RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 TNFP01375 233 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 IGLV3-27P01718 113 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 SRP19P09132 144 aaKnown RBP2.1□□□□□ -2.07
VPS13B-207ENST00000518569 NFYBP25208 207 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 IL3RAP26951 378 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 PSMB8P28062 276 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 BRS3P32247 399 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 ZNF93P35789 620 aaPredicted RBP2.1□□□□□ -2.07
VPS13B-207ENST00000518569 ETV6P41212 452 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 DEFA3P59666 94 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 S100A10P60903 97 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 TMEM258P61165 79 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 YPEL3P61236 119 aaPredicted RBP2.1□□□□□ -2.07
VPS13B-207ENST00000518569 RRN3P1Q2M238 152 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 MEIG1Q5JSS6 88 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 HES3Q5TGS1 186 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 C1orf140Q5VVS0 124 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 Q5W150 140 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 GUSBP11Q6P575 273 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 SLC25A34Q6PIV7 304 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 LCN15Q6UWW0 184 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 LINC00299Q6ZSB3 139 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 GKN2Q86XP6 184 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 ATOH7Q8N100 152 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 SVBPQ8N300 66 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 TEX29Q8N6K0 151 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 PACRGLQ8N7B6 248 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 APCDD1LQ8NCL9 501 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 OR5D16Q8NGK9 328 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 OR5D14Q8NGL3 314 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 OR2T10Q8NGZ9 312 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 RAB37Q96AX2 223 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 TEX37Q96LM6 180 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 MCEEQ96PE7 176 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 YPEL2Q96QA6 119 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 GPX7Q96SL4 187 aaPredicted RBP2.1□□□□□ -2.07
VPS13B-207ENST00000518569 DERL1Q9BUN8 251 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 SNRNP25Q9BV90 132 aaKnown RBP2.1□□□□□ -2.07
VPS13B-207ENST00000518569 C11orf68Q9H3H3 251 aaKnown RBP2.1□□□□□ -2.07
VPS13B-207ENST00000518569 RPRMQ9NS64 109 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 FUT9Q9Y231 359 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 MPC1Q9Y5U8 109 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 DDX60Q8IY21 1712 aaKnown RBP2.1□□□□□ -2.07
VPS13B-207ENST00000518569 CFAP54Q96N23 3096 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 LAMB1P07942 1786 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 NUP98P52948 1817 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 ECM29Q5VYK3 1845 aa2.1□□□□□ -2.07
VPS13B-207ENST00000518569 SPTBN4Q9H254 2564 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 BAHCC1Q9P281 2608 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 COL4A5P29400 1685 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 OTOFQ9HC10 1997 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 LOC102724200A0A096LPH7 203 aaPredicted RBP2.09□□□□□ -2.07
VPS13B-207ENST00000518569 CCL15-CCL14A0A0B4J2E2 113 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 IGHV1-58A0A0C4DH39 117 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 A8MWV9 139 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 IGLL5B9A064 214 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 C4orf51C9J302 202 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 NDUFC2-KCTD14E9PQ53 114 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 FNDC10F2Z333 226 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 G3V3Q6 166 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 H0YJW9 148 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 H7BYZ3 331 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 LST1O00453 97 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 COX7A2LO14548 114 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 NDUFB2O95178 105 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 HLA-DQB1P01920 261 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 CD2P06729 351 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 CD7P09564 240 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 LINC00032P0C843 101 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 LINC00869P0C866 280 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 IGLC6P0CF74 106 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 LINC00694P0DN24 101 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 IGHV1-8P0DP01 117 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 FABP2P12104 132 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 CSRP1P21291 193 aaKnown RBP2.09□□□□□ -2.07
VPS13B-207ENST00000518569 HIST1H2BOP23527 126 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 HIST1H2BBP33778 126 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 POLR2IP36954 125 aaKnown RBP2.09□□□□□ -2.07
VPS13B-207ENST00000518569 SRP14P37108 136 aaKnown RBP2.09□□□□□ -2.07
VPS13B-207ENST00000518569 AKR1C2P52895 323 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 HIST1H2BDP58876 126 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 RPL26P61254 145 aaKnown RBP2.09□□□□□ -2.07
VPS13B-207ENST00000518569 HIST1H2BCP62807 126 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 PLGLB1Q02325 96 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 MOBPQ13875 183 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 HIST2H2BEQ16778 126 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.09□□□□□ -2.07
VPS13B-207ENST00000518569 TMEM244Q5VVB8 128 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 SCXQ7RTU7 201 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 LINC00305Q7Z4B0 112 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 FAM19A3Q7Z5A8 133 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 DEFB123Q8N688 67 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 OR4A5Q8NH83 315 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 LMX1AQ8TE12 382 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 RAB2BQ8WUD1 216 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 RBPMSQ93062 196 aaKnown RBP2.09□□□□□ -2.07
VPS13B-207ENST00000518569 HIST1H2BHQ93079 126 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 ERMAPQ96PL5 475 aaPredicted RBP2.09□□□□□ -2.07
VPS13B-207ENST00000518569 HIST1H2BNQ99877 126 aa2.09□□□□□ -2.07
VPS13B-207ENST00000518569 HIST1H2BMQ99879 126 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 620.3 ms