RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 C11orf68Q9H3H3 251 aaKnown RBP3.46□□□□□ -1.86
NIPBL-206ENST00000509429 ZNF581Q9P0T4 197 aa3.46□□□□□ -1.86
NIPBL-206ENST00000509429 LINC00527Q9UJ94 153 aa3.46□□□□□ -1.86
NIPBL-206ENST00000509429 SERP1Q9Y6X1 66 aa3.46□□□□□ -1.86
NIPBL-206ENST00000509429 PLXNB2O15031 1838 aa3.46□□□□□ -1.86
NIPBL-206ENST00000509429 MIA3Q5JRA6 1907 aa3.46□□□□□ -1.86
NIPBL-206ENST00000509429 DSPPQ9NZW4 1301 aa3.45□□□□□ -1.86
NIPBL-206ENST00000509429 IGKV1D-8A0A087WSZ0 117 aa3.45□□□□□ -1.86
NIPBL-206ENST00000509429 TRGV5A0A0B4J1U4 118 aa3.45□□□□□ -1.86
NIPBL-206ENST00000509429 PGPA6NDG6 321 aa3.45□□□□□ -1.86
NIPBL-206ENST00000509429 NAP1L6A6NFF2 107 aa3.45□□□□□ -1.86
NIPBL-206ENST00000509429 FAM24AA6NFZ4 105 aa3.45□□□□□ -1.86
NIPBL-206ENST00000509429 SNURFLB1AK76 121 aa3.45□□□□□ -1.86
NIPBL-206ENST00000509429 K7N7A8 449 aa3.45□□□□□ -1.86
NIPBL-206ENST00000509429 GNGT2O14610 69 aa3.45□□□□□ -1.86
NIPBL-206ENST00000509429 ZNF253O75346 499 aa3.45□□□□□ -1.86
NIPBL-206ENST00000509429 SCRG1O75711 98 aa3.45□□□□□ -1.86
NIPBL-206ENST00000509429 NXPH3O95157 252 aa3.45□□□□□ -1.86
NIPBL-206ENST00000509429 CD3DP04234 171 aa3.45□□□□□ -1.86
NIPBL-206ENST00000509429 TCRAP04437 139 aa3.45□□□□□ -1.86
NIPBL-206ENST00000509429 HLA-DRB4P13762 266 aa3.45□□□□□ -1.86
NIPBL-206ENST00000509429 VDAC1P21796 283 aa3.45□□□□□ -1.86
NIPBL-206ENST00000509429 CXCL5P42830 114 aa3.45□□□□□ -1.86
NIPBL-206ENST00000509429 ADIGQ0VDE8 80 aa3.45□□□□□ -1.86
NIPBL-206ENST00000509429 ETDBQ3ZM63 59 aa3.45□□□□□ -1.86
NIPBL-206ENST00000509429 ATP1A1-AS1Q5TC04 95 aa3.45□□□□□ -1.86
NIPBL-206ENST00000509429 SPATA12Q7Z6I5 190 aa3.45□□□□□ -1.86
NIPBL-206ENST00000509429 GTSCR1Q86UQ5 136 aa3.45□□□□□ -1.86
NIPBL-206ENST00000509429 DEFB106AQ8N104 65 aa3.45□□□□□ -1.86
NIPBL-206ENST00000509429 RPP25LQ8N5L8 163 aaKnown RBP3.45□□□□□ -1.86
NIPBL-206ENST00000509429 DRAM1Q8N682 238 aa3.45□□□□□ -1.86
NIPBL-206ENST00000509429 WFDC11Q8NEX6 87 aa3.45□□□□□ -1.86
NIPBL-206ENST00000509429 OR5H2Q8NGV7 314 aa3.45□□□□□ -1.86
NIPBL-206ENST00000509429 CMTM2Q8TAZ6 248 aa3.45□□□□□ -1.86
NIPBL-206ENST00000509429 LSM10Q969L4 123 aaKnown RBP3.45□□□□□ -1.86
NIPBL-206ENST00000509429 FXYD5Q96DB9 178 aa3.45□□□□□ -1.86
NIPBL-206ENST00000509429 C2orf50Q96LR7 162 aa3.45□□□□□ -1.86
NIPBL-206ENST00000509429 MAP6D1Q9H9H5 199 aa3.45□□□□□ -1.86
NIPBL-206ENST00000509429 CTSZQ9UBR2 303 aa3.45□□□□□ -1.86
NIPBL-206ENST00000509429 INSL5Q9Y5Q6 135 aa3.45□□□□□ -1.86
NIPBL-206ENST00000509429 HLA-DRB4X5D2U9 266 aa3.45□□□□□ -1.86
NIPBL-206ENST00000509429 MYO16Q9Y6X6 1858 aa3.45□□□□□ -1.86
NIPBL-206ENST00000509429 NUP205Q92621 2012 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 DOCK6Q96HP0 2047 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 PLXNA3P51805 1871 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 GBF1Q92538 1859 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 IGHV1OR21-1A0A087WYE8 117 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 TRAV8-3A0A0A6YYJ7 113 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 TRAV41A0A0B4J266 112 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 IRGMA1A4Y4 181 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 RBAKDNA6NC62 111 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 DPRXA6NFQ7 191 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 A8MWL6 223 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 KLLNB2CW77 178 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 C17orf112F2Z3M2 114 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 H0Y9J4 135 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 M0R378 163 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 UPK2O00526 184 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 TIMM23O14925 209 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 CREBL2O60519 120 aaPredicted RBP3.44□□□□□ -1.86
NIPBL-206ENST00000509429 NDUFB2O95178 105 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 GATA2P23769 480 aaPredicted RBP3.44□□□□□ -1.86
NIPBL-206ENST00000509429 PSMB2P49721 201 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 CCL23P55773 120 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 MPV17LQ2QL34 196 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 C9orf57Q5W0N0 161 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 FAM57BQ71RH2 274 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 SH2D6Q7Z4S9 175 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 FAM19A3Q7Z5A8 133 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 BPIFA4PQ86YQ2 179 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 MKXQ8IYA7 352 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 LINC00337Q8N6G1 96 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 MAPKAPK5-AS1Q8N8E1 139 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 TMEM75Q8N9X5 138 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 NEXN-AS1Q8NBZ9 246 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 ZNF721Q8TF20 911 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 DCANP1Q8TF63 244 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 TAF15Q92804 592 aaKnown RBP eCLIP3.44□□□□□ -1.86
NIPBL-206ENST00000509429 POLR2J2Q9GZM3 115 aaKnown RBP3.44□□□□□ -1.86
NIPBL-206ENST00000509429 CALYQ9NYX4 217 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 C19orf25Q9UFG5 118 aaPredicted RBP3.44□□□□□ -1.86
NIPBL-206ENST00000509429 PRO0461Q9UI25 63 aa3.44□□□□□ -1.86
NIPBL-206ENST00000509429 KLK5Q9Y337 293 aaPredicted RBP3.44□□□□□ -1.86
NIPBL-206ENST00000509429 TDRD15B5MCY1 1934 aaKnown RBP3.44□□□□□ -1.86
NIPBL-206ENST00000509429 SHROOM3Q8TF72 1996 aa3.43□□□□□ -1.86
NIPBL-206ENST00000509429 ALPK3Q96L96 1907 aa3.43□□□□□ -1.86
NIPBL-206ENST00000509429 TRBV7-7A0A0K0K1E9 115 aa3.43□□□□□ -1.86
NIPBL-206ENST00000509429 hDV102S1A0JD36 115 aa3.43□□□□□ -1.86
NIPBL-206ENST00000509429 RBMY1BA6NDE4 496 aaKnown RBP3.43□□□□□ -1.86
NIPBL-206ENST00000509429 RBMY1EA6NEQ0 496 aaKnown RBP3.43□□□□□ -1.86
NIPBL-206ENST00000509429 FXYD1O00168 92 aa3.43□□□□□ -1.86
NIPBL-206ENST00000509429 UBE2L6O14933 153 aa3.43□□□□□ -1.86
NIPBL-206ENST00000509429 NDUFB3O43676 98 aa3.43□□□□□ -1.86
NIPBL-206ENST00000509429 SYNGR2O43760 224 aa3.43□□□□□ -1.86
NIPBL-206ENST00000509429 SSSCA1O60232 199 aa3.43□□□□□ -1.86
NIPBL-206ENST00000509429 CST7O76096 145 aa3.43□□□□□ -1.86
NIPBL-206ENST00000509429 GYPBP06028 91 aa3.43□□□□□ -1.86
NIPBL-206ENST00000509429 RBMY1DP0C7P1 496 aaKnown RBP3.43□□□□□ -1.86
NIPBL-206ENST00000509429 RBMY1A1P0DJD3 496 aaKnown RBP3.43□□□□□ -1.86
NIPBL-206ENST00000509429 COX6A1P12074 109 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms