RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, human

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD1-208	ENST00000512392	CNEP1R1	Q8N9A8	125 aa		4.22	□□□□□ -1.73
CHD1-208	ENST00000512392	APCDD1L	Q8NCL9	501 aa		4.22	□□□□□ -1.73
CHD1-208	ENST00000512392	DSCR8	Q96T75	97 aa		4.22	□□□□□ -1.73
CHD1-208	ENST00000512392	C3orf85	A0A1B0GTC6	90 aa		4.22	□□□□□ -1.73
CHD1-208	ENST00000512392	GRIFIN	A4D1Z8	144 aa		4.22	□□□□□ -1.73
CHD1-208	ENST00000512392	CYSRT1	A8MQ03	144 aa		4.22	□□□□□ -1.73
CHD1-208	ENST00000512392	MCRIP1	C9JLW8	97 aa		4.22	□□□□□ -1.73
CHD1-208	ENST00000512392	SOD1	P00441	154 aa		4.22	□□□□□ -1.73
CHD1-208	ENST00000512392	CDK5R1	Q15078	307 aa		4.22	□□□□□ -1.73
CHD1-208	ENST00000512392		Q5BKY6	102 aa		4.22	□□□□□ -1.73
CHD1-208	ENST00000512392	ZNF660	Q6AZW8	331 aa	Predicted RBP	4.22	□□□□□ -1.73
CHD1-208	ENST00000512392	UNQ5815/PRO19632	Q6UWF5	114 aa		4.22	□□□□□ -1.73
CHD1-208	ENST00000512392		Q6ZS92	163 aa		4.22	□□□□□ -1.73
CHD1-208	ENST00000512392	LINC00574	Q9H8X3	128 aa		4.22	□□□□□ -1.73
CHD1-208	ENST00000512392	NPVF	Q9HCQ7	196 aa		4.22	□□□□□ -1.73
CHD1-208	ENST00000512392	ZNF222	Q9UK12	451 aa		4.22	□□□□□ -1.73
CHD1-208	ENST00000512392	SERP1	Q9Y6X1	66 aa		4.22	□□□□□ -1.73
CHD1-208	ENST00000512392	NOTCH4	Q99466	2003 aa		4.22	□□□□□ -1.73
CHD1-208	ENST00000512392	CFTR	P13569	1480 aa		4.21	□□□□□ -1.73
CHD1-208	ENST00000512392	ADGRB1	O14514	1584 aa		4.21	□□□□□ -1.74
CHD1-208	ENST00000512392	EML6	Q6ZMW3	1958 aa		4.21	□□□□□ -1.74
CHD1-208	ENST00000512392	TMEM262	E9PQX1	116 aa		4.21	□□□□□ -1.74
CHD1-208	ENST00000512392	FAM72C	H0Y354	149 aa		4.21	□□□□□ -1.74
CHD1-208	ENST00000512392	SLC25A20	O43772	301 aa		4.21	□□□□□ -1.74
CHD1-208	ENST00000512392	IGHV4-34	P06331	123 aa		4.21	□□□□□ -1.74
CHD1-208	ENST00000512392	C10orf91	Q5T1B1	145 aa		4.21	□□□□□ -1.74
CHD1-208	ENST00000512392	ZC2HC1B	Q5TFG8	222 aa		4.21	□□□□□ -1.74
CHD1-208	ENST00000512392	FAM72A	Q5TYM5	149 aa		4.21	□□□□□ -1.74
CHD1-208	ENST00000512392	FAM72D	Q6L9T8	149 aa		4.21	□□□□□ -1.74
CHD1-208	ENST00000512392		Q6P435	159 aa		4.21	□□□□□ -1.74
CHD1-208	ENST00000512392	FP248	Q71RG6	208 aa	Predicted RBP	4.21	□□□□□ -1.74
CHD1-208	ENST00000512392	C14orf178	Q8N769	122 aa	Predicted RBP	4.21	□□□□□ -1.74
CHD1-208	ENST00000512392	OR5AK2	Q8NH90	309 aa		4.21	□□□□□ -1.74
CHD1-208	ENST00000512392	SCGB3A1	Q96QR1	104 aa		4.21	□□□□□ -1.74
CHD1-208	ENST00000512392	CHD1	O14646	1710 aa		4.2	□□□□□ -1.74
CHD1-208	ENST00000512392	ZNFX1	Q9P2E3	1918 aa	Known RBP	4.2	□□□□□ -1.74
CHD1-208	ENST00000512392	ZNF737	O75373	536 aa		4.2	□□□□□ -1.74
CHD1-208	ENST00000512392	LY6H	O94772	140 aa		4.2	□□□□□ -1.74
CHD1-208	ENST00000512392	SLC25A16	P16260	332 aa		4.2	□□□□□ -1.74
CHD1-208	ENST00000512392		Q1RN00	199 aa		4.2	□□□□□ -1.74
CHD1-208	ENST00000512392	C10orf105	Q8TEF2	133 aa		4.2	□□□□□ -1.74
CHD1-208	ENST00000512392	SPANXD	Q9BXN6	97 aa		4.2	□□□□□ -1.74
CHD1-208	ENST00000512392	RPL26L1	Q9UNX3	145 aa	Known RBP	4.2	□□□□□ -1.74
CHD1-208	ENST00000512392	PIK3C2A	O00443	1686 aa		4.2	□□□□□ -1.74
CHD1-208	ENST00000512392	ZNF638	Q14966	1978 aa	Known RBP	4.2	□□□□□ -1.74
CHD1-208	ENST00000512392	DOCK8	Q8NF50	2099 aa		4.2	□□□□□ -1.74
CHD1-208	ENST00000512392	RIMBP3C	A6NJZ7	1639 aa		4.2	□□□□□ -1.74
CHD1-208	ENST00000512392	RIMBP3B	A6NNM3	1639 aa		4.2	□□□□□ -1.74
CHD1-208	ENST00000512392	RIMBP3	Q9UFD9	1639 aa		4.2	□□□□□ -1.74
CHD1-208	ENST00000512392	MYH6	P13533	1939 aa		4.2	□□□□□ -1.74
CHD1-208	ENST00000512392	ALPK3	Q96L96	1907 aa		4.2	□□□□□ -1.74
CHD1-208	ENST00000512392	COLCA2	A8K830	154 aa		4.2	□□□□□ -1.74
CHD1-208	ENST00000512392		M0R2P5	195 aa		4.2	□□□□□ -1.74
CHD1-208	ENST00000512392	FUS	P35637	526 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
CHD1-208	ENST00000512392	SUPT4H1	P63272	117 aa	Known RBP	4.2	□□□□□ -1.74
CHD1-208	ENST00000512392	DCD	P81605	110 aa	Known RBP	4.2	□□□□□ -1.74
CHD1-208	ENST00000512392	NOXRED1	Q6NXP6	359 aa		4.2	□□□□□ -1.74
CHD1-208	ENST00000512392	XAGE1A	Q9HD64	81 aa		4.2	□□□□□ -1.74
CHD1-208	ENST00000512392	TMEM106B	Q9NUM4	274 aa		4.2	□□□□□ -1.74
CHD1-208	ENST00000512392	OR5V1	Q9UGF6	321 aa		4.2	□□□□□ -1.74
CHD1-208	ENST00000512392		U3KQK5	164 aa		4.2	□□□□□ -1.74
CHD1-208	ENST00000512392	THOC2	Q8NI27	1593 aa	Known RBP	4.19	□□□□□ -1.74
CHD1-208	ENST00000512392	PSME4	Q14997	1843 aa		4.19	□□□□□ -1.74
CHD1-208	ENST00000512392		H3BMM0	161 aa		4.19	□□□□□ -1.74
CHD1-208	ENST00000512392	TRAC	P01848	142 aa		4.19	□□□□□ -1.74
CHD1-208	ENST00000512392	SLC25A4	P12235	298 aa		4.19	□□□□□ -1.74
CHD1-208	ENST00000512392	PTHLH	P12272	177 aa		4.19	□□□□□ -1.74
CHD1-208	ENST00000512392	TPT1	P13693	172 aa	Known RBP	4.19	□□□□□ -1.74
CHD1-208	ENST00000512392	KRTAP10-11	P60412	298 aa		4.19	□□□□□ -1.74
CHD1-208	ENST00000512392	C9orf129	Q5T035	196 aa	Known RBP	4.19	□□□□□ -1.74
CHD1-208	ENST00000512392	LINC01545	Q5VT33	79 aa		4.19	□□□□□ -1.74
CHD1-208	ENST00000512392	C10orf111	Q8N326	155 aa		4.19	□□□□□ -1.74
CHD1-208	ENST00000512392	UBE2W	Q96B02	151 aa		4.19	□□□□□ -1.74
CHD1-208	ENST00000512392	PLEKHH2	Q8IVE3	1493 aa		4.19	□□□□□ -1.74
CHD1-208	ENST00000512392	MYH9	P35579	1960 aa	Known RBP	4.18	□□□□□ -1.74
CHD1-208	ENST00000512392	CC2D2A	Q9P2K1	1620 aa		4.18	□□□□□ -1.74
CHD1-208	ENST00000512392	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.18	□□□□□ -1.74
CHD1-208	ENST00000512392	TRGV5	A0A0B4J1U4	118 aa		4.18	□□□□□ -1.74
CHD1-208	ENST00000512392	TMEM223	A0PJW6	202 aa		4.18	□□□□□ -1.74
CHD1-208	ENST00000512392		A6NDX4	124 aa		4.18	□□□□□ -1.74
CHD1-208	ENST00000512392		H3BQ15	152 aa		4.18	□□□□□ -1.74
CHD1-208	ENST00000512392	C19orf84	I3L1E1	186 aa		4.18	□□□□□ -1.74
CHD1-208	ENST00000512392	EDF1	O60869	148 aa	Known RBP	4.18	□□□□□ -1.74
CHD1-208	ENST00000512392	PCBD1	P61457	104 aa		4.18	□□□□□ -1.74
CHD1-208	ENST00000512392	HIST1H4A	P62805	103 aa	Known RBP	4.18	□□□□□ -1.74
CHD1-208	ENST00000512392	TDRG1	Q3Y452	100 aa		4.18	□□□□□ -1.74
CHD1-208	ENST00000512392	FAM229B	Q4G0N7	80 aa		4.18	□□□□□ -1.74
CHD1-208	ENST00000512392		Q8N9W7	124 aa		4.18	□□□□□ -1.74
CHD1-208	ENST00000512392	PFN4	Q8NHR9	129 aa		4.18	□□□□□ -1.74
CHD1-208	ENST00000512392	CLEC2B	Q92478	149 aa		4.18	□□□□□ -1.74
CHD1-208	ENST00000512392	REG4	Q9BYZ8	158 aa		4.18	□□□□□ -1.74
CHD1-208	ENST00000512392	BET1L	Q9NYM9	111 aa		4.18	□□□□□ -1.74
CHD1-208	ENST00000512392	ARHGAP5	Q13017	1502 aa		4.18	□□□□□ -1.74
CHD1-208	ENST00000512392	IGHV3-64D	A0A0J9YX35	117 aa		4.18	□□□□□ -1.74
CHD1-208	ENST00000512392	LOC107986453	A0A1B0GWG9	222 aa		4.18	□□□□□ -1.74
CHD1-208	ENST00000512392	SH2D1A	O60880	128 aa		4.18	□□□□□ -1.74
CHD1-208	ENST00000512392	IGHV1-69	P01742	117 aa		4.18	□□□□□ -1.74
CHD1-208	ENST00000512392	RBP4	P02753	201 aa		4.18	□□□□□ -1.74
CHD1-208	ENST00000512392	ZNF14	P17017	642 aa	Predicted RBP	4.18	□□□□□ -1.74
CHD1-208	ENST00000512392	BLCAP	P62952	87 aa		4.18	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms