RNA–Protein interactions for RNA: ENST00000525821.1

CTNND1-211, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-211ENST00000525821 TAS2R8Q9NYW2 309 aa4.14□□□□□ -1.75
CTNND1-211ENST00000525821 YTHDF2Q9Y5A9 579 aaKnown RBP4.14□□□□□ -1.75
CTNND1-211ENST00000525821 RFNGQ9Y644 331 aa4.14□□□□□ -1.75
CTNND1-211ENST00000525821 A0A075B6Q4 140 aa4.13□□□□□ -1.75
CTNND1-211ENST00000525821 A0A087WXM4 84 aa4.13□□□□□ -1.75
CTNND1-211ENST00000525821 TRAV2A0A0B4J234 112 aa4.13□□□□□ -1.75
CTNND1-211ENST00000525821 TRAV1-2A0A0B4J238 106 aa4.13□□□□□ -1.75
CTNND1-211ENST00000525821 TEX50A0A1B0GTY4 177 aa4.13□□□□□ -1.75
CTNND1-211ENST00000525821 F5H768 121 aa4.13□□□□□ -1.75
CTNND1-211ENST00000525821 UPK2O00526 184 aa4.13□□□□□ -1.75
CTNND1-211ENST00000525821 SLC17A2O00624 439 aa4.13□□□□□ -1.75
CTNND1-211ENST00000525821 TNFAIP8O95379 198 aa4.13□□□□□ -1.75
CTNND1-211ENST00000525821 HRASP01112 189 aa4.13□□□□□ -1.75
CTNND1-211ENST00000525821 IFNA5P01569 189 aa4.13□□□□□ -1.75
CTNND1-211ENST00000525821 PRM2P04554 102 aa4.13□□□□□ -1.75
CTNND1-211ENST00000525821 TRAPPC2P0DI81 140 aa4.13□□□□□ -1.75
CTNND1-211ENST00000525821 TRAPPC2BP0DI82 140 aa4.13□□□□□ -1.75
CTNND1-211ENST00000525821 RAB3BP20337 219 aa4.13□□□□□ -1.75
CTNND1-211ENST00000525821 CLDN12P56749 244 aa4.13□□□□□ -1.75
CTNND1-211ENST00000525821 LINC00315P59091 139 aa4.13□□□□□ -1.75
CTNND1-211ENST00000525821 MRPS15P82914 257 aaKnown RBP4.13□□□□□ -1.75
CTNND1-211ENST00000525821 NEDD8Q15843 81 aa4.13□□□□□ -1.75
CTNND1-211ENST00000525821 USF2Q15853 346 aaPredicted RBP4.13□□□□□ -1.75
CTNND1-211ENST00000525821 KCTD21Q4G0X4 260 aa4.13□□□□□ -1.75
CTNND1-211ENST00000525821 Q6ZRN7 208 aaPredicted RBP4.13□□□□□ -1.75
CTNND1-211ENST00000525821 SLC25A46Q96AG3 418 aa4.13□□□□□ -1.75
CTNND1-211ENST00000525821 FAM3DQ96BQ1 224 aa4.13□□□□□ -1.75
CTNND1-211ENST00000525821 NXF2Q9GZY0 626 aaKnown RBP4.13□□□□□ -1.75
CTNND1-211ENST00000525821 Q9H3A6 140 aa4.13□□□□□ -1.75
CTNND1-211ENST00000525821 VCX3AQ9NNX9 186 aa4.13□□□□□ -1.75
CTNND1-211ENST00000525821 NDUFB11Q9NX14 153 aa4.13□□□□□ -1.75
CTNND1-211ENST00000525821 BET1LQ9NYM9 111 aa4.13□□□□□ -1.75
CTNND1-211ENST00000525821 RAB22AQ9UL26 194 aa4.13□□□□□ -1.75
CTNND1-211ENST00000525821 F11RQ9Y624 299 aaKnown RBP4.13□□□□□ -1.75
CTNND1-211ENST00000525821 LOC100506127A0A0U1RQW1 187 aa4.12□□□□□ -1.75
CTNND1-211ENST00000525821 METTL21EPA6NDL7 271 aa4.12□□□□□ -1.75
CTNND1-211ENST00000525821 H3BMM0 161 aa4.12□□□□□ -1.75
CTNND1-211ENST00000525821 CYB5BO43169 146 aa4.12□□□□□ -1.75
CTNND1-211ENST00000525821 CD5P06127 495 aa4.12□□□□□ -1.75
CTNND1-211ENST00000525821 DEFB130BP0DP73 79 aa4.12□□□□□ -1.75
CTNND1-211ENST00000525821 DEFB130AP0DP74 79 aa4.12□□□□□ -1.75
CTNND1-211ENST00000525821 CD36P16671 472 aa4.12□□□□□ -1.75
CTNND1-211ENST00000525821 FGF9P31371 208 aaPredicted RBP4.12□□□□□ -1.75
CTNND1-211ENST00000525821 NPBWR1P48145 328 aa4.12□□□□□ -1.75
CTNND1-211ENST00000525821 DHRS2Q13268 280 aa4.12□□□□□ -1.75
CTNND1-211ENST00000525821 EIF4EBP1Q13541 118 aaPredicted RBP4.12□□□□□ -1.75
CTNND1-211ENST00000525821 CLINT1Q14677 625 aa4.12□□□□□ -1.75
CTNND1-211ENST00000525821 OXA1LQ15070 435 aa4.12□□□□□ -1.75
CTNND1-211ENST00000525821 TTC32Q5I0X7 151 aa4.12□□□□□ -1.75
CTNND1-211ENST00000525821 TPRA1Q86W33 373 aa4.12□□□□□ -1.75
CTNND1-211ENST00000525821 OR56B1Q8NGI3 324 aa4.12□□□□□ -1.75
CTNND1-211ENST00000525821 OR6F1Q8NGZ6 308 aa4.12□□□□□ -1.75
CTNND1-211ENST00000525821 DCANP1Q8TF63 244 aa4.12□□□□□ -1.75
CTNND1-211ENST00000525821 GINS3Q9BRX5 216 aa4.12□□□□□ -1.75
CTNND1-211ENST00000525821 TXNL4BQ9NX01 149 aaKnown RBP4.12□□□□□ -1.75
CTNND1-211ENST00000525821 PUS1Q9Y606 427 aaKnown RBP eCLIP4.12□□□□□ -1.75
CTNND1-211ENST00000525821 PKHD1L1Q86WI1 4243 aa4.11□□□□□ -1.75
CTNND1-211ENST00000525821 TEX48A0A1B0GUV7 120 aa4.11□□□□□ -1.75
CTNND1-211ENST00000525821 SMIM30A4D0T7 59 aa4.11□□□□□ -1.75
CTNND1-211ENST00000525821 HELTA6NFD8 242 aa4.11□□□□□ -1.75
CTNND1-211ENST00000525821 SMIM9A6NGZ8 99 aa4.11□□□□□ -1.75
CTNND1-211ENST00000525821 IFITM5A6NNB3 132 aa4.11□□□□□ -1.75
CTNND1-211ENST00000525821 I3L2K1 104 aa4.11□□□□□ -1.75
CTNND1-211ENST00000525821 SULT1C2O00338 296 aa4.11□□□□□ -1.75
CTNND1-211ENST00000525821 GNG7O60262 68 aa4.11□□□□□ -1.75
CTNND1-211ENST00000525821 MT-CO2P00403 227 aa4.11□□□□□ -1.75
CTNND1-211ENST00000525821 HLA-DQB1P01920 261 aa4.11□□□□□ -1.75
CTNND1-211ENST00000525821 GADD45AP24522 165 aa4.11□□□□□ -1.75
CTNND1-211ENST00000525821 SDC2P34741 201 aa4.11□□□□□ -1.75
CTNND1-211ENST00000525821 TALDO1P37837 337 aa4.11□□□□□ -1.75
CTNND1-211ENST00000525821 P2RY1P47900 373 aa4.11□□□□□ -1.75
CTNND1-211ENST00000525821 OR10A3P58181 314 aa4.11□□□□□ -1.75
CTNND1-211ENST00000525821 NUTF2P61970 127 aaKnown RBP4.11□□□□□ -1.75
CTNND1-211ENST00000525821 MXD1Q05195 221 aa4.11□□□□□ -1.75
CTNND1-211ENST00000525821 Q1RN00 199 aa4.11□□□□□ -1.75
CTNND1-211ENST00000525821 TMEM69Q5SWH9 247 aa4.11□□□□□ -1.75
CTNND1-211ENST00000525821 GDF5OSQ5U4N7 250 aa4.11□□□□□ -1.75
CTNND1-211ENST00000525821 PCNPQ8WW12 178 aaKnown RBP4.11□□□□□ -1.75
CTNND1-211ENST00000525821 HSD17B10Q99714 261 aaKnown RBP4.11□□□□□ -1.75
CTNND1-211ENST00000525821 ATG5Q9H1Y0 275 aa4.11□□□□□ -1.75
CTNND1-211ENST00000525821 DNAH8Q96JB1 4490 aa4.11□□□□□ -1.75
CTNND1-211ENST00000525821 HBE1P02100 147 aa4.1□□□□□ -1.75
CTNND1-211ENST00000525821 NPPCP23582 126 aa4.1□□□□□ -1.75
CTNND1-211ENST00000525821 LSM3P62310 102 aaKnown RBP4.1□□□□□ -1.75
CTNND1-211ENST00000525821 CDNFQ49AH0 187 aa4.1□□□□□ -1.75
CTNND1-211ENST00000525821 IDNKQ5T6J7 187 aa4.1□□□□□ -1.75
CTNND1-211ENST00000525821 KRTAP5-4Q6L8H1 288 aa4.1□□□□□ -1.75
CTNND1-211ENST00000525821 C1orf158Q8N1D5 194 aa4.1□□□□□ -1.75
CTNND1-211ENST00000525821 OR1L8Q8NGR8 309 aa4.1□□□□□ -1.75
CTNND1-211ENST00000525821 OR10R2Q8NGX6 335 aa4.1□□□□□ -1.75
CTNND1-211ENST00000525821 DEFB104AQ8WTQ1 72 aa4.1□□□□□ -1.75
CTNND1-211ENST00000525821 LSM10Q969L4 123 aaKnown RBP4.1□□□□□ -1.75
CTNND1-211ENST00000525821 PINX1Q96BK5 328 aaKnown RBP4.1□□□□□ -1.75
CTNND1-211ENST00000525821 RAB3CQ96E17 227 aa4.1□□□□□ -1.75
CTNND1-211ENST00000525821 YIPF6Q96EC8 236 aa4.1□□□□□ -1.75
CTNND1-211ENST00000525821 C7orf50Q9BRJ6 194 aaKnown RBP4.1□□□□□ -1.75
CTNND1-211ENST00000525821 KRTAP4-4Q9BYR3 166 aa4.1□□□□□ -1.75
CTNND1-211ENST00000525821 SLC5A7Q9GZV3 580 aa4.1□□□□□ -1.75
CTNND1-211ENST00000525821 SLC35B3Q9H1N7 401 aa4.1□□□□□ -1.75
CTNND1-211ENST00000525821 DCSTAMPQ9H295 470 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms