RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 TOMM20LQ6UXN7 152 aa0.65□□□□□ -2.31
SMN2-208ENST00000508258 TAC4Q86UU9 113 aa0.65□□□□□ -2.31
SMN2-208ENST00000508258 ST6GALNAC3Q8NDV1 305 aa0.65□□□□□ -2.31
SMN2-208ENST00000508258 PPTC7Q8NI37 304 aa0.65□□□□□ -2.31
SMN2-208ENST00000508258 DYDC1Q8WWB3 177 aa0.65□□□□□ -2.31
SMN2-208ENST00000508258 RMND5BQ96G75 393 aaPredicted RBP0.65□□□□□ -2.31
SMN2-208ENST00000508258 RETNLBQ9BQ08 111 aa0.65□□□□□ -2.31
SMN2-208ENST00000508258 C6orf62Q9GZU0 229 aaPredicted RBP0.65□□□□□ -2.31
SMN2-208ENST00000508258 MRPL40Q9NQ50 206 aaKnown RBP0.65□□□□□ -2.31
SMN2-208ENST00000508258 OTORQ9NRC9 128 aa0.65□□□□□ -2.31
SMN2-208ENST00000508258 MED11Q9P086 117 aa0.65□□□□□ -2.31
SMN2-208ENST00000508258 CRCT1Q9UGL9 99 aa0.65□□□□□ -2.31
SMN2-208ENST00000508258 LAMTOR3Q9UHA4 124 aa0.65□□□□□ -2.31
SMN2-208ENST00000508258 NDUFAF1Q9Y375 327 aa0.65□□□□□ -2.31
SMN2-208ENST00000508258 RNF11Q9Y3C5 154 aa0.65□□□□□ -2.31
SMN2-208ENST00000508258 NUBP2Q9Y5Y2 271 aa0.65□□□□□ -2.31
SMN2-208ENST00000508258 ANKRD30AQ9BXX3 1397 aa0.65□□□□□ -2.31
SMN2-208ENST00000508258 ADGRB2O60241 1585 aa0.65□□□□□ -2.31
SMN2-208ENST00000508258 N4BP2Q86UW6 1770 aaPredicted RBP0.65□□□□□ -2.31
SMN2-208ENST00000508258 DOCK4Q8N1I0 1966 aa0.65□□□□□ -2.31
SMN2-208ENST00000508258 TNS3Q68CZ2 1445 aa0.64□□□□□ -2.31
SMN2-208ENST00000508258 TRAPPC8Q9Y2L5 1435 aa0.64□□□□□ -2.31
SMN2-208ENST00000508258 BRWD1Q9NSI6 2320 aa0.64□□□□□ -2.31
SMN2-208ENST00000508258 A0A087WSZ3 146 aa0.64□□□□□ -2.31
SMN2-208ENST00000508258 IGKV2D-26A0A0A0MRZ7 120 aa0.64□□□□□ -2.31
SMN2-208ENST00000508258 IGKV3D-7A0A0C4DH55 119 aa0.64□□□□□ -2.31
SMN2-208ENST00000508258 IGKV3OR2-268A0A0C4DH90 116 aa0.64□□□□□ -2.31
SMN2-208ENST00000508258 E7EQ34 232 aa0.64□□□□□ -2.31
SMN2-208ENST00000508258 K7ERJ3 54 aa0.64□□□□□ -2.31
SMN2-208ENST00000508258 HIST1H2BKO60814 126 aa0.64□□□□□ -2.31
SMN2-208ENST00000508258 HYPMO75409 117 aa0.64□□□□□ -2.31
SMN2-208ENST00000508258 CST7O76096 145 aa0.64□□□□□ -2.31
SMN2-208ENST00000508258 HIST1H2BJP06899 126 aa0.64□□□□□ -2.31
SMN2-208ENST00000508258 BCL2P10415 239 aa0.64□□□□□ -2.31
SMN2-208ENST00000508258 DSCR4P56555 118 aaPredicted RBP0.64□□□□□ -2.31
SMN2-208ENST00000508258 CNBPP62633 177 aaKnown RBP0.64□□□□□ -2.31
SMN2-208ENST00000508258 HBBP68871 147 aa0.64□□□□□ -2.31
SMN2-208ENST00000508258 KRTAP26-1Q6PEX3 210 aa0.64□□□□□ -2.31
SMN2-208ENST00000508258 ANGPTL5Q86XS5 388 aa0.64□□□□□ -2.31
SMN2-208ENST00000508258 IFT20Q8IY31 132 aa0.64□□□□□ -2.31
SMN2-208ENST00000508258 DEFB119Q8N690 84 aa0.64□□□□□ -2.31
SMN2-208ENST00000508258 Q8N814 137 aa0.64□□□□□ -2.31
SMN2-208ENST00000508258 OR5D16Q8NGK9 328 aa0.64□□□□□ -2.31
SMN2-208ENST00000508258 TMEM254Q8TBM7 123 aa0.64□□□□□ -2.31
SMN2-208ENST00000508258 THEM6Q8WUY1 208 aa0.64□□□□□ -2.31
SMN2-208ENST00000508258 PATE1Q8WXA2 126 aa0.64□□□□□ -2.31
SMN2-208ENST00000508258 POP5Q969H6 163 aaKnown RBP0.64□□□□□ -2.31
SMN2-208ENST00000508258 ISOC1Q96CN7 298 aa0.64□□□□□ -2.31
SMN2-208ENST00000508258 BORCS8Q96FH0 119 aa0.64□□□□□ -2.31
SMN2-208ENST00000508258 ZC2HC1AQ96GY0 325 aa0.64□□□□□ -2.31
SMN2-208ENST00000508258 OR2H1Q9GZK4 316 aa0.64□□□□□ -2.31
SMN2-208ENST00000508258 CACYBPQ9HB71 228 aaKnown RBP0.64□□□□□ -2.31
SMN2-208ENST00000508258 LRTM1Q9HBL6 345 aa0.64□□□□□ -2.31
SMN2-208ENST00000508258 LY96Q9Y6Y9 160 aa0.64□□□□□ -2.31
SMN2-208ENST00000508258 RTL9Q8NET4 1388 aa0.64□□□□□ -2.31
SMN2-208ENST00000508258 ARAP1Q96P48 1450 aa0.64□□□□□ -2.31
SMN2-208ENST00000508258 DOCK10Q96BY6 2186 aa0.63□□□□□ -2.31
SMN2-208ENST00000508258 LOC110117498A0A087WWA1 95 aa0.63□□□□□ -2.31
SMN2-208ENST00000508258 TRBV6-8A0A0A6YYG3 113 aa0.63□□□□□ -2.31
SMN2-208ENST00000508258 TCRBV4S1A1TA0A5B7 111 aa0.63□□□□□ -2.31
SMN2-208ENST00000508258 ZNF736B4DX44 427 aaPredicted RBP0.63□□□□□ -2.31
SMN2-208ENST00000508258 E7EUB6 86 aa0.63□□□□□ -2.31
SMN2-208ENST00000508258 C17orf112F2Z3M2 114 aa0.63□□□□□ -2.31
SMN2-208ENST00000508258 H3BQV1 296 aa0.63□□□□□ -2.31
SMN2-208ENST00000508258 GABARAPH6UMI1 98 aa0.63□□□□□ -2.31
SMN2-208ENST00000508258 PFDN1O60925 122 aa0.63□□□□□ -2.31
SMN2-208ENST00000508258 IFNA4P05014 189 aa0.63□□□□□ -2.31
SMN2-208ENST00000508258 OR10J4P0C629 311 aa0.63□□□□□ -2.31
SMN2-208ENST00000508258 RPL35P42766 123 aaKnown RBP0.63□□□□□ -2.31
SMN2-208ENST00000508258 RAB5CP51148 216 aa0.63□□□□□ -2.31
SMN2-208ENST00000508258 POLR2HP52434 150 aaKnown RBP0.63□□□□□ -2.31
SMN2-208ENST00000508258 KLRD1Q13241 179 aa0.63□□□□□ -2.31
SMN2-208ENST00000508258 EIF3IQ13347 325 aaKnown RBP0.63□□□□□ -2.31
SMN2-208ENST00000508258 SURF2Q15527 256 aaPredicted RBP0.63□□□□□ -2.31
SMN2-208ENST00000508258 TMEM128Q5BJH2 165 aa0.63□□□□□ -2.31
SMN2-208ENST00000508258 C1orf134Q5TEV5 83 aa0.63□□□□□ -2.31
SMN2-208ENST00000508258 SAMD13Q5VXD3 122 aa0.63□□□□□ -2.31
SMN2-208ENST00000508258 C4orf22Q6V702 233 aa0.63□□□□□ -2.31
SMN2-208ENST00000508258 ZNF833PQ6ZTB9 187 aa0.63□□□□□ -2.31
SMN2-208ENST00000508258 AKAP14Q86UN6 197 aa0.63□□□□□ -2.31
SMN2-208ENST00000508258 OR5D14Q8NGL3 314 aa0.63□□□□□ -2.31
SMN2-208ENST00000508258 OR2T35Q8NGX2 323 aa0.63□□□□□ -2.31
SMN2-208ENST00000508258 C4orf3Q8WVX3 66 aa0.63□□□□□ -2.31
SMN2-208ENST00000508258 CHCHD1Q96BP2 118 aaKnown RBP0.63□□□□□ -2.31
SMN2-208ENST00000508258 ZNF714Q96N38 554 aa0.63□□□□□ -2.31
SMN2-208ENST00000508258 EFCAB11Q9BUY7 163 aa0.63□□□□□ -2.31
SMN2-208ENST00000508258 CCDC32Q9BV29 185 aa0.63□□□□□ -2.31
SMN2-208ENST00000508258 TAF9BQ9HBM6 251 aa0.63□□□□□ -2.31
SMN2-208ENST00000508258 RASL12Q9NYN1 266 aa0.63□□□□□ -2.31
SMN2-208ENST00000508258 NAT8BQ9UHF3 227 aa0.63□□□□□ -2.31
SMN2-208ENST00000508258 LAMTOR2Q9Y2Q5 125 aa0.63□□□□□ -2.31
SMN2-208ENST00000508258 MED31Q9Y3C7 131 aa0.63□□□□□ -2.31
SMN2-208ENST00000508258 TNRC6BQ9UPQ9 1833 aaKnown RBP0.63□□□□□ -2.31
SMN2-208ENST00000508258 BCL9O00512 1426 aa0.63□□□□□ -2.31
SMN2-208ENST00000508258 KDM6AO15550 1401 aaPredicted RBP0.63□□□□□ -2.31
SMN2-208ENST00000508258 ANKRD31Q8N7Z5 1873 aa0.63□□□□□ -2.31
SMN2-208ENST00000508258 TCOF1Q13428 1488 aaKnown RBP0.62□□□□□ -2.31
SMN2-208ENST00000508258 RFX7Q2KHR2 1363 aa0.62□□□□□ -2.31
SMN2-208ENST00000508258 IGKV3-7A0A075B6H7 116 aa0.62□□□□□ -2.31
SMN2-208ENST00000508258 A0A087WX48 190 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms