RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 FAM90A10PA6NDY2 464 aa8.61□□□□□ -1.03
PDLIM5-210ENST00000508216 FAM90A20PA6NIJ5 464 aa8.61□□□□□ -1.03
PDLIM5-210ENST00000508216 FAM90A7PA6NKC0 464 aa8.61□□□□□ -1.03
PDLIM5-210ENST00000508216 FAM90A22PA8MWA6 464 aa8.61□□□□□ -1.03
PDLIM5-210ENST00000508216 FAM90A12PA8MX19 464 aa8.61□□□□□ -1.03
PDLIM5-210ENST00000508216 H0YIG0 161 aa8.61□□□□□ -1.03
PDLIM5-210ENST00000508216 ATOX1O00244 68 aa8.61□□□□□ -1.03
PDLIM5-210ENST00000508216 CT62P0C5K7 136 aa8.61□□□□□ -1.03
PDLIM5-210ENST00000508216 TMEM170BQ5T4T1 132 aa8.61□□□□□ -1.03
PDLIM5-210ENST00000508216 ZC2HC1BQ5TFG8 222 aa8.61□□□□□ -1.03
PDLIM5-210ENST00000508216 FKBP1CQ5VVH2 108 aa8.61□□□□□ -1.03
PDLIM5-210ENST00000508216 SLC25A45Q8N413 288 aa8.61□□□□□ -1.03
PDLIM5-210ENST00000508216 RAB42Q8N4Z0 105 aa8.61□□□□□ -1.03
PDLIM5-210ENST00000508216 AGPAT4-IT1Q9H0P7 198 aa8.61□□□□□ -1.03
PDLIM5-210ENST00000508216 C7orf69Q9H7B7 122 aa8.61□□□□□ -1.03
PDLIM5-210ENST00000508216 TMEM89A2RUT3 159 aa8.6□□□□□ -1.03
PDLIM5-210ENST00000508216 TMEM178BH3BS89 294 aa8.6□□□□□ -1.03
PDLIM5-210ENST00000508216 ENSAO43768 121 aaKnown RBP8.6□□□□□ -1.03
PDLIM5-210ENST00000508216 IGKV1-5P01602 117 aa8.6□□□□□ -1.03
PDLIM5-210ENST00000508216 HBDP02042 147 aa8.6□□□□□ -1.03
PDLIM5-210ENST00000508216 PAX8Q06710 450 aa8.6□□□□□ -1.03
PDLIM5-210ENST00000508216 FAM90A1Q86YD7 464 aa8.6□□□□□ -1.03
PDLIM5-210ENST00000508216 EXOC3-AS1Q8N2X6 119 aa8.6□□□□□ -1.03
PDLIM5-210ENST00000508216 C6orf106Q9H6K1 298 aaPredicted RBP8.6□□□□□ -1.03
PDLIM5-210ENST00000508216 CACNA1CQ13936 2221 aa8.59□□□□□ -1.03
PDLIM5-210ENST00000508216 ADAMTS9Q9P2N4 1935 aa8.59□□□□□ -1.03
PDLIM5-210ENST00000508216 TRAV13-1A0A0B4J241 112 aa8.59□□□□□ -1.03
PDLIM5-210ENST00000508216 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-210ENST00000508216 ZNF785A8K8V0 405 aa8.59□□□□□ -1.03
PDLIM5-210ENST00000508216 FOXS1O43638 330 aa8.59□□□□□ -1.03
PDLIM5-210ENST00000508216 NXPH3O95157 252 aa8.59□□□□□ -1.03
PDLIM5-210ENST00000508216 TCL1BO95988 128 aa8.59□□□□□ -1.03
PDLIM5-210ENST00000508216 IGKV1-39P01597 117 aa8.59□□□□□ -1.03
PDLIM5-210ENST00000508216 APOHP02749 345 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-210ENST00000508216 IGKV1D-39P04432 117 aa8.59□□□□□ -1.03
PDLIM5-210ENST00000508216 CRYGSP22914 178 aa8.59□□□□□ -1.03
PDLIM5-210ENST00000508216 EFNA4P52798 201 aa8.59□□□□□ -1.03
PDLIM5-210ENST00000508216 TMEM200BQ69YZ2 307 aa8.59□□□□□ -1.03
PDLIM5-210ENST00000508216 FAM214BQ7L5A3 538 aa8.59□□□□□ -1.03
PDLIM5-210ENST00000508216 FAM168AQ92567 244 aa8.59□□□□□ -1.03
PDLIM5-210ENST00000508216 ZNF492Q9P255 531 aa8.59□□□□□ -1.03
PDLIM5-210ENST00000508216 TAC3Q9UHF0 121 aa8.59□□□□□ -1.03
PDLIM5-210ENST00000508216 PKIGQ9Y2B9 76 aa8.59□□□□□ -1.03
PDLIM5-210ENST00000508216 MPDZO75970 2070 aa8.59□□□□□ -1.03
PDLIM5-210ENST00000508216 TRGV11A0A075B6L2 103 aa8.58□□□□□ -1.04
PDLIM5-210ENST00000508216 IGKV2D-26A0A0A0MRZ7 120 aa8.58□□□□□ -1.04
PDLIM5-210ENST00000508216 FAM236DA0A1B0GTK5 79 aa8.58□□□□□ -1.04
PDLIM5-210ENST00000508216 NPIPB11E5RHQ5 1161 aa8.58□□□□□ -1.04
PDLIM5-210ENST00000508216 P0C879 139 aa8.58□□□□□ -1.04
PDLIM5-210ENST00000508216 FAM236CP0DP71 79 aa8.58□□□□□ -1.04
PDLIM5-210ENST00000508216 WT1P19544 449 aaPredicted RBP8.58□□□□□ -1.04
PDLIM5-210ENST00000508216 CA6P23280 308 aa8.58□□□□□ -1.04
PDLIM5-210ENST00000508216 ZNF503Q96F45 646 aa8.58□□□□□ -1.04
PDLIM5-210ENST00000508216 FAM19A4Q96LR4 140 aa8.58□□□□□ -1.04
PDLIM5-210ENST00000508216 PRSS22Q9GZN4 317 aa8.58□□□□□ -1.04
PDLIM5-210ENST00000508216 OCIAD1Q9NX40 245 aa8.58□□□□□ -1.04
PDLIM5-210ENST00000508216 LINC01546A6NGU7 62 aa8.58□□□□□ -1.04
PDLIM5-210ENST00000508216 CDX4O14627 284 aaPredicted RBP8.58□□□□□ -1.04
PDLIM5-210ENST00000508216 PLAUP00749 431 aa8.58□□□□□ -1.04
PDLIM5-210ENST00000508216 DRAM1Q8N682 238 aa8.58□□□□□ -1.04
PDLIM5-210ENST00000508216 KLHDC9Q8NEP7 349 aa8.58□□□□□ -1.04
PDLIM5-210ENST00000508216 HIST1H4GQ99525 98 aa8.58□□□□□ -1.04
PDLIM5-210ENST00000508216 PRRG4Q9BZD6 226 aa8.58□□□□□ -1.04
PDLIM5-210ENST00000508216 ZNF355PQ9NSJ1 428 aa8.58□□□□□ -1.04
PDLIM5-210ENST00000508216 GOLGA4Q13439 2230 aaKnown RBP8.57□□□□□ -1.04
PDLIM5-210ENST00000508216 LINC01548A6NM66 108 aa8.57□□□□□ -1.04
PDLIM5-210ENST00000508216 C4orf51C9J302 202 aa8.57□□□□□ -1.04
PDLIM5-210ENST00000508216 K7ESM1 405 aa8.57□□□□□ -1.04
PDLIM5-210ENST00000508216 NXPH1P58417 271 aa8.57□□□□□ -1.04
PDLIM5-210ENST00000508216 PCSK4Q6UW60 755 aa8.57□□□□□ -1.04
PDLIM5-210ENST00000508216 SDIM1Q6ZPB5 146 aa8.57□□□□□ -1.04
PDLIM5-210ENST00000508216 C5orf38Q86SI9 138 aa8.57□□□□□ -1.04
PDLIM5-210ENST00000508216 OR8A1Q8NGG7 326 aa8.57□□□□□ -1.04
PDLIM5-210ENST00000508216 COL4A5P29400 1685 aa8.57□□□□□ -1.04
PDLIM5-210ENST00000508216 IGKV1D-13A0A0B4J2D9 117 aa8.56□□□□□ -1.04
PDLIM5-210ENST00000508216 WI2-2373I1.2A0A1W2PRP0 233 aa8.56□□□□□ -1.04
PDLIM5-210ENST00000508216 SRRM4A7MD48 611 aaKnown RBP8.56□□□□□ -1.04
PDLIM5-210ENST00000508216 ZFAND5O76080 213 aa8.56□□□□□ -1.04
PDLIM5-210ENST00000508216 NDUFC2O95298 119 aa8.56□□□□□ -1.04
PDLIM5-210ENST00000508216 IGKV1-13P0DP09 117 aa8.56□□□□□ -1.04
PDLIM5-210ENST00000508216 COX6A1P12074 109 aa8.56□□□□□ -1.04
PDLIM5-210ENST00000508216 Q6ZPA2 131 aa8.56□□□□□ -1.04
PDLIM5-210ENST00000508216 MBD3L2Q8NHZ7 208 aaPredicted RBP8.56□□□□□ -1.04
PDLIM5-210ENST00000508216 CCL28Q9NRJ3 127 aa8.56□□□□□ -1.04
PDLIM5-210ENST00000508216 TIMM13Q9Y5L4 95 aaPredicted RBP8.56□□□□□ -1.04
PDLIM5-210ENST00000508216 SSR4P51571 173 aa8.56□□□□□ -1.04
PDLIM5-210ENST00000508216 CD164Q04900 197 aa8.56□□□□□ -1.04
PDLIM5-210ENST00000508216 LSM4Q9Y4Z0 139 aaKnown RBP8.56□□□□□ -1.04
PDLIM5-210ENST00000508216 TRAV12-2A0A075B6T6 113 aa8.55□□□□□ -1.04
PDLIM5-210ENST00000508216 TRBV6-6A0A0A6YYG2 114 aa8.55□□□□□ -1.04
PDLIM5-210ENST00000508216 DEFA4P12838 97 aa8.55□□□□□ -1.04
PDLIM5-210ENST00000508216 TWIST1Q15672 202 aa8.55□□□□□ -1.04
PDLIM5-210ENST00000508216 LINC00643Q86TS7 51 aa8.55□□□□□ -1.04
PDLIM5-210ENST00000508216 NT5CQ8TCD5 201 aa8.55□□□□□ -1.04
PDLIM5-210ENST00000508216 BMFQ96LC9 184 aa8.55□□□□□ -1.04
PDLIM5-210ENST00000508216 MGST2Q99735 147 aa8.55□□□□□ -1.04
PDLIM5-210ENST00000508216 UPK3BQ9BT76 320 aa8.55□□□□□ -1.04
PDLIM5-210ENST00000508216 RPP21Q9H633 154 aaKnown RBP8.55□□□□□ -1.04
PDLIM5-210ENST00000508216 ZNF256Q9Y2P7 627 aaPredicted RBP8.55□□□□□ -1.04
PDLIM5-210ENST00000508216 U3KQK5 164 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms