008 ADGBQ8N7X0 1667 aa2.53□□□□□ -2
CAPRIN1-208ENST00000530008 TAF1LQ8IZX4 1826 aa2.52□□□□□ -2.01
CAPRIN1-208ENST00000530008 IGHV1-58A0A0C4DH39 117 aa2.52□□□□□ -2.01
CAPRIN1-208ENST00000530008 ARL5CA6NH57 179 aa2.52□□□□□ -2.01
CAPRIN1-208ENST00000530008 PCNX2A6NKB5 2137 aa2.52□□□□□ -2.01
CAPRIN1-208ENST00000530008 E7EUB6 86 aa2.52□□□□□ -2.01
CAPRIN1-208ENST00000530008 HYPMO75409 117 aa2.52□□□□□ -2.01
CAPRIN1-208ENST00000530008 DSCR4P56555 118 aaPredicted RBP2.52□□□□□ -2.01
CAPRIN1-208ENST00000530008 NDUFA6P56556 154 aa2.52□□□□□ -2.01
CAPRIN1-208ENST00000530008 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
CAPRIN1-208ENST00000530008 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
CAPRIN1-208ENST00000530008 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.52□□□□□ -2.01
CAPRIN1-208ENST00000530008 FAM216BQ8N7L0 139 aa2.52□□□□□ -2.01
CAPRIN1-208ENST00000530008 AIF1LQ9BQI0 150 aa2.52□□□□□ -2.01
CAPRIN1-208ENST00000530008 MED9Q9NWA0 146 aa2.52□□□□□ -2.01
CAPRIN1-208ENST00000530008 CHCHD2Q9Y6H1 151 aaPredicted RBP2.52□□□□□ -2.01
CAPRIN1-208ENST00000530008 RTL9Q8NET4 1388 aa2.51□□□□□ -2.01
CAPRIN1-208ENST00000530008 TRPM1Q7Z4N2 1603 aa2.51□□□□□ -2.01
CAPRIN1-208ENST00000530008 TRBV6-8A0A0A6YYG3 113 aa2.51□□□□□ -2.01
CAPRIN1-208ENST00000530008 MT-ND6P03923 174 aa2.51□□□□□ -2.01
CAPRIN1-208ENST00000530008 SCGB1A1P11684 91 aa2.51□□□□□ -2.01
CAPRIN1-208ENST00000530008 RPS28P62857 69 aaKnown RBP2.51□□□□□ -2.01
CAPRIN1-208ENST00000530008 RAB37Q96AX2 223 aa2.51□□□□□ -2.01
CAPRIN1-208ENST00000530008 HYLS1Q96M11 299 aa2.51□□□□□ -2.01
CAPRIN1-208ENST00000530008 LXNQ9BS40 222 aa2.51□□□□□ -2.01
CAPRIN1-208ENST00000530008 SPANXA1Q9NS26 97 aa2.51□□□□□ -2.01
CAPRIN1-208ENST00000530008 RASL12Q9NYN1 266 aa2.51□□□□□ -2.01
CAPRIN1-208ENST00000530008 OR2T8A6NH00 312 aa2.5□□□□□ -2.01
CAPRIN1-208ENST00000530008 J3KT08 172 aa2.5□□□□□ -2.01
CAPRIN1-208ENST00000530008 CDK6Q00534 326 aa2.5□□□□□ -2.01
CAPRIN1-208ENST00000530008 LINC00305Q7Z4B0 112 aa2.5□□□□□ -2.01
CAPRIN1-208ENST00000530008 C4orf3Q8WVX3 66 aa2.5□□□□□ -2.01
CAPRIN1-208ENST00000530008 MUCL1Q96DR8 90 aa2.5□□□□□ -2.01
CAPRIN1-208ENST00000530008 CYSTM1Q9H1C7 97 aa2.5□□□□□ -2.01
CAPRIN1-208ENST00000530008 TAF9BQ9HBM6 251 aa2.5□□□□□ -2.01
CAPRIN1-208ENST00000530008 DOCK10Q96BY6 2186 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms