RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 ZNF79Q15937 498 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 ACOT6Q3I5F7 207 aaPredicted RBP2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 TDRG1Q3Y452 100 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 OR2B11Q5JQS5 317 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 SAMD13Q5VXD3 122 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 CNIH2Q6PI25 160 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 SIGLEC15Q6ZMC9 328 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 ZNF493Q6ZR52 646 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 ZNF709Q8N972 641 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 OR4C16Q8NGL9 310 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 OR10J6PQ8NGY7 276 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 BORCS5Q969J3 196 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 TMEM230Q96A57 120 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 PRAC1Q96KF2 57 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 LINC00479Q96M42 142 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 TSC22D3Q99576 134 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 TMEM208Q9BTX3 173 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 AMBNQ9NP70 447 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 COMMD9Q9P000 198 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 RAB22AQ9UL26 194 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 PYGO1Q9Y3Y4 419 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 TIMM8BQ9Y5J9 83 aaPredicted RBP2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 ORC6Q9Y5N6 252 aa2.43□□□□□ -2.02
PDLIM5-218ENST00000513341 TRAV18A0A075B6X5 111 aa2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 TRAV26-1A0A087WT03 109 aa2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 A0A087X002 238 aa2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 A8MTW9 85 aa2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 CORTO00230 105 aa2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 MFNGO00587 321 aa2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 SLC17A2O00624 439 aa2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 GSTZ1O43708 216 aaPredicted RBP2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 CLN5O75503 358 aa2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 DNAH10OSP0CZ25 163 aa2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 MYL12AP19105 171 aa2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 GADD45AP24522 165 aa2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 RPL5P46777 297 aaKnown RBP2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 SUB1P53999 127 aaKnown RBP eCLIP2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 ERHP84090 104 aaKnown RBP2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 GDF5OSQ5U4N7 250 aa2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 EBLN2Q6P2I7 272 aa2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 TMEM256Q8N2U0 113 aa2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 ZFP41Q8N8Y5 198 aa2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 OR4B1Q8NGF8 309 aa2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 Q8WTZ3 238 aa2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 CCDC124Q96CT7 223 aaKnown RBP2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 RAB3CQ96E17 227 aa2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 CENPNQ96H22 339 aaPredicted RBP2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 HINT2Q9BX68 163 aa2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 SLC35B3Q9H1N7 401 aa2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 MED4Q9NPJ6 270 aa2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 TAS2R8Q9NYW2 309 aa2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 CACNG5Q9UF02 275 aa2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 PRNDQ9UKY0 176 aa2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 DIMT1Q9UNQ2 313 aaKnown RBP2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 POMPQ9Y244 141 aa2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 ARL2BPQ9Y2Y0 163 aa2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 AP4S1Q9Y587 144 aa2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 OR51B2Q9Y5P1 312 aa2.42□□□□□ -2.02
PDLIM5-218ENST00000513341 MUC2Q02817 5179 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 TRAV5A0A0B4J249 113 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 IGKV1D-13A0A0B4J2D9 117 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 A0A0J9YX75 114 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 A0A0U1RQV1 116 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 NDUFAF8A1L188 74 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 PLAC8L1A1L4L8 177 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 LRCOL1A6NCL2 159 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 METTL21EPA6NDL7 271 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 EFCAB10A6NFE3 127 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 SNURFLB1AK76 121 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 INS-IGF2F8WCM5 200 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 J3QRK9 145 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 ZNF701M0R085 212 aaPredicted RBP2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 ISLRO14498 428 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 ATP8B1O43520 1251 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 IGLV2-8P01709 118 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 MT1HL1P0DM35 61 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 IGKV1-13P0DP09 117 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 EVI2AP22794 236 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 NFYAP23511 347 aaPredicted RBP2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 F2RP25116 425 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 NUP62P37198 522 aaPredicted RBP2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 SNCAP37840 140 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 CAMLGP49069 296 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 PSMB3P49720 205 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 WNT4P56705 351 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 FXYD7P58549 80 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 TAS2R60P59551 318 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 YPEL3P61236 119 aaPredicted RBP2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 ERVK-16P61578 105 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 HSPE1P61604 102 aaKnown RBP2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 HAMPP81172 84 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 PRCDQ00LT1 54 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 HSD17B12Q53GQ0 312 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 FAM78BQ5VT40 261 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 Q6ZRU5 148 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 C10orf126Q8N4M7 172 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 LINC00612Q8N6U2 182 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 Q8N814 137 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 OR10R2Q8NGX6 335 aa2.41□□□□□ -2.02
PDLIM5-218ENST00000513341 OR4X1Q8NH49 305 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms