RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 OR51A4Q8NGJ6 313 aa2.09□□□□□ -2.07
C11orf88-204ENST00000529661 PRADC1Q9BSG0 188 aa2.09□□□□□ -2.07
C11orf88-204ENST00000529661 NHP2Q9NX24 153 aaKnown RBP2.09□□□□□ -2.07
C11orf88-204ENST00000529661 U3KQ87 197 aa2.09□□□□□ -2.07
C11orf88-204ENST00000529661 FOCADQ5VW36 1801 aa2.09□□□□□ -2.08
C11orf88-204ENST00000529661 CCDC171Q6TFL3 1326 aa2.09□□□□□ -2.08
C11orf88-204ENST00000529661 MYH1P12882 1939 aa2.09□□□□□ -2.08
C11orf88-204ENST00000529661 NALCNQ8IZF0 1738 aa2.08□□□□□ -2.08
C11orf88-204ENST00000529661 SDK2Q58EX2 2172 aa2.08□□□□□ -2.08
C11orf88-204ENST00000529661 SDCBPO00560 298 aaPredicted RBP2.08□□□□□ -2.08
C11orf88-204ENST00000529661 IFNA4P05014 189 aa2.08□□□□□ -2.08
C11orf88-204ENST00000529661 FABP2P12104 132 aa2.08□□□□□ -2.08
C11orf88-204ENST00000529661 NDUFA5Q16718 116 aa2.08□□□□□ -2.08
C11orf88-204ENST00000529661 MAGOHBQ96A72 148 aaKnown RBP2.08□□□□□ -2.08
C11orf88-204ENST00000529661 C20orf166-AS1Q96NR2 134 aa2.08□□□□□ -2.08
C11orf88-204ENST00000529661 CBLN4Q9NTU7 201 aa2.08□□□□□ -2.08
C11orf88-204ENST00000529661 CALML5Q9NZT1 146 aa2.08□□□□□ -2.08
C11orf88-204ENST00000529661 MYH13Q9UKX3 1938 aa2.08□□□□□ -2.08
C11orf88-204ENST00000529661 RTL9Q8NET4 1388 aa2.08□□□□□ -2.08
C11orf88-204ENST00000529661 SCAF11Q99590 1463 aaKnown RBP2.07□□□□□ -2.08
C11orf88-204ENST00000529661 NCKAP5O14513 1909 aa2.07□□□□□ -2.08
C11orf88-204ENST00000529661 IGLV3-9A0A075B6K5 115 aa2.07□□□□□ -2.08
C11orf88-204ENST00000529661 SDHAF1A6NFY7 115 aa2.07□□□□□ -2.08
C11orf88-204ENST00000529661 OR51F1A6NGY5 319 aa2.07□□□□□ -2.08
C11orf88-204ENST00000529661 A8MWV9 139 aa2.07□□□□□ -2.08
C11orf88-204ENST00000529661 ODF3BA8MYP8 253 aa2.07□□□□□ -2.08
C11orf88-204ENST00000529661 MIF4GDA9UHW6 222 aaKnown RBP2.07□□□□□ -2.08
C11orf88-204ENST00000529661 APOC1P02654 83 aa2.07□□□□□ -2.08
C11orf88-204ENST00000529661 METTL15P1P0C7V9 234 aa2.07□□□□□ -2.08
C11orf88-204ENST00000529661 RPL22P35268 128 aaKnown RBP2.07□□□□□ -2.08
C11orf88-204ENST00000529661 DYNLT1P63172 113 aa2.07□□□□□ -2.08
C11orf88-204ENST00000529661 ZNF90Q03938 601 aa2.07□□□□□ -2.08
C11orf88-204ENST00000529661 TMEM14EPQ6UXP3 125 aa2.07□□□□□ -2.08
C11orf88-204ENST00000529661 PATE2Q6UY27 113 aa2.07□□□□□ -2.08
C11orf88-204ENST00000529661 SOSTDC1Q6X4U4 206 aa2.07□□□□□ -2.08
C11orf88-204ENST00000529661 SLC30A7Q8NEW0 376 aa2.07□□□□□ -2.08
C11orf88-204ENST00000529661 OR4S1Q8NGB4 309 aa2.07□□□□□ -2.08
C11orf88-204ENST00000529661 OR5D16Q8NGK9 328 aa2.07□□□□□ -2.08
C11orf88-204ENST00000529661 OR4C6Q8NH72 309 aa2.07□□□□□ -2.08
C11orf88-204ENST00000529661 NAT14Q8WUY8 206 aa2.07□□□□□ -2.08
C11orf88-204ENST00000529661 ZC2HC1AQ96GY0 325 aa2.07□□□□□ -2.08
C11orf88-204ENST00000529661 MCEEQ96PE7 176 aa2.07□□□□□ -2.08
C11orf88-204ENST00000529661 LINC00467Q9BRT7 94 aa2.07□□□□□ -2.08
C11orf88-204ENST00000529661 C2orf88Q9BSF0 95 aa2.07□□□□□ -2.08
C11orf88-204ENST00000529661 OR5AC2Q9NZP5 309 aa2.07□□□□□ -2.08
C11orf88-204ENST00000529661 PLXNA3P51805 1871 aa2.07□□□□□ -2.08
C11orf88-204ENST00000529661 TCOF1Q13428 1488 aaKnown RBP2.07□□□□□ -2.08
C11orf88-204ENST00000529661 KDM5BQ9UGL1 1544 aa2.07□□□□□ -2.08
C11orf88-204ENST00000529661 PHLPP1O60346 1717 aa2.06□□□□□ -2.08
C11orf88-204ENST00000529661 LTBP2Q14767 1821 aa2.06□□□□□ -2.08
C11orf88-204ENST00000529661 TRAV13-1A0A0B4J241 112 aa2.06□□□□□ -2.08
C11orf88-204ENST00000529661 TRBV27A0A0K0K1C4 114 aa2.06□□□□□ -2.08
C11orf88-204ENST00000529661 A0A1B0GV90 55 aa2.06□□□□□ -2.08
C11orf88-204ENST00000529661 LINC00587B1AMM8 73 aa2.06□□□□□ -2.08
C11orf88-204ENST00000529661 H3BMG7 143 aa2.06□□□□□ -2.08
C11orf88-204ENST00000529661 M0R2Z0 102 aa2.06□□□□□ -2.08
C11orf88-204ENST00000529661 DLEU1O43261 78 aa2.06□□□□□ -2.08
C11orf88-204ENST00000529661 PAEPP09466 180 aa2.06□□□□□ -2.08
C11orf88-204ENST00000529661 TSPAN19P0C672 248 aa2.06□□□□□ -2.08
C11orf88-204ENST00000529661 GLYATL3Q5SZD4 288 aa2.06□□□□□ -2.08
C11orf88-204ENST00000529661 C4orf22Q6V702 233 aa2.06□□□□□ -2.08
C11orf88-204ENST00000529661 TSTD1Q8NFU3 115 aa2.06□□□□□ -2.08
C11orf88-204ENST00000529661 OR4E2Q8NGC2 313 aa2.06□□□□□ -2.08
C11orf88-204ENST00000529661 OR5A2Q8NGI9 324 aa2.06□□□□□ -2.08
C11orf88-204ENST00000529661 ZCCHC13Q8WW36 166 aaKnown RBP2.06□□□□□ -2.08
C11orf88-204ENST00000529661 AQP3Q92482 292 aa2.06□□□□□ -2.08
C11orf88-204ENST00000529661 MRPS24Q96EL2 167 aaKnown RBP2.06□□□□□ -2.08
C11orf88-204ENST00000529661 ZNF714Q96N38 554 aa2.06□□□□□ -2.08
C11orf88-204ENST00000529661 Q9BRP9 147 aa2.06□□□□□ -2.08
C11orf88-204ENST00000529661 SMIM3Q9BZL3 60 aa2.06□□□□□ -2.08
C11orf88-204ENST00000529661 ERG28Q9UKR5 140 aa2.06□□□□□ -2.08
C11orf88-204ENST00000529661 BAIAP2Q9UQB8 552 aa2.06□□□□□ -2.08
C11orf88-204ENST00000529661 FRMPD1Q5SYB0 1578 aa2.06□□□□□ -2.08
C11orf88-204ENST00000529661 SMARCA4P51532 1647 aa2.06□□□□□ -2.08
C11orf88-204ENST00000529661 NUMA1Q14980 2115 aa2.05□□□□□ -2.08
C11orf88-204ENST00000529661 MEIKINA0A087WXM9 373 aa2.05□□□□□ -2.08
C11orf88-204ENST00000529661 MUC21A0A0G2JKD1 596 aa2.05□□□□□ -2.08
C11orf88-204ENST00000529661 MUC21A0A140T8X8 626 aa2.05□□□□□ -2.08
C11orf88-204ENST00000529661 CCDC160A6NGH7 325 aa2.05□□□□□ -2.08
C11orf88-204ENST00000529661 K7ERJ3 54 aa2.05□□□□□ -2.08
C11orf88-204ENST00000529661 CRYGAP11844 174 aa2.05□□□□□ -2.08
C11orf88-204ENST00000529661 DEFA4P12838 97 aa2.05□□□□□ -2.08
C11orf88-204ENST00000529661 KDELR1P24390 212 aa2.05□□□□□ -2.08
C11orf88-204ENST00000529661 NCS1P62166 190 aa2.05□□□□□ -2.08
C11orf88-204ENST00000529661 KRTAP6-3Q3LI67 103 aa2.05□□□□□ -2.08
C11orf88-204ENST00000529661 TMEM244Q5VVB8 128 aa2.05□□□□□ -2.08
C11orf88-204ENST00000529661 LCN15Q6UWW0 184 aa2.05□□□□□ -2.08
C11orf88-204ENST00000529661 Q6ZQT0 140 aa2.05□□□□□ -2.08
C11orf88-204ENST00000529661 C7orf65Q6ZTY9 151 aa2.05□□□□□ -2.08
C11orf88-204ENST00000529661 OR4K15Q8NH41 348 aa2.05□□□□□ -2.08
C11orf88-204ENST00000529661 DISP2A7MBM2 1401 aa2.05□□□□□ -2.08
C11orf88-204ENST00000529661 PRG4Q92954 1404 aaPredicted RBP2.05□□□□□ -2.08
C11orf88-204ENST00000529661 SLIT2O94813 1529 aa2.05□□□□□ -2.08
C11orf88-204ENST00000529661 RER1O15258 196 aa2.04□□□□□ -2.08
C11orf88-204ENST00000529661 KDM6AO15550 1401 aaPredicted RBP2.04□□□□□ -2.08
C11orf88-204ENST00000529661 EIF4G3O43432 1585 aaKnown RBP2.04□□□□□ -2.08
C11orf88-204ENST00000529661 TIMM17BO60830 172 aa2.04□□□□□ -2.08
C11orf88-204ENST00000529661 NCR2O95944 276 aa2.04□□□□□ -2.08
C11orf88-204ENST00000529661 MT-ND4LP03901 98 aa2.04□□□□□ -2.08
C11orf88-204ENST00000529661 SHBGP04278 402 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms