RNA–Protein interactions for RNA: ENST00000524127.5

CTNNA1-241, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 483 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-241ENST00000524127 LTC4SQ16873 150 aa3.98□□□□□ -1.77
CTNNA1-241ENST00000524127 C3orf36Q3SXR2 165 aa3.98□□□□□ -1.77
CTNNA1-241ENST00000524127 LINC01559Q495D7 138 aa3.98□□□□□ -1.77
CTNNA1-241ENST00000524127 PATE2Q6UY27 113 aa3.98□□□□□ -1.77
CTNNA1-241ENST00000524127 ZNF841Q6ZN19 808 aa3.98□□□□□ -1.77
CTNNA1-241ENST00000524127 C1orf229Q6ZS94 237 aaPredicted RBP3.98□□□□□ -1.77
CTNNA1-241ENST00000524127 ZNF833PQ6ZTB9 187 aa3.98□□□□□ -1.77
CTNNA1-241ENST00000524127 LINC00173Q6ZV60 143 aa3.98□□□□□ -1.77
CTNNA1-241ENST00000524127 RPRMLQ8N4K4 120 aa3.98□□□□□ -1.77
CTNNA1-241ENST00000524127 TPRX1Q8N7U7 411 aa3.98□□□□□ -1.77
CTNNA1-241ENST00000524127 C8orf31Q8N9H6 132 aa3.98□□□□□ -1.77
CTNNA1-241ENST00000524127 OR2K2Q8NGT1 345 aa3.98□□□□□ -1.77
CTNNA1-241ENST00000524127 OR10X1Q8NGY0 326 aa3.98□□□□□ -1.77
CTNNA1-241ENST00000524127 VSTM2AQ8TAG5 236 aa3.98□□□□□ -1.77
CTNNA1-241ENST00000524127 TMEM167AQ8TBQ9 72 aa3.98□□□□□ -1.77
CTNNA1-241ENST00000524127 GTSF1Q8WW33 167 aa3.98□□□□□ -1.77
CTNNA1-241ENST00000524127 ITLN1Q8WWA0 313 aa3.98□□□□□ -1.77
CTNNA1-241ENST00000524127 DAZAP1Q96EP5 407 aaKnown RBP3.98□□□□□ -1.77
CTNNA1-241ENST00000524127 LINC00479Q96M42 142 aa3.98□□□□□ -1.77
CTNNA1-241ENST00000524127 FER1L6-AS2Q96M78 137 aa3.98□□□□□ -1.77
CTNNA1-241ENST00000524127 AP1S3Q96PC3 154 aa3.98□□□□□ -1.77
CTNNA1-241ENST00000524127 TRGV9Q99603 122 aa3.98□□□□□ -1.77
CTNNA1-241ENST00000524127 SPOCK3Q9BQ16 436 aa3.98□□□□□ -1.77
CTNNA1-241ENST00000524127 SSBP4Q9BWG4 385 aaPredicted RBP3.98□□□□□ -1.77
CTNNA1-241ENST00000524127 HINT2Q9BX68 163 aa3.98□□□□□ -1.77
CTNNA1-241ENST00000524127 PLSCR4Q9NRQ2 329 aa3.98□□□□□ -1.77
CTNNA1-241ENST00000524127 TMEM14CQ9P0S9 112 aa3.98□□□□□ -1.77
CTNNA1-241ENST00000524127 RPUSD1Q9UJJ7 312 aaKnown RBP3.98□□□□□ -1.77
CTNNA1-241ENST00000524127 RNF24Q9Y225 148 aa3.98□□□□□ -1.77
CTNNA1-241ENST00000524127 U3KQK5 164 aa3.98□□□□□ -1.77
CTNNA1-241ENST00000524127 ROS1P08922 2347 aa3.98□□□□□ -1.77
CTNNA1-241ENST00000524127 HCFC1P51610 2035 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 TET2Q6N021 2002 aaPredicted RBP3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 TACC2O95359 2948 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 IGKV1D-37A0A075B6S9 117 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 A0A087X0K7 114 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 TRGV5A0A0B4J1U4 118 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 A0A1B0GUT8 65 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 A1L4Q6 167 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 PGPA6NDG6 321 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 SH2D7A6NKC9 451 aaPredicted RBP3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 J3QKU1 62 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 OVOL3O00110 214 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 SMAD7O15105 426 aaKnown RBP3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 TCRAP04437 139 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 SAA1P0DJI8 122 aaPredicted RBP3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 PYYP10082 97 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 HLA-DRB4P13762 266 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 CD46P15529 392 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 TMEM11P17152 192 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 GNLYP22749 145 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 HOXC12P31275 282 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 MORN5Q5VZ52 161 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 ZNF493Q6ZR52 646 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 FA2HQ7L5A8 372 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 MOB3BQ86TA1 216 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 Q86TA4 180 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 CXorf67Q86X51 503 aaPredicted RBP3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 LINC00311Q8N616 119 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 SVIPQ8NHG7 77 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 TNFRSF14Q92956 283 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 PGLYRP4Q96LB8 373 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 TMUB1Q9BVT8 246 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 AP5S1Q9NUS5 200 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 SIGLEC8Q9NYZ4 499 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 JKAMPQ9P055 326 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 HIGD1BQ9P298 99 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 HLA-DRB4X5D2U9 266 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 LRBAP50851 2863 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 APCP25054 2843 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 TEX15Q9BXT5 2789 aa3.97□□□□□ -1.77
CTNNA1-241ENST00000524127 HRNRQ86YZ3 2850 aaPredicted RBP3.96□□□□□ -1.78
CTNNA1-241ENST00000524127 A0A0G2JLM5 398 aa3.96□□□□□ -1.78
CTNNA1-241ENST00000524127 IGHV3-64DA0A0J9YX35 117 aa3.96□□□□□ -1.78
CTNNA1-241ENST00000524127 A0A1W2PPM0 123 aa3.96□□□□□ -1.78
CTNNA1-241ENST00000524127 LINC01546A6NGU7 62 aa3.96□□□□□ -1.78
CTNNA1-241ENST00000524127 VSTM5A8MXK1 200 aa3.96□□□□□ -1.78
CTNNA1-241ENST00000524127 IGHV3-13P01766 116 aa3.96□□□□□ -1.78
CTNNA1-241ENST00000524127 IGHG3P01860 377 aa3.96□□□□□ -1.78
CTNNA1-241ENST00000524127 TFF1P04155 84 aa3.96□□□□□ -1.78
CTNNA1-241ENST00000524127 CECR9P0C854 216 aa3.96□□□□□ -1.78
CTNNA1-241ENST00000524127 FABP2P12104 132 aa3.96□□□□□ -1.78
CTNNA1-241ENST00000524127 GP9P14770 177 aa3.96□□□□□ -1.78
CTNNA1-241ENST00000524127 MYOD1P15172 320 aa3.96□□□□□ -1.78
CTNNA1-241ENST00000524127 GNG5P63218 68 aa3.96□□□□□ -1.78
CTNNA1-241ENST00000524127 MEF2CQ06413 473 aaPredicted RBP3.96□□□□□ -1.78
CTNNA1-241ENST00000524127 KIR3DS1Q14943 382 aa3.96□□□□□ -1.78
CTNNA1-241ENST00000524127 C3AR1Q16581 482 aa3.96□□□□□ -1.78
CTNNA1-241ENST00000524127 HIST2H2BCQ6DN03 193 aa3.96□□□□□ -1.78
CTNNA1-241ENST00000524127 ADAMTSL5Q6ZMM2 481 aa3.96□□□□□ -1.78
CTNNA1-241ENST00000524127 LINC00322Q6ZN03 302 aaPredicted RBP3.96□□□□□ -1.78
CTNNA1-241ENST00000524127 LINC00305Q7Z4B0 112 aa3.96□□□□□ -1.78
CTNNA1-241ENST00000524127 LHFPL4Q7Z7J7 247 aa3.96□□□□□ -1.78
CTNNA1-241ENST00000524127 LYPD1Q8N2G4 141 aa3.96□□□□□ -1.78
CTNNA1-241ENST00000524127 ZADH2Q8N4Q0 377 aa3.96□□□□□ -1.78
CTNNA1-241ENST00000524127 TMEM178AQ8NBL3 297 aa3.96□□□□□ -1.78
CTNNA1-241ENST00000524127 TMEM186Q96B77 213 aa3.96□□□□□ -1.78
CTNNA1-241ENST00000524127 SARAFQ96BY9 339 aa3.96□□□□□ -1.78
CTNNA1-241ENST00000524127 PLPPR2Q96GM1 343 aa3.96□□□□□ -1.78
CTNNA1-241ENST00000524127 SPRR3Q9UBC9 169 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms