RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 MMP26Q9NRE1 261 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 TMEM14BQ9NUH8 114 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 UQCC1Q9NVA1 299 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 DCAF16Q9NXF7 216 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 OR5AC2Q9NZP5 309 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 PITPNC1Q9UKF7 332 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 RCL1Q9Y2P8 373 aaKnown RBP1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 TIMM9Q9Y5J7 89 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 OR51B2Q9Y5P1 312 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 AHCTF1Q8WYP5 2266 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 KALRNO60229 2985 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 CENPEQ02224 2701 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 TRAV1-1A0A0B4J248 108 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 IGHV1-3A0A0C4DH29 117 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 IGHV2-70DA0A0C4DH43 119 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 TEX50A0A1B0GTY4 177 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 A0A1B0GWB2 263 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 A0A1W2PPE3 182 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 A0A1W2PPV4 95 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 IGSF23A1L1A6 192 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 FAM24AA6NFZ4 105 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 LYNX1G3V0Z9 82 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 H0YJW9 148 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 LY6LH3BQJ8 138 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 C19orf84I3L1E1 186 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 M0QZK8 103 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 SLC31A2O15432 143 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 NBR2O15453 112 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 FGF16O43320 207 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 MMP23AO75900 390 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 CST7O76096 145 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 CNIH1O95406 144 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 MOSP00540 346 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 CFDP00746 253 aaPredicted RBP1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 IFNA1P01562 189 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 IGKV1-39P01597 117 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 IGHV3-7P01780 117 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 IGKV1-16P04430 117 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 IGKV1D-39P04432 117 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 MSMBP08118 114 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 NMBP08949 121 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 METTL15P1P0C7V9 234 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 LYNX1P0DP58 116 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 IAPPP10997 89 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 COX7A1P24310 79 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 NPY1RP25929 384 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 GPX4P36969 197 aaPredicted RBP1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 SULT1A2P50226 295 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 DYNLT3P51808 116 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 ARF6P62330 175 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 SELENOTP62341 195 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 LCN2P80188 198 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 PRCDQ00LT1 54 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 SLC38A11Q08AI6 406 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 ZNF616Q08AN1 781 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 TMEM267Q0VDI3 215 aaPredicted RBP1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 PJVKQ0ZLH3 352 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 DAZ2Q13117 558 aaKnown RBP1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 CLINT1Q14677 625 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 PLGLAQ15195 96 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 SSX2Q16385 188 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 PRSS8Q16651 343 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 CLEC12BQ2HXU8 276 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 LRRC75BQ2VPJ9 315 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 TPTE2P1Q5T6R2 138 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 RPL7L1Q6DKI1 246 aaKnown RBP1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 DUX4L9Q6RFH8 374 aaPredicted RBP1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 TMEM14EPQ6UXP3 125 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 SSX9Q7RTT3 188 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 TCF23Q7RTU1 214 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 VMO1Q7Z5L0 202 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 COMMD7Q86VX2 200 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 SLC7A5P1Q8MH63 180 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 PNKDQ8N490 385 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 HSD17B11Q8NBQ5 300 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 STXBP6Q8NFX7 210 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 NPBQ8NG41 125 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 OR4P4Q8NGL7 312 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 CLDND2Q8NHS1 167 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 C10orf105Q8TEF2 133 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 RNF2Q99496 336 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 HINT2Q9BX68 163 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 MRPL20Q9BYC9 149 aaKnown RBP1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 KRTAP4-1Q9BYQ7 146 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 ACTR3CQ9C0K3 210 aaPredicted RBP1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 BPESC1Q9GZL8 116 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 WDR61Q9GZS3 305 aaKnown RBP1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 C11orf1Q9H5F2 150 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 DAZ3Q9NR90 486 aaKnown RBP1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 CYTL1Q9NRR1 136 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 NDUFA4L2Q9NRX3 87 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 SIGLEC8Q9NYZ4 499 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 PRELID1Q9Y255 219 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 SIGLEC9Q9Y336 463 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 MPDZO75970 2070 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 SETD2Q9BYW2 2564 aaPredicted RBP1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 MED13Q9UHV7 2174 aa1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 PHF3Q92576 2039 aaKnown RBP1.69□□□□□ -2.14
TOPBP1-205ENST00000506779 TENM4Q6N022 2769 aa1.68□□□□□ -2.14
TOPBP1-205ENST00000506779 URB1O60287 2271 aaKnown RBP1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms