RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 C22orf46C9J442 243 aa3.42□□□□□ -1.86
VCAN-209ENST00000513016 TYMSP04818 313 aa3.42□□□□□ -1.86
VCAN-209ENST00000513016 FOXA3P55318 350 aaPredicted RBP3.42□□□□□ -1.86
VCAN-209ENST00000513016 SRSF2Q01130 221 aaKnown RBP3.42□□□□□ -1.86
VCAN-209ENST00000513016 TSKUQ8WUA8 353 aa3.42□□□□□ -1.86
VCAN-209ENST00000513016 OVOL2Q9BRP0 275 aa3.42□□□□□ -1.86
VCAN-209ENST00000513016 TM2D2Q9BX73 214 aa3.42□□□□□ -1.86
VCAN-209ENST00000513016 MRPL16Q9NX20 251 aaKnown RBP3.42□□□□□ -1.86
VCAN-209ENST00000513016 TRAV25A0A0B4J276 109 aa3.42□□□□□ -1.86
VCAN-209ENST00000513016 MUC21A0A0G2JKD1 596 aa3.42□□□□□ -1.86
VCAN-209ENST00000513016 MUC21A0A140T8X8 626 aa3.42□□□□□ -1.86
VCAN-209ENST00000513016 IGHV4-59P01825 116 aa3.42□□□□□ -1.86
VCAN-209ENST00000513016 TREML4Q6UXN2 200 aa3.42□□□□□ -1.86
VCAN-209ENST00000513016 SMAD5-AS1Q9Y6J3 95 aa3.42□□□□□ -1.86
VCAN-209ENST00000513016 IGKV1-27A0A075B6S5 117 aa3.42□□□□□ -1.86
VCAN-209ENST00000513016 IGHV7-4-1A0A0J9YVY3 117 aa3.42□□□□□ -1.86
VCAN-209ENST00000513016 TCRAP04437 139 aa3.42□□□□□ -1.86
VCAN-209ENST00000513016 WT1P19544 449 aaPredicted RBP3.42□□□□□ -1.86
VCAN-209ENST00000513016 PPIFP30405 207 aaKnown RBP3.42□□□□□ -1.86
VCAN-209ENST00000513016 LURAP1LQ8IV03 231 aa3.42□□□□□ -1.86
VCAN-209ENST00000513016 ARL6IP6Q8N6S5 226 aa3.42□□□□□ -1.86
VCAN-209ENST00000513016 NKAPP1Q8N9T2 125 aa3.42□□□□□ -1.86
VCAN-209ENST00000513016 PRO1933Q9H354 126 aa3.42□□□□□ -1.86
VCAN-209ENST00000513016 GAGE12BA1L429 117 aa3.42□□□□□ -1.86
VCAN-209ENST00000513016 GAGE7O76087 117 aa3.42□□□□□ -1.86
VCAN-209ENST00000513016 GAGE12FP0CL80 117 aa3.42□□□□□ -1.86
VCAN-209ENST00000513016 GAGE12GP0CL81 117 aa3.42□□□□□ -1.86
VCAN-209ENST00000513016 GAGE12IP0CL82 117 aa3.42□□□□□ -1.86
VCAN-209ENST00000513016 COL5A1-AS1Q5SY13 56 aa3.42□□□□□ -1.86
VCAN-209ENST00000513016 TMEM243Q9BU79 118 aa3.42□□□□□ -1.86
VCAN-209ENST00000513016 AHCTF1Q8WYP5 2266 aa3.42□□□□□ -1.86
VCAN-209ENST00000513016 IGHV4-39P01824 125 aa3.42□□□□□ -1.86
VCAN-209ENST00000513016 LAGE3Q14657 143 aa3.42□□□□□ -1.86
VCAN-209ENST00000513016 OTOFQ9HC10 1997 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 ZDBF2Q9HCK1 2354 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.41□□□□□ -1.86
VCAN-209ENST00000513016 GAGE10A6NGK3 116 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 FOXI2Q6ZQN5 318 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 ZNF493Q6ZR52 646 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 TMEM14BQ9NUH8 114 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 A0A0A6YYD4 124 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 NDUFA3O95167 84 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 SRP19P09132 144 aaKnown RBP3.41□□□□□ -1.86
VCAN-209ENST00000513016 CDKN1BP46527 198 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 OR2K2Q8NGT1 345 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 PIFOQ8TCI5 191 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 C1orf159Q96HA4 380 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 DOCK6Q96HP0 2047 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 SEC16AO15027 2179 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 CACNA1BQ00975 2339 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 MYMXA0A1B0GTQ4 84 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 C5orf63A6NC05 138 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 GAGE12JA6NER3 117 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 J3QRE1 110 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 H2BFSP57053 126 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 GAGE1Q13065 139 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 GAGE4Q13068 117 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 GAGE5Q13069 117 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 GAGE13Q4V321 117 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 LY6G6FQ5SQ64 297 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 CBLN2Q8IUK8 224 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 IGHV3-73A0A0B4J1V6 119 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 TMEM238C9JI98 176 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 G3V318 75 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 SH2D1AO60880 128 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 SMIM6P0DI80 62 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 HOXB4P17483 251 aaPredicted RBP3.41□□□□□ -1.86
VCAN-209ENST00000513016 RHOHQ15669 191 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 MTURNQ8N3F0 131 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 RNF152Q8N8N0 203 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 CITED2Q99967 270 aaPredicted RBP3.41□□□□□ -1.86
VCAN-209ENST00000513016 LAMTOR2Q9Y2Q5 125 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 ASCC3Q8N3C0 2202 aaKnown RBP3.41□□□□□ -1.86
VCAN-209ENST00000513016 Q6ZR03 302 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 Q6ZWC4 215 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 LY6G5BQ8NDX9 201 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 OR11H6Q8NGC7 330 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 CHCHD1Q96BP2 118 aaKnown RBP3.41□□□□□ -1.86
VCAN-209ENST00000513016 PRO3102Q9H379 93 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 LIME1Q9H400 295 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 CENPVL3A0A0U1RRI6 287 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 A0A1W2PPI3 338 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 SHISA3A0PJX4 238 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 SLC17A3O00476 420 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 CD5LO43866 347 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 NMBP08949 121 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 PAX9P55771 341 aa3.41□□□□□ -1.86
VCAN-209ENST00000513016 ANKRD36A6QL64 1941 aa3.4□□□□□ -1.86
VCAN-209ENST00000513016 ATP5G1P05496 136 aa3.4□□□□□ -1.86
VCAN-209ENST00000513016 TMEM14EPQ6UXP3 125 aa3.4□□□□□ -1.86
VCAN-209ENST00000513016 LHFPL1Q86WI0 220 aa3.4□□□□□ -1.86
VCAN-209ENST00000513016 ANAPC10Q9UM13 185 aa3.4□□□□□ -1.86
VCAN-209ENST00000513016 A0A087X0M5 115 aa3.4□□□□□ -1.86
VCAN-209ENST00000513016 TRAV5A0A0B4J249 113 aa3.4□□□□□ -1.86
VCAN-209ENST00000513016 A0A1B0GX30 115 aa3.4□□□□□ -1.86
VCAN-209ENST00000513016 MDKP21741 143 aaPredicted RBP3.4□□□□□ -1.86
VCAN-209ENST00000513016 MRPL23Q16540 153 aaKnown RBP3.4□□□□□ -1.86
VCAN-209ENST00000513016 SPINK13Q1W4C9 94 aa3.4□□□□□ -1.86
VCAN-209ENST00000513016 THAP8Q8NA92 274 aa3.4□□□□□ -1.86
VCAN-209ENST00000513016 LY96Q9Y6Y9 160 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms