RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 OR2T8A6NH00 312 aa0.72□□□□□ -2.29
TRAPPC11-207ENST00000511409 E7EUB6 86 aa0.72□□□□□ -2.29
TRAPPC11-207ENST00000511409 H3BRM9 83 aa0.72□□□□□ -2.29
TRAPPC11-207ENST00000511409 OR10J4P0C629 311 aa0.72□□□□□ -2.29
TRAPPC11-207ENST00000511409 DSCR4P56555 118 aaPredicted RBP0.72□□□□□ -2.29
TRAPPC11-207ENST00000511409 ARF6P62330 175 aa0.72□□□□□ -2.29
TRAPPC11-207ENST00000511409 SNCBQ16143 134 aa0.72□□□□□ -2.29
TRAPPC11-207ENST00000511409 SCGB2B2Q4G0G5 96 aa0.72□□□□□ -2.29
TRAPPC11-207ENST00000511409 AKR1C8PQ5T2L2 129 aa0.72□□□□□ -2.29
TRAPPC11-207ENST00000511409 DHRS4L2Q6PKH6 230 aa0.72□□□□□ -2.29
TRAPPC11-207ENST00000511409 ZNF833PQ6ZTB9 187 aa0.72□□□□□ -2.29
TRAPPC11-207ENST00000511409 EXOC3-AS1Q8N2X6 119 aa0.72□□□□□ -2.29
TRAPPC11-207ENST00000511409 RAB37Q96AX2 223 aa0.72□□□□□ -2.29
TRAPPC11-207ENST00000511409 MUCL1Q96DR8 90 aa0.72□□□□□ -2.29
TRAPPC11-207ENST00000511409 ZHX1-C8orf76Q96EF9 292 aa0.72□□□□□ -2.29
TRAPPC11-207ENST00000511409 TEX37Q96LM6 180 aa0.72□□□□□ -2.29
TRAPPC11-207ENST00000511409 CCDC94Q9BW85 323 aaPredicted RBP0.72□□□□□ -2.29
TRAPPC11-207ENST00000511409 OR2J1Q9GZK6 312 aa0.72□□□□□ -2.29
TRAPPC11-207ENST00000511409 PBOV1Q9GZY1 135 aa0.72□□□□□ -2.29
TRAPPC11-207ENST00000511409 POPDC3Q9HBV1 291 aa0.72□□□□□ -2.29
TRAPPC11-207ENST00000511409 PRNDQ9UKY0 176 aa0.72□□□□□ -2.29
TRAPPC11-207ENST00000511409 TNFSF18Q9UNG2 199 aa0.72□□□□□ -2.29
TRAPPC11-207ENST00000511409 LAMA4Q16363 1823 aa0.72□□□□□ -2.29
TRAPPC11-207ENST00000511409 KIAA1549Q9HCM3 1950 aa0.72□□□□□ -2.29
TRAPPC11-207ENST00000511409 CAMSAP1Q5T5Y3 1602 aa0.71□□□□□ -2.3
TRAPPC11-207ENST00000511409 DOCK4Q8N1I0 1966 aa0.71□□□□□ -2.3
TRAPPC11-207ENST00000511409 B4DSR2 109 aa0.71□□□□□ -2.3
TRAPPC11-207ENST00000511409 H7C1C5 153 aa0.71□□□□□ -2.3
TRAPPC11-207ENST00000511409 CRHP06850 196 aa0.71□□□□□ -2.3
TRAPPC11-207ENST00000511409 PRB4P10163 310 aaPredicted RBP0.71□□□□□ -2.3
TRAPPC11-207ENST00000511409 HOXA6P31267 233 aa0.71□□□□□ -2.3
TRAPPC11-207ENST00000511409 PHBP35232 272 aa0.71□□□□□ -2.3
TRAPPC11-207ENST00000511409 TMBIM6P55061 237 aa0.71□□□□□ -2.3
TRAPPC11-207ENST00000511409 LCN6P62502 163 aa0.71□□□□□ -2.3
TRAPPC11-207ENST00000511409 C1orf134Q5TEV5 83 aa0.71□□□□□ -2.3
TRAPPC11-207ENST00000511409 KRTAP5-10Q6L8G5 202 aa0.71□□□□□ -2.3
TRAPPC11-207ENST00000511409 Q8N6K4 173 aa0.71□□□□□ -2.3
TRAPPC11-207ENST00000511409 PLPP5Q8NEB5 264 aa0.71□□□□□ -2.3
TRAPPC11-207ENST00000511409 OR5D16Q8NGK9 328 aa0.71□□□□□ -2.3
TRAPPC11-207ENST00000511409 CDC26Q8NHZ8 85 aa0.71□□□□□ -2.3
TRAPPC11-207ENST00000511409 PPTC7Q8NI37 304 aa0.71□□□□□ -2.3
TRAPPC11-207ENST00000511409 POP5Q969H6 163 aaKnown RBP0.71□□□□□ -2.3
TRAPPC11-207ENST00000511409 CHCHD1Q96BP2 118 aaKnown RBP0.71□□□□□ -2.3
TRAPPC11-207ENST00000511409 PBDC1Q9BVG4 233 aa0.71□□□□□ -2.3
TRAPPC11-207ENST00000511409 GGACTQ9BVM4 153 aa0.71□□□□□ -2.3
TRAPPC11-207ENST00000511409 TMEM138Q9NPI0 162 aa0.71□□□□□ -2.3
TRAPPC11-207ENST00000511409 STOML2Q9UJZ1 356 aa0.71□□□□□ -2.3
TRAPPC11-207ENST00000511409 SSR3Q9UNL2 185 aa0.71□□□□□ -2.3
TRAPPC11-207ENST00000511409 MYO5AQ9Y4I1 1855 aaKnown RBP0.71□□□□□ -2.3
TRAPPC11-207ENST00000511409 IGLV3-32A0A0A0MS00 114 aa0.7□□□□□ -2.3
TRAPPC11-207ENST00000511409 RIIAD1A6NNX1 92 aa0.7□□□□□ -2.3
TRAPPC11-207ENST00000511409 APOA2P02652 100 aa0.7□□□□□ -2.3
TRAPPC11-207ENST00000511409 CXCL1P09341 107 aa0.7□□□□□ -2.3
TRAPPC11-207ENST00000511409 CXCL8P10145 99 aa0.7□□□□□ -2.3
TRAPPC11-207ENST00000511409 RAB5CP51148 216 aa0.7□□□□□ -2.3
TRAPPC11-207ENST00000511409 EFNA4P52798 201 aa0.7□□□□□ -2.3
TRAPPC11-207ENST00000511409 HAGHLQ6PII5 290 aaPredicted RBP0.7□□□□□ -2.3
TRAPPC11-207ENST00000511409 TMED4Q7Z7H5 227 aa0.7□□□□□ -2.3
TRAPPC11-207ENST00000511409 OR13C6PQ8NH95 151 aa0.7□□□□□ -2.3
TRAPPC11-207ENST00000511409 Q8TAT8 98 aa0.7□□□□□ -2.3
TRAPPC11-207ENST00000511409 TMEM70Q9BUB7 260 aa0.7□□□□□ -2.3
TRAPPC11-207ENST00000511409 LYRM2Q9NU23 88 aaPredicted RBP0.7□□□□□ -2.3
TRAPPC11-207ENST00000511409 SS18L2Q9UHA2 77 aa0.7□□□□□ -2.3
TRAPPC11-207ENST00000511409 OR52A1Q9UKL2 312 aa0.7□□□□□ -2.3
TRAPPC11-207ENST00000511409 NUP98P52948 1817 aa0.69□□□□□ -2.3
TRAPPC11-207ENST00000511409 CEP164Q9UPV0 1460 aa0.69□□□□□ -2.3
TRAPPC11-207ENST00000511409 IFNA1P01562 189 aa0.69□□□□□ -2.3
TRAPPC11-207ENST00000511409 IFNA14P01570 189 aa0.69□□□□□ -2.3
TRAPPC11-207ENST00000511409 PPP1R2P41236 205 aa0.69□□□□□ -2.3
TRAPPC11-207ENST00000511409 INSL3P51460 131 aa0.69□□□□□ -2.3
TRAPPC11-207ENST00000511409 ARPP19P56211 112 aa0.69□□□□□ -2.3
TRAPPC11-207ENST00000511409 RPL19P84098 196 aaKnown RBP0.69□□□□□ -2.3
TRAPPC11-207ENST00000511409 SBSPONQ8IVN8 264 aa0.69□□□□□ -2.3
TRAPPC11-207ENST00000511409 AP3S1Q92572 193 aa0.69□□□□□ -2.3
TRAPPC11-207ENST00000511409 IL20Q9NYY1 176 aa0.69□□□□□ -2.3
TRAPPC11-207ENST00000511409 ALPK3Q96L96 1907 aa0.69□□□□□ -2.3
TRAPPC11-207ENST00000511409 CHD3Q12873 2000 aaKnown RBP0.69□□□□□ -2.3
TRAPPC11-207ENST00000511409 A0A1W2PPM0 123 aa0.68□□□□□ -2.3
TRAPPC11-207ENST00000511409 ODAMA1E959 279 aa0.68□□□□□ -2.3
TRAPPC11-207ENST00000511409 TRGC2P03986 189 aa0.68□□□□□ -2.3
TRAPPC11-207ENST00000511409 IFNA4P05014 189 aa0.68□□□□□ -2.3
TRAPPC11-207ENST00000511409 COX7CP15954 63 aa0.68□□□□□ -2.3
TRAPPC11-207ENST00000511409 OGNP20774 298 aaKnown RBP0.68□□□□□ -2.3
TRAPPC11-207ENST00000511409 KLRD1Q13241 179 aa0.68□□□□□ -2.3
TRAPPC11-207ENST00000511409 UHRF1BP1Q6BDS2 1440 aa0.68□□□□□ -2.3
TRAPPC11-207ENST00000511409 PATE2Q6UY27 113 aa0.68□□□□□ -2.3
TRAPPC11-207ENST00000511409 LRRC18Q8N456 261 aa0.68□□□□□ -2.3
TRAPPC11-207ENST00000511409 LYSMD1Q96S90 227 aa0.68□□□□□ -2.3
TRAPPC11-207ENST00000511409 MAP1LC3BQ9GZQ8 125 aa0.68□□□□□ -2.3
TRAPPC11-207ENST00000511409 SH3BGRL3Q9H299 93 aa0.68□□□□□ -2.3
TRAPPC11-207ENST00000511409 CACYBPQ9HB71 228 aaKnown RBP0.68□□□□□ -2.3
TRAPPC11-207ENST00000511409 PLXNA4Q9HCM2 1894 aa0.68□□□□□ -2.3
TRAPPC11-207ENST00000511409 COL1A1P02452 1464 aaPredicted RBP0.67□□□□□ -2.3
TRAPPC11-207ENST00000511409 MED12Q93074 2177 aa0.67□□□□□ -2.3
TRAPPC11-207ENST00000511409 NOTCH1P46531 2555 aa0.67□□□□□ -2.3
TRAPPC11-207ENST00000511409 E5RI56 91 aa0.67□□□□□ -2.3
TRAPPC11-207ENST00000511409 K7ERJ3 54 aa0.67□□□□□ -2.3
TRAPPC11-207ENST00000511409 RER1O15258 196 aa0.67□□□□□ -2.3
TRAPPC11-207ENST00000511409 S100A5P33763 92 aa0.67□□□□□ -2.3
TRAPPC11-207ENST00000511409 VBP1P61758 197 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms