RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 CXCL16Q9H2A7 254 aa1.91□□□□□ -2.1
DHFR-204ENST00000508282 CST9LQ9H4G1 147 aa1.91□□□□□ -2.1
DHFR-204ENST00000508282 NUMA1Q14980 2115 aa1.91□□□□□ -2.1
DHFR-204ENST00000508282 SMARCA4P51532 1647 aa1.91□□□□□ -2.1
DHFR-204ENST00000508282 RTEL1-TNFRSF6BF6WH68 1400 aa1.91□□□□□ -2.1
DHFR-204ENST00000508282 TRAV3A0A0B4J244 114 aa1.9□□□□□ -2.11
DHFR-204ENST00000508282 TRAV1-1A0A0B4J248 108 aa1.9□□□□□ -2.11
DHFR-204ENST00000508282 TMEM189A5PLL7 270 aa1.9□□□□□ -2.11
DHFR-204ENST00000508282 M0QZK8 103 aa1.9□□□□□ -2.11
DHFR-204ENST00000508282 PROSCO94903 275 aa1.9□□□□□ -2.11
DHFR-204ENST00000508282 BAALC-AS2P0C853 105 aa1.9□□□□□ -2.11
DHFR-204ENST00000508282 PSG9Q00887 426 aa1.9□□□□□ -2.11
DHFR-204ENST00000508282 HES1Q14469 280 aa1.9□□□□□ -2.11
DHFR-204ENST00000508282 ZNF181Q2M3W8 571 aa1.9□□□□□ -2.11
DHFR-204ENST00000508282 VMA21Q3ZAQ7 101 aa1.9□□□□□ -2.11
DHFR-204ENST00000508282 C7orf65Q6ZTY9 151 aa1.9□□□□□ -2.11
DHFR-204ENST00000508282 PHF5AQ7RTV0 110 aaKnown RBP1.9□□□□□ -2.11
DHFR-204ENST00000508282 LINC00301Q8NCQ3 95 aa1.9□□□□□ -2.11
DHFR-204ENST00000508282 OR4K15Q8NH41 348 aa1.9□□□□□ -2.11
DHFR-204ENST00000508282 SLC50A1Q9BRV3 221 aa1.9□□□□□ -2.11
DHFR-204ENST00000508282 CACYBPQ9HB71 228 aaKnown RBP1.9□□□□□ -2.11
DHFR-204ENST00000508282 COL4A2P08572 1712 aa1.9□□□□□ -2.11
DHFR-204ENST00000508282 MYO5AQ9Y4I1 1855 aaKnown RBP1.9□□□□□ -2.11
DHFR-204ENST00000508282 STRCQ7RTU9 1775 aa1.9□□□□□ -2.11
DHFR-204ENST00000508282 FER1L6Q2WGJ9 1857 aa1.89□□□□□ -2.11
DHFR-204ENST00000508282 MEIKINA0A087WXM9 373 aa1.89□□□□□ -2.11
DHFR-204ENST00000508282 IGHV1-58A0A0C4DH39 117 aa1.89□□□□□ -2.11
DHFR-204ENST00000508282 H3BRN7 92 aa1.89□□□□□ -2.11
DHFR-204ENST00000508282 RER1O15258 196 aa1.89□□□□□ -2.11
DHFR-204ENST00000508282 UBBP0CG47 229 aa1.89□□□□□ -2.11
DHFR-204ENST00000508282 CMPK1P30085 196 aa1.89□□□□□ -2.11
DHFR-204ENST00000508282 CKS1BP61024 79 aa1.89□□□□□ -2.11
DHFR-204ENST00000508282 C4orf22Q6V702 233 aa1.89□□□□□ -2.11
DHFR-204ENST00000508282 LINC00305Q7Z4B0 112 aa1.89□□□□□ -2.11
DHFR-204ENST00000508282 ZNF418Q8TF45 676 aaPredicted RBP1.89□□□□□ -2.11
DHFR-204ENST00000508282 TCEAL4Q96EI5 215 aa1.89□□□□□ -2.11
DHFR-204ENST00000508282 C14orf132Q9NPU4 83 aa1.89□□□□□ -2.11
DHFR-204ENST00000508282 LHFPL6Q9Y693 200 aa1.89□□□□□ -2.11
DHFR-204ENST00000508282 OVOS2A0A0G2JMS6 1433 aa1.89□□□□□ -2.11
DHFR-204ENST00000508282 ANAPC1Q9H1A4 1944 aa1.89□□□□□ -2.11
DHFR-204ENST00000508282 GLI3P10071 1580 aa1.89□□□□□ -2.11
DHFR-204ENST00000508282 TRPM1Q7Z4N2 1603 aa1.88□□□□□ -2.11
DHFR-204ENST00000508282 J3QRE1 110 aa1.88□□□□□ -2.11
DHFR-204ENST00000508282 DPM2O94777 84 aa1.88□□□□□ -2.11
DHFR-204ENST00000508282 C1QCP02747 245 aa1.88□□□□□ -2.11
DHFR-204ENST00000508282 MT-ND6P03923 174 aa1.88□□□□□ -2.11
DHFR-204ENST00000508282 GPX2P18283 190 aa1.88□□□□□ -2.11
DHFR-204ENST00000508282 SRP9P49458 86 aaKnown RBP1.88□□□□□ -2.11
DHFR-204ENST00000508282 KLRD1Q13241 179 aa1.88□□□□□ -2.11
DHFR-204ENST00000508282 ELOBQ15370 118 aa1.88□□□□□ -2.11
DHFR-204ENST00000508282 TPRXLQ17RH7 258 aa1.88□□□□□ -2.11
DHFR-204ENST00000508282 RNASE10Q5GAN6 216 aaKnown RBP1.88□□□□□ -2.11
DHFR-204ENST00000508282 PATE2Q6UY27 113 aa1.88□□□□□ -2.11
DHFR-204ENST00000508282 ZC2HC1AQ96GY0 325 aa1.88□□□□□ -2.11
DHFR-204ENST00000508282 TXNDC17Q9BRA2 123 aa1.88□□□□□ -2.11
DHFR-204ENST00000508282 LY96Q9Y6Y9 160 aa1.88□□□□□ -2.11
DHFR-204ENST00000508282 ZFHX2Q9C0A1 2572 aaPredicted RBP1.88□□□□□ -2.11
DHFR-204ENST00000508282 A2MP01023 1474 aa1.88□□□□□ -2.11
DHFR-204ENST00000508282 CPDO75976 1380 aa1.87□□□□□ -2.11
DHFR-204ENST00000508282 TRBV7-6A0A0J9YX20 115 aa1.87□□□□□ -2.11
DHFR-204ENST00000508282 LOC107984640A0A0U1RRK4 108 aa1.87□□□□□ -2.11
DHFR-204ENST00000508282 ZNF737O75373 536 aa1.87□□□□□ -2.11
DHFR-204ENST00000508282 ASAH2BP0C7U1 165 aa1.87□□□□□ -2.11
DHFR-204ENST00000508282 P0DMU3 169 aa1.87□□□□□ -2.11
DHFR-204ENST00000508282 FAM231AP0DMU4 169 aa1.87□□□□□ -2.11
DHFR-204ENST00000508282 FAM231CP0DMU5 169 aa1.87□□□□□ -2.11
DHFR-204ENST00000508282 MIFP14174 115 aa1.87□□□□□ -2.11
DHFR-204ENST00000508282 SDC4P31431 198 aa1.87□□□□□ -2.11
DHFR-204ENST00000508282 AKR1C3P42330 323 aa1.87□□□□□ -2.11
DHFR-204ENST00000508282 PSPHP78330 225 aa1.87□□□□□ -2.11
DHFR-204ENST00000508282 SMIM21Q3B7S5 101 aa1.87□□□□□ -2.11
DHFR-204ENST00000508282 CHCHD1Q96BP2 118 aaKnown RBP1.87□□□□□ -2.11
DHFR-204ENST00000508282 MCEEQ96PE7 176 aa1.87□□□□□ -2.11
DHFR-204ENST00000508282 RETNLBQ9BQ08 111 aa1.87□□□□□ -2.11
DHFR-204ENST00000508282 TTTY12Q9BZ98 90 aa1.87□□□□□ -2.11
DHFR-204ENST00000508282 PXDNLA1KZ92 1463 aa1.87□□□□□ -2.11
DHFR-204ENST00000508282 RTL9Q8NET4 1388 aa1.86□□□□□ -2.11
DHFR-204ENST00000508282 TRAV13-1A0A0B4J241 112 aa1.86□□□□□ -2.11
DHFR-204ENST00000508282 C9JAW5 83 aa1.86□□□□□ -2.11
DHFR-204ENST00000508282 C17orf112F2Z3M2 114 aa1.86□□□□□ -2.11
DHFR-204ENST00000508282 OR1I1O60431 355 aa1.86□□□□□ -2.11
DHFR-204ENST00000508282 TNFSF15O95150 251 aa1.86□□□□□ -2.11
DHFR-204ENST00000508282 UBL3O95164 117 aa1.86□□□□□ -2.11
DHFR-204ENST00000508282 OR2H2O95918 312 aa1.86□□□□□ -2.11
DHFR-204ENST00000508282 SCTP09683 121 aa1.86□□□□□ -2.11
DHFR-204ENST00000508282 SSR2P43308 183 aa1.86□□□□□ -2.11
DHFR-204ENST00000508282 ZNF846Q147U1 533 aa1.86□□□□□ -2.11
DHFR-204ENST00000508282 DEFB115Q30KQ5 88 aa1.86□□□□□ -2.11
DHFR-204ENST00000508282 CCDC58Q4VC31 144 aa1.86□□□□□ -2.11
DHFR-204ENST00000508282 Q8IYB0 196 aa1.86□□□□□ -2.11
DHFR-204ENST00000508282 TCTE3Q8IZS6 198 aa1.86□□□□□ -2.11
DHFR-204ENST00000508282 TEX29Q8N6K0 151 aa1.86□□□□□ -2.11
DHFR-204ENST00000508282 C9orf163Q8N9P6 203 aa1.86□□□□□ -2.11
DHFR-204ENST00000508282 OR4B1Q8NGF8 309 aa1.86□□□□□ -2.11
DHFR-204ENST00000508282 OR51A4Q8NGJ6 313 aa1.86□□□□□ -2.11
DHFR-204ENST00000508282 OR5H6Q8NGV6 325 aa1.86□□□□□ -2.11
DHFR-204ENST00000508282 OR2T35Q8NGX2 323 aa1.86□□□□□ -2.11
DHFR-204ENST00000508282 COPZ2Q9P299 210 aa1.86□□□□□ -2.11
DHFR-204ENST00000508282 HSPB8Q9UJY1 196 aa1.86□□□□□ -2.11
DHFR-204ENST00000508282 HIGD1AQ9Y241 93 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 196.7 ms