RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 PRNDQ9UKY0 176 aa4.02□□□□□ -1.77
CTNNA1-216ENST00000519489 TRGV11A0A075B6L2 103 aa4.01□□□□□ -1.77
CTNNA1-216ENST00000519489 TRAV8-1A0A0A6YYK1 113 aa4.01□□□□□ -1.77
CTNNA1-216ENST00000519489 TRAV8-6A0A0B4J262 113 aa4.01□□□□□ -1.77
CTNNA1-216ENST00000519489 PNMA8CA0A1B0GUJ8 204 aa4.01□□□□□ -1.77
CTNNA1-216ENST00000519489 LINC00854A0A1B0GVQ3 168 aa4.01□□□□□ -1.77
CTNNA1-216ENST00000519489 USP17L23D6RBM5 183 aa4.01□□□□□ -1.77
CTNNA1-216ENST00000519489 TAAR5O14804 337 aa4.01□□□□□ -1.77
CTNNA1-216ENST00000519489 GSTZ1O43708 216 aaPredicted RBP4.01□□□□□ -1.77
CTNNA1-216ENST00000519489 TSPAN13O95857 204 aa4.01□□□□□ -1.77
CTNNA1-216ENST00000519489 LPAR6P43657 344 aa4.01□□□□□ -1.77
CTNNA1-216ENST00000519489 ETV1P50549 477 aa4.01□□□□□ -1.77
CTNNA1-216ENST00000519489 PPT1P50897 306 aa4.01□□□□□ -1.77
CTNNA1-216ENST00000519489 TOR2AQ5JU69 321 aa4.01□□□□□ -1.77
CTNNA1-216ENST00000519489 ZNF818PQ6ZRF7 136 aa4.01□□□□□ -1.77
CTNNA1-216ENST00000519489 IQCF2Q8IXL9 164 aa4.01□□□□□ -1.77
CTNNA1-216ENST00000519489 C10orf67Q8IYJ2 551 aa4.01□□□□□ -1.77
CTNNA1-216ENST00000519489 NKAIN3Q8N8D7 197 aa4.01□□□□□ -1.77
CTNNA1-216ENST00000519489 SECTM1Q8WVN6 248 aa4.01□□□□□ -1.77
CTNNA1-216ENST00000519489 DPH3Q96FX2 82 aa4.01□□□□□ -1.77
CTNNA1-216ENST00000519489 RNF185Q96GF1 192 aa4.01□□□□□ -1.77
CTNNA1-216ENST00000519489 RSG1Q9BU20 258 aa4.01□□□□□ -1.77
CTNNA1-216ENST00000519489 SLC25A32Q9H2D1 315 aa4.01□□□□□ -1.77
CTNNA1-216ENST00000519489 TP53TG3Q9ULZ0 132 aa4.01□□□□□ -1.77
CTNNA1-216ENST00000519489 TRAV12-3A0A0B4J271 114 aa4□□□□□ -1.77
CTNNA1-216ENST00000519489 J3KRW8 73 aa4□□□□□ -1.77
CTNNA1-216ENST00000519489 SNAPC5O75971 98 aa4□□□□□ -1.77
CTNNA1-216ENST00000519489 IGKV1-39P01597 117 aa4□□□□□ -1.77
CTNNA1-216ENST00000519489 IGKV1D-39P04432 117 aa4□□□□□ -1.77
CTNNA1-216ENST00000519489 RD3LP0DJH9 198 aa4□□□□□ -1.77
CTNNA1-216ENST00000519489 ZNF182P17025 639 aaPredicted RBP4□□□□□ -1.77
CTNNA1-216ENST00000519489 OPRK1P41145 380 aa4□□□□□ -1.77
CTNNA1-216ENST00000519489 RPL5P46777 297 aaKnown RBP4□□□□□ -1.77
CTNNA1-216ENST00000519489 HSPA13P48723 471 aa4□□□□□ -1.77
CTNNA1-216ENST00000519489 HSPE1P61604 102 aaKnown RBP4□□□□□ -1.77
CTNNA1-216ENST00000519489 SUPT4H1P63272 117 aaKnown RBP4□□□□□ -1.77
CTNNA1-216ENST00000519489 ST3GAL4Q11206 333 aa4□□□□□ -1.77
CTNNA1-216ENST00000519489 DGAT2L7PQ6IED9 249 aa4□□□□□ -1.77
CTNNA1-216ENST00000519489 Q6ZQT7 251 aa4□□□□□ -1.77
CTNNA1-216ENST00000519489 CROCCP2Q86T23 111 aa4□□□□□ -1.77
CTNNA1-216ENST00000519489 DEFB107AQ8IZN7 70 aa4□□□□□ -1.77
CTNNA1-216ENST00000519489 ZNF485Q8NCK3 441 aa4□□□□□ -1.77
CTNNA1-216ENST00000519489 OR56B1Q8NGI3 324 aa4□□□□□ -1.77
CTNNA1-216ENST00000519489 TMEM170AQ8WVE7 144 aa4□□□□□ -1.77
CTNNA1-216ENST00000519489 PCNPQ8WW12 178 aaKnown RBP4□□□□□ -1.77
CTNNA1-216ENST00000519489 CIB1Q99828 191 aa4□□□□□ -1.77
CTNNA1-216ENST00000519489 TXNDC17Q9BRA2 123 aa4□□□□□ -1.77
CTNNA1-216ENST00000519489 URM1Q9BTM9 101 aaKnown RBP4□□□□□ -1.77
CTNNA1-216ENST00000519489 PBDC1Q9BVG4 233 aa4□□□□□ -1.77
CTNNA1-216ENST00000519489 A0A075B6Q4 140 aa3.99□□□□□ -1.77
CTNNA1-216ENST00000519489 TRAV30A0A087WSZ9 112 aa3.99□□□□□ -1.77
CTNNA1-216ENST00000519489 TRGV4A0A0C4DH28 118 aa3.99□□□□□ -1.77
CTNNA1-216ENST00000519489 PRAC2D3DTV9 90 aa3.99□□□□□ -1.77
CTNNA1-216ENST00000519489 ORM1P02763 201 aa3.99□□□□□ -1.77
CTNNA1-216ENST00000519489 KRTAP1-4P0C5Y4 121 aa3.99□□□□□ -1.77
CTNNA1-216ENST00000519489 GABRB1P18505 474 aa3.99□□□□□ -1.77
CTNNA1-216ENST00000519489 TCL1AP56279 114 aa3.99□□□□□ -1.77
CTNNA1-216ENST00000519489 ERVK-16P61578 105 aa3.99□□□□□ -1.77
CTNNA1-216ENST00000519489 MSMO1Q15800 293 aa3.99□□□□□ -1.77
CTNNA1-216ENST00000519489 BSXQ3C1V8 233 aa3.99□□□□□ -1.77
CTNNA1-216ENST00000519489 C1orf194Q5T5A4 169 aa3.99□□□□□ -1.77
CTNNA1-216ENST00000519489 LCE1AQ5T7P2 110 aa3.99□□□□□ -1.77
CTNNA1-216ENST00000519489 ATRAIDQ6UW56 229 aa3.99□□□□□ -1.77
CTNNA1-216ENST00000519489 INO80EQ8NBZ0 244 aaPredicted RBP3.99□□□□□ -1.77
CTNNA1-216ENST00000519489 ZNF738Q8NE65 137 aa3.99□□□□□ -1.77
CTNNA1-216ENST00000519489 NPIPB3Q92617 1050 aa3.99□□□□□ -1.77
CTNNA1-216ENST00000519489 RETNLBQ9BQ08 111 aa3.99□□□□□ -1.77
CTNNA1-216ENST00000519489 C20orf144Q9BQM9 153 aa3.99□□□□□ -1.77
CTNNA1-216ENST00000519489 IGKV1D-37A0A075B6S9 117 aa3.98□□□□□ -1.77
CTNNA1-216ENST00000519489 INS-IGF2F8WCM5 200 aa3.98□□□□□ -1.77
CTNNA1-216ENST00000519489 ATG12O94817 140 aa3.98□□□□□ -1.77
CTNNA1-216ENST00000519489 ERHP84090 104 aaKnown RBP3.98□□□□□ -1.77
CTNNA1-216ENST00000519489 ZNF90Q03938 601 aa3.98□□□□□ -1.77
CTNNA1-216ENST00000519489 AADACL3Q5VUY0 350 aa3.98□□□□□ -1.77
CTNNA1-216ENST00000519489 SLC35G3Q8N808 338 aa3.98□□□□□ -1.77
CTNNA1-216ENST00000519489 NHLRC2Q8NBF2 726 aa3.98□□□□□ -1.77
CTNNA1-216ENST00000519489 Q8TAT8 98 aa3.98□□□□□ -1.77
CTNNA1-216ENST00000519489 ZNF431Q8TF32 576 aaPredicted RBP3.98□□□□□ -1.77
CTNNA1-216ENST00000519489 NRG4Q8WWG1 115 aa3.98□□□□□ -1.77
CTNNA1-216ENST00000519489 RAB3CQ96E17 227 aa3.98□□□□□ -1.77
CTNNA1-216ENST00000519489 MRPL48Q96GC5 212 aaKnown RBP3.98□□□□□ -1.77
CTNNA1-216ENST00000519489 SEC22AQ96IW7 307 aa3.98□□□□□ -1.77
CTNNA1-216ENST00000519489 GABARAPL3Q9BY60 117 aa3.98□□□□□ -1.77
CTNNA1-216ENST00000519489 FKBP11Q9NYL4 201 aa3.98□□□□□ -1.77
CTNNA1-216ENST00000519489 HIST1H1DP16402 221 aaKnown RBP3.97□□□□□ -1.77
CTNNA1-216ENST00000519489 F2RP25116 425 aa3.97□□□□□ -1.77
CTNNA1-216ENST00000519489 GYS2P54840 703 aa3.97□□□□□ -1.77
CTNNA1-216ENST00000519489 RPL19P84098 196 aaKnown RBP3.97□□□□□ -1.77
CTNNA1-216ENST00000519489 TPRXLQ17RH7 258 aa3.97□□□□□ -1.77
CTNNA1-216ENST00000519489 ASB16-AS1Q495Z4 193 aa3.97□□□□□ -1.77
CTNNA1-216ENST00000519489 C14orf177Q52M58 125 aa3.97□□□□□ -1.77
CTNNA1-216ENST00000519489 HSD17B12Q53GQ0 312 aa3.97□□□□□ -1.77
CTNNA1-216ENST00000519489 OR8G2PQ6IF36 304 aa3.97□□□□□ -1.77
CTNNA1-216ENST00000519489 FAM122CQ6P4D5 195 aa3.97□□□□□ -1.77
CTNNA1-216ENST00000519489 OR8I2Q8N0Y5 310 aa3.97□□□□□ -1.77
CTNNA1-216ENST00000519489 Q8N9P0 234 aaPredicted RBP3.97□□□□□ -1.77
CTNNA1-216ENST00000519489 SLC24A4Q8NFF2 622 aa3.97□□□□□ -1.77
CTNNA1-216ENST00000519489 RRNAD1Q96FB5 475 aaKnown RBP3.97□□□□□ -1.77
CTNNA1-216ENST00000519489 CENPNQ96H22 339 aaPredicted RBP3.97□□□□□ -1.77
CTNNA1-216ENST00000519489 SLC5A7Q9GZV3 580 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms