RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 TMED3Q9Y3Q3 217 aa2.5□□□□□ -2.01
PTPRC-213ENST00000529828 NBDYA0A0U1RRE5 68 aa2.49□□□□□ -2.01
PTPRC-213ENST00000529828 MEIS3P1A6NDR6 274 aa2.49□□□□□ -2.01
PTPRC-213ENST00000529828 IFITM5A6NNB3 132 aa2.49□□□□□ -2.01
PTPRC-213ENST00000529828 RBFOX2O43251 390 aaKnown RBP eCLIP2.49□□□□□ -2.01
PTPRC-213ENST00000529828 SPART-AS1P0CW21 52 aa2.49□□□□□ -2.01
PTPRC-213ENST00000529828 ZNF25P17030 456 aaPredicted RBP2.49□□□□□ -2.01
PTPRC-213ENST00000529828 RAB6AP20340 208 aa2.49□□□□□ -2.01
PTPRC-213ENST00000529828 GNRHRP30968 328 aa2.49□□□□□ -2.01
PTPRC-213ENST00000529828 LPAR6P43657 344 aa2.49□□□□□ -2.01
PTPRC-213ENST00000529828 P2RY1P47900 373 aa2.49□□□□□ -2.01
PTPRC-213ENST00000529828 HERV-K104P63124 156 aa2.49□□□□□ -2.01
PTPRC-213ENST00000529828 RAB31Q13636 194 aa2.49□□□□□ -2.01
PTPRC-213ENST00000529828 OR8G2PQ6IF36 304 aa2.49□□□□□ -2.01
PTPRC-213ENST00000529828 ZNF367Q7RTV3 350 aa2.49□□□□□ -2.01
PTPRC-213ENST00000529828 HSD17B13Q7Z5P4 300 aaPredicted RBP2.49□□□□□ -2.01
PTPRC-213ENST00000529828 ARRDC1Q8N5I2 433 aa2.49□□□□□ -2.01
PTPRC-213ENST00000529828 BEST4Q8NFU0 473 aa2.49□□□□□ -2.01
PTPRC-213ENST00000529828 TSPAN14Q8NG11 270 aa2.49□□□□□ -2.01
PTPRC-213ENST00000529828 OR1P1Q8NH06 330 aa2.49□□□□□ -2.01
PTPRC-213ENST00000529828 FCAMRQ8WWV6 532 aa2.49□□□□□ -2.01
PTPRC-213ENST00000529828 RAB40CQ96S21 281 aa2.49□□□□□ -2.01
PTPRC-213ENST00000529828 TMEM208Q9BTX3 173 aa2.49□□□□□ -2.01
PTPRC-213ENST00000529828 MAGT1Q9H0U3 335 aa2.49□□□□□ -2.01
PTPRC-213ENST00000529828 TMPRSS5Q9H3S3 457 aa2.49□□□□□ -2.01
PTPRC-213ENST00000529828 DUSP21Q9H596 190 aa2.49□□□□□ -2.01
PTPRC-213ENST00000529828 PLEKHA2Q9HB19 425 aa2.49□□□□□ -2.01
PTPRC-213ENST00000529828 MCUBQ9NWR8 336 aa2.49□□□□□ -2.01
PTPRC-213ENST00000529828 COMMD9Q9P000 198 aa2.49□□□□□ -2.01
PTPRC-213ENST00000529828 MRPL36Q9P0J6 103 aaKnown RBP2.49□□□□□ -2.01
PTPRC-213ENST00000529828 SSR3Q9UNL2 185 aa2.49□□□□□ -2.01
PTPRC-213ENST00000529828 TRAV2A0A0B4J234 112 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 TRBV7-9A0A0J9YWB2 115 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 RPS10-NUDT3A0A1W2PQS6 291 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 PDCD5O14737 125 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 SCO1O75880 301 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 NUDT3O95989 172 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 TCRBP04435 133 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 ANXA7P20073 488 aaKnown RBP2.48□□□□□ -2.01
PTPRC-213ENST00000529828 RAB3BP20337 219 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 MYL9P24844 172 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 DDTP30046 118 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 S100A11P31949 105 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 RAB2AP61019 212 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 PKIAP61925 76 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 RPL19P84098 196 aaKnown RBP2.48□□□□□ -2.01
PTPRC-213ENST00000529828 IZUMO4Q1ZYL8 232 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 GDF5OSQ5U4N7 250 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 COQ8AQ8NI60 647 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 DCANP1Q8TF63 244 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 GRAMD2BQ96HH9 432 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 NARS2Q96I59 477 aaKnown RBP2.48□□□□□ -2.01
PTPRC-213ENST00000529828 TMEM56Q96MV1 263 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 NIPSNAP3BQ9BS92 247 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 TMEM231Q9H6L2 316 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 DKK2Q9UBU2 259 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 TMEM56-RWDD3S4R434 201 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 RNF213Q63HN8 5207 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 SMCO3A2RU48 225 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 H3BMM0 161 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 ADAP1O75689 374 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 PRM2P04554 102 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 CD5P06127 495 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 RD3LP0DJH9 198 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 ANXA3P12429 323 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 NPPCP23582 126 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 NPBWR1P48145 328 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 HERV-K104P61576 105 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 HAMPP81172 84 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 MLLT11Q13015 90 aaPredicted RBP2.48□□□□□ -2.01
PTPRC-213ENST00000529828 SSX1Q16384 188 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 ATP6V1FQ16864 119 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 TIGITQ495A1 244 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 Q5VSD8 79 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 C22orf42Q6IC83 251 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 S100A7AQ86SG5 101 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 BOD1L2Q8IYS8 172 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 OR6F1Q8NGZ6 308 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 ZNRF2Q8NHG8 242 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 LGALS14Q8TCE9 139 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 ZFAND1Q8TCF1 268 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 METTL26Q96S19 204 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 KRTAP1-5Q9BYS1 174 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 MED9Q9NWA0 146 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 SCP2D1Q9UJQ7 156 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 PRNDQ9UKY0 176 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 YTHDF2Q9Y5A9 579 aaKnown RBP2.48□□□□□ -2.01
PTPRC-213ENST00000529828 RFNGQ9Y644 331 aa2.48□□□□□ -2.01
PTPRC-213ENST00000529828 TRAV18A0A075B6X5 111 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 LOC102723971A0A1B0GUV8 181 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 A0A1W2PS18 150 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 ZNF705FA8MVS1 300 aaPredicted RBP2.47□□□□□ -2.01
PTPRC-213ENST00000529828 DISC1C4P0D8 188 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 FAM90A26D6RGX4 464 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 TEX46H3BTG2 121 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 PGLYRP1O75594 196 aaPredicted RBP2.47□□□□□ -2.01
PTPRC-213ENST00000529828 SCGNO76038 276 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 TMEM50AO95807 157 aa2.47□□□□□ -2.01
PTPRC-213ENST00000529828 ZNF705DP0CH99 300 aaPredicted RBP2.47□□□□□ -2.01
PTPRC-213ENST00000529828 ZNF705BP0CI00 300 aaPredicted RBP2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms