RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 ZNF600Q6ZNG1 722 aa5.34□□□□□ -1.55
CSMD1-211ENST00000523062 C9orf139Q6ZV77 190 aa5.34□□□□□ -1.55
CSMD1-211ENST00000523062 ZNF329Q86UD4 541 aa5.34□□□□□ -1.55
CSMD1-211ENST00000523062 FAM223AQ8IWN6 122 aa5.34□□□□□ -1.55
CSMD1-211ENST00000523062 ZNF491Q8N8L2 437 aa5.34□□□□□ -1.55
CSMD1-211ENST00000523062 MAPK1IP1LQ8NDC0 245 aa5.34□□□□□ -1.55
CSMD1-211ENST00000523062 OR4F17Q8NGA8 305 aa5.34□□□□□ -1.55
CSMD1-211ENST00000523062 OR5R1Q8NH85 324 aa5.34□□□□□ -1.55
CSMD1-211ENST00000523062 EEF1AKMT3Q96AZ1 226 aa5.34□□□□□ -1.55
CSMD1-211ENST00000523062 ELOVL1Q9BW60 279 aa5.34□□□□□ -1.55
CSMD1-211ENST00000523062 SOX21Q9Y651 276 aaPredicted RBP5.34□□□□□ -1.55
CSMD1-211ENST00000523062 TRBV20OR9-2A0A075B6H5 130 aa5.33□□□□□ -1.56
CSMD1-211ENST00000523062 TRBV7-1A0A0A6YYK4 115 aa5.33□□□□□ -1.56
CSMD1-211ENST00000523062 LOC105371267A0A1B0GV96 52 aa5.33□□□□□ -1.56
CSMD1-211ENST00000523062 HELTA6NFD8 242 aa5.33□□□□□ -1.56
CSMD1-211ENST00000523062 OR2T8A6NH00 312 aa5.33□□□□□ -1.56
CSMD1-211ENST00000523062 LINC01548A6NM66 108 aa5.33□□□□□ -1.56
CSMD1-211ENST00000523062 AP4M1O00189 453 aa5.33□□□□□ -1.56
CSMD1-211ENST00000523062 BMPR1BO00238 502 aa5.33□□□□□ -1.56
CSMD1-211ENST00000523062 PEX7O00628 323 aa5.33□□□□□ -1.56
CSMD1-211ENST00000523062 TGOLN2O43493 480 aa5.33□□□□□ -1.56
CSMD1-211ENST00000523062 BRI3O95415 125 aa5.33□□□□□ -1.56
CSMD1-211ENST00000523062 IGHV3-23P01764 117 aa5.33□□□□□ -1.56
CSMD1-211ENST00000523062 PLA2G1BP04054 148 aaKnown RBP5.33□□□□□ -1.56
CSMD1-211ENST00000523062 SLC25A5P05141 298 aaKnown RBP5.33□□□□□ -1.56
CSMD1-211ENST00000523062 GPR183P32249 361 aa5.33□□□□□ -1.56
CSMD1-211ENST00000523062 SRP14P37108 136 aaKnown RBP5.33□□□□□ -1.56
CSMD1-211ENST00000523062 MYCNOSP40205 109 aa5.33□□□□□ -1.56
CSMD1-211ENST00000523062 GALR1P47211 349 aa5.33□□□□□ -1.56
CSMD1-211ENST00000523062 GNG4P50150 75 aa5.33□□□□□ -1.56
CSMD1-211ENST00000523062 TAS2R60P59551 318 aa5.33□□□□□ -1.56
CSMD1-211ENST00000523062 ATP5G2Q06055 141 aa5.33□□□□□ -1.56
CSMD1-211ENST00000523062 DEFB112Q30KQ8 113 aa5.33□□□□□ -1.56
CSMD1-211ENST00000523062 CENPWQ5EE01 88 aa5.33□□□□□ -1.56
CSMD1-211ENST00000523062 LEMD1Q68G75 181 aa5.33□□□□□ -1.56
CSMD1-211ENST00000523062 CYB5R2Q6BCY4 276 aa5.33□□□□□ -1.56
CSMD1-211ENST00000523062 ZNF343Q6P1L6 599 aa5.33□□□□□ -1.56
CSMD1-211ENST00000523062 BPIFA4PQ86YQ2 179 aa5.33□□□□□ -1.56
CSMD1-211ENST00000523062 TEX29Q8N6K0 151 aa5.33□□□□□ -1.56
CSMD1-211ENST00000523062 C5orf17Q8NAS9 161 aa5.33□□□□□ -1.56
CSMD1-211ENST00000523062 BLNKQ8WV28 456 aa5.33□□□□□ -1.56
CSMD1-211ENST00000523062 ZNF580Q9UK33 172 aa5.33□□□□□ -1.56
CSMD1-211ENST00000523062 CDC42EP3Q9UKI2 254 aa5.33□□□□□ -1.56
CSMD1-211ENST00000523062 URGCP-MRPS24S4R325 110 aa5.33□□□□□ -1.56
CSMD1-211ENST00000523062 NAV2Q8IVL1 2488 aa5.33□□□□□ -1.56
CSMD1-211ENST00000523062 USP9YO00507 2555 aaPredicted RBP5.32□□□□□ -1.56
CSMD1-211ENST00000523062 TRBV24-1A0A075B6N3 115 aa5.32□□□□□ -1.56
CSMD1-211ENST00000523062 TGIF2-C20orf24A0A0A6YYL0 155 aa5.32□□□□□ -1.56
CSMD1-211ENST00000523062 PGPEP1LA6NFU8 196 aa5.32□□□□□ -1.56
CSMD1-211ENST00000523062 ZNF98A6NK75 572 aa5.32□□□□□ -1.56
CSMD1-211ENST00000523062 S100A9P06702 114 aaKnown RBP5.32□□□□□ -1.56
CSMD1-211ENST00000523062 CTSGP08311 255 aa5.32□□□□□ -1.56
CSMD1-211ENST00000523062 CXCL1P09341 107 aa5.32□□□□□ -1.56
CSMD1-211ENST00000523062 IGLC2P0DOY2 106 aa5.32□□□□□ -1.56
CSMD1-211ENST00000523062 RPS10P46783 165 aaKnown RBP5.32□□□□□ -1.56
CSMD1-211ENST00000523062 RANP62826 216 aaKnown RBP5.32□□□□□ -1.56
CSMD1-211ENST00000523062 RELQ04864 619 aaPredicted RBP5.32□□□□□ -1.56
CSMD1-211ENST00000523062 USF2Q15853 346 aaPredicted RBP5.32□□□□□ -1.56
CSMD1-211ENST00000523062 TEX38Q6PEX7 206 aa5.32□□□□□ -1.56
CSMD1-211ENST00000523062 KCNIP4Q6PIL6 250 aa5.32□□□□□ -1.56
CSMD1-211ENST00000523062 OR10G8Q8NGN5 311 aa5.32□□□□□ -1.56
CSMD1-211ENST00000523062 OCC1Q8TAD7 63 aa5.32□□□□□ -1.56
CSMD1-211ENST00000523062 SFRP2Q96HF1 295 aa5.32□□□□□ -1.56
CSMD1-211ENST00000523062 BTF3L4Q96K17 158 aa5.32□□□□□ -1.56
CSMD1-211ENST00000523062 FAM210BQ96KR6 192 aa5.32□□□□□ -1.56
CSMD1-211ENST00000523062 IGF2BP2-AS1Q96M15 143 aa5.32□□□□□ -1.56
CSMD1-211ENST00000523062 CCDC140Q96MF4 163 aa5.32□□□□□ -1.56
CSMD1-211ENST00000523062 IMMP2LQ96T52 175 aa5.32□□□□□ -1.56
CSMD1-211ENST00000523062 ATG101Q9BSB4 218 aa5.32□□□□□ -1.56
CSMD1-211ENST00000523062 CHRDL1Q9BU40 450 aa5.32□□□□□ -1.56
CSMD1-211ENST00000523062 Q9H3A6 140 aa5.32□□□□□ -1.56
CSMD1-211ENST00000523062 OTORQ9NRC9 128 aa5.32□□□□□ -1.56
CSMD1-211ENST00000523062 RABAC1Q9UI14 185 aa5.32□□□□□ -1.56
CSMD1-211ENST00000523062 ANKRD17O75179 2603 aaKnown RBP5.32□□□□□ -1.56
CSMD1-211ENST00000523062 PRRC2AP48634 2157 aaKnown RBP5.32□□□□□ -1.56
CSMD1-211ENST00000523062 CREBBPQ92793 2442 aa5.32□□□□□ -1.56
CSMD1-211ENST00000523062 DOPEY2Q9Y3R5 2298 aa5.31□□□□□ -1.56
CSMD1-211ENST00000523062 TRBV19A0A075B6N1 114 aa5.31□□□□□ -1.56
CSMD1-211ENST00000523062 PGPA6NDG6 321 aa5.31□□□□□ -1.56
CSMD1-211ENST00000523062 GGCTO75223 188 aaKnown RBP5.31□□□□□ -1.56
CSMD1-211ENST00000523062 GCGP01275 180 aa5.31□□□□□ -1.56
CSMD1-211ENST00000523062 IGHV4-59P01825 116 aa5.31□□□□□ -1.56
CSMD1-211ENST00000523062 TRGV3P03979 118 aa5.31□□□□□ -1.56
CSMD1-211ENST00000523062 CLEC3BP05452 202 aa5.31□□□□□ -1.56
CSMD1-211ENST00000523062 PFN1P07737 140 aaKnown RBP5.31□□□□□ -1.56
CSMD1-211ENST00000523062 RPL7P18124 248 aaKnown RBP5.31□□□□□ -1.56
CSMD1-211ENST00000523062 HNF1AP20823 631 aa5.31□□□□□ -1.56
CSMD1-211ENST00000523062 PPIFP30405 207 aaKnown RBP5.31□□□□□ -1.56
CSMD1-211ENST00000523062 IER3P46695 156 aa5.31□□□□□ -1.56
CSMD1-211ENST00000523062 RAB9AP51151 201 aa5.31□□□□□ -1.56
CSMD1-211ENST00000523062 TPPP2P59282 170 aa5.31□□□□□ -1.56
CSMD1-211ENST00000523062 UBE2G1P62253 170 aa5.31□□□□□ -1.56
CSMD1-211ENST00000523062 GNG5P63218 68 aa5.31□□□□□ -1.56
CSMD1-211ENST00000523062 PDE6HQ13956 83 aa5.31□□□□□ -1.56
CSMD1-211ENST00000523062 TMEM183BQ1AE95 376 aa5.31□□□□□ -1.56
CSMD1-211ENST00000523062 CLEC19AQ6UXS0 136 aa5.31□□□□□ -1.56
CSMD1-211ENST00000523062 BCL6BQ8N143 479 aaPredicted RBP5.31□□□□□ -1.56
CSMD1-211ENST00000523062 LYPD1Q8N2G4 141 aa5.31□□□□□ -1.56
CSMD1-211ENST00000523062 CMTM2Q8TAZ6 248 aa5.31□□□□□ -1.56
CSMD1-211ENST00000523062 SMIM12Q96EX1 92 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms