RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 ZNF14P17017 642 aaPredicted RBP2.59□□□□□ -1.99
SNX13-211ENST00000496855 BIKQ13323 160 aa2.59□□□□□ -1.99
SNX13-211ENST00000496855 NEDD8Q15843 81 aa2.59□□□□□ -1.99
SNX13-211ENST00000496855 LINC00305Q7Z4B0 112 aa2.59□□□□□ -1.99
SNX13-211ENST00000496855 OR51A4Q8NGJ6 313 aa2.59□□□□□ -1.99
SNX13-211ENST00000496855 TP53RKQ96S44 253 aa2.59□□□□□ -1.99
SNX13-211ENST00000496855 ADAT1Q9BUB4 502 aaKnown RBP2.59□□□□□ -1.99
SNX13-211ENST00000496855 NPCDR1Q9BY65 106 aa2.59□□□□□ -1.99
SNX13-211ENST00000496855 WDR7Q9Y4E6 1490 aa2.59□□□□□ -1.99
SNX13-211ENST00000496855 KDM5CP41229 1560 aa2.59□□□□□ -1.99
SNX13-211ENST00000496855 PTPRSQ13332 1948 aa2.59□□□□□ -2
SNX13-211ENST00000496855 OBSL1O75147 1896 aa2.59□□□□□ -2
SNX13-211ENST00000496855 A2MP01023 1474 aa2.59□□□□□ -2
SNX13-211ENST00000496855 SCAF11Q99590 1463 aaKnown RBP2.59□□□□□ -2
SNX13-211ENST00000496855 TRAV7A0A075B6U4 112 aa2.58□□□□□ -2
SNX13-211ENST00000496855 M0R2Z0 102 aa2.58□□□□□ -2
SNX13-211ENST00000496855 NDUFB3O43676 98 aa2.58□□□□□ -2
SNX13-211ENST00000496855 RPS25P62851 125 aaKnown RBP2.58□□□□□ -2
SNX13-211ENST00000496855 DYNLT1P63172 113 aa2.58□□□□□ -2
SNX13-211ENST00000496855 NAA38Q9BRA0 125 aaKnown RBP2.58□□□□□ -2
SNX13-211ENST00000496855 EPDR1Q9UM22 224 aa2.58□□□□□ -2
SNX13-211ENST00000496855 BLMP54132 1417 aaPredicted RBP2.58□□□□□ -2
SNX13-211ENST00000496855 SUPT6HQ7KZ85 1726 aaKnown RBP2.58□□□□□ -2
SNX13-211ENST00000496855 KDM5BQ9UGL1 1544 aa2.58□□□□□ -2
SNX13-211ENST00000496855 SCN9AQ15858 1988 aa2.58□□□□□ -2
SNX13-211ENST00000496855 IGKV1D-17A0A075B6S4 117 aa2.58□□□□□ -2
SNX13-211ENST00000496855 A0A1B0GVG6 124 aa2.58□□□□□ -2
SNX13-211ENST00000496855 TMEM235A6NFC5 223 aa2.58□□□□□ -2
SNX13-211ENST00000496855 CPSF4O95639 269 aaKnown RBP2.58□□□□□ -2
SNX13-211ENST00000496855 MSMBP08118 114 aa2.58□□□□□ -2
SNX13-211ENST00000496855 TSPAN19P0C672 248 aa2.58□□□□□ -2
SNX13-211ENST00000496855 CSRP1P21291 193 aaKnown RBP2.58□□□□□ -2
SNX13-211ENST00000496855 FAM27BQ5VT28 67 aa2.58□□□□□ -2
SNX13-211ENST00000496855 SPINT4Q6UDR6 99 aa2.58□□□□□ -2
SNX13-211ENST00000496855 OR4K15Q8NH41 348 aa2.58□□□□□ -2
SNX13-211ENST00000496855 NAT14Q8WUY8 206 aa2.58□□□□□ -2
SNX13-211ENST00000496855 C1orf54Q8WWF1 131 aa2.58□□□□□ -2
SNX13-211ENST00000496855 AQP3Q92482 292 aa2.58□□□□□ -2
SNX13-211ENST00000496855 LXNQ9BS40 222 aa2.58□□□□□ -2
SNX13-211ENST00000496855 LINC00470Q9BZP3 86 aa2.58□□□□□ -2
SNX13-211ENST00000496855 HS3ST2Q9Y278 367 aa2.58□□□□□ -2
SNX13-211ENST00000496855 HSPE1-MOB4S4R3N1 261 aa2.58□□□□□ -2
SNX13-211ENST00000496855 PHLPP1O60346 1717 aa2.57□□□□□ -2
SNX13-211ENST00000496855 KIF26AQ9ULI4 1882 aaPredicted RBP2.57□□□□□ -2
SNX13-211ENST00000496855 ROBO1Q9Y6N7 1651 aa2.57□□□□□ -2
SNX13-211ENST00000496855 PRR14LQ5THK1 2151 aa2.57□□□□□ -2
SNX13-211ENST00000496855 MALRD1Q5VYJ5 2156 aa2.57□□□□□ -2
SNX13-211ENST00000496855 ANKRD31Q8N7Z5 1873 aa2.57□□□□□ -2
SNX13-211ENST00000496855 TRGV5A0A0B4J1U4 118 aa2.57□□□□□ -2
SNX13-211ENST00000496855 TRAV13-1A0A0B4J241 112 aa2.57□□□□□ -2
SNX13-211ENST00000496855 ZNF727A8MUV8 499 aa2.57□□□□□ -2
SNX13-211ENST00000496855 H3BMG7 143 aa2.57□□□□□ -2
SNX13-211ENST00000496855 SLC22A1O15245 554 aa2.57□□□□□ -2
SNX13-211ENST00000496855 PAEPP09466 180 aa2.57□□□□□ -2
SNX13-211ENST00000496855 HLA-EP13747 358 aa2.57□□□□□ -2
SNX13-211ENST00000496855 RPL22P35268 128 aaKnown RBP2.57□□□□□ -2
SNX13-211ENST00000496855 FOXA3P55318 350 aaPredicted RBP2.57□□□□□ -2
SNX13-211ENST00000496855 DIAPH2-AS1Q14236 149 aa2.57□□□□□ -2
SNX13-211ENST00000496855 C4orf22Q6V702 233 aa2.57□□□□□ -2
SNX13-211ENST00000496855 ZNF418Q8TF45 676 aaPredicted RBP2.57□□□□□ -2
SNX13-211ENST00000496855 TXNL4BQ9NX01 149 aaKnown RBP2.57□□□□□ -2
SNX13-211ENST00000496855 MARCOQ9UEW3 520 aaPredicted RBP2.57□□□□□ -2
SNX13-211ENST00000496855 ABCC2Q92887 1545 aa2.57□□□□□ -2
SNX13-211ENST00000496855 GREB1Q4ZG55 1949 aa2.56□□□□□ -2
SNX13-211ENST00000496855 SZT2Q5T011 3432 aa2.56□□□□□ -2
SNX13-211ENST00000496855 FANCAO15360 1455 aa2.56□□□□□ -2
SNX13-211ENST00000496855 DSPPQ9NZW4 1301 aa2.56□□□□□ -2
SNX13-211ENST00000496855 UNC80Q8N2C7 3258 aa2.56□□□□□ -2
SNX13-211ENST00000496855 CREBL2O60519 120 aaPredicted RBP2.56□□□□□ -2
SNX13-211ENST00000496855 IGKV1-17P01599 117 aa2.56□□□□□ -2
SNX13-211ENST00000496855 RPL35P42766 123 aaKnown RBP2.56□□□□□ -2
SNX13-211ENST00000496855 NCS1P62166 190 aa2.56□□□□□ -2
SNX13-211ENST00000496855 YPEL2Q96QA6 119 aa2.56□□□□□ -2
SNX13-211ENST00000496855 C12orf57Q99622 126 aa2.56□□□□□ -2
SNX13-211ENST00000496855 GINS4Q9BRT9 223 aa2.56□□□□□ -2
SNX13-211ENST00000496855 TCEAL2Q9H3H9 227 aaPredicted RBP2.56□□□□□ -2
SNX13-211ENST00000496855 CDK13Q14004 1512 aaKnown RBP2.56□□□□□ -2
SNX13-211ENST00000496855 MAGI3Q5TCQ9 1506 aa2.56□□□□□ -2
SNX13-211ENST00000496855 SCN8AQ9UQD0 1980 aa2.56□□□□□ -2
SNX13-211ENST00000496855 CFTRP13569 1480 aa2.56□□□□□ -2
SNX13-211ENST00000496855 MROH2BQ7Z745 1585 aa2.55□□□□□ -2
SNX13-211ENST00000496855 C3P01024 1663 aa2.55□□□□□ -2
SNX13-211ENST00000496855 FAM135BQ49AJ0 1406 aa2.55□□□□□ -2
SNX13-211ENST00000496855 TNS3Q68CZ2 1445 aa2.55□□□□□ -2
SNX13-211ENST00000496855 ERBINQ96RT1 1412 aa2.55□□□□□ -2
SNX13-211ENST00000496855 TRANK1O15050 2925 aa2.55□□□□□ -2
SNX13-211ENST00000496855 WDR97A6NE52 1622 aa2.55□□□□□ -2
SNX13-211ENST00000496855 TRBV27A0A0K0K1C4 114 aa2.55□□□□□ -2
SNX13-211ENST00000496855 B4DSR2 109 aa2.55□□□□□ -2
SNX13-211ENST00000496855 H7C2G1 150 aa2.55□□□□□ -2
SNX13-211ENST00000496855 HIST1H2BKO60814 126 aa2.55□□□□□ -2
SNX13-211ENST00000496855 IGLV3-19P01714 112 aa2.55□□□□□ -2
SNX13-211ENST00000496855 TCRAP04437 139 aa2.55□□□□□ -2
SNX13-211ENST00000496855 HIST1H2BJP06899 126 aa2.55□□□□□ -2
SNX13-211ENST00000496855 HRES1P13985 223 aa2.55□□□□□ -2
SNX13-211ENST00000496855 ZNF25P17030 456 aaPredicted RBP2.55□□□□□ -2
SNX13-211ENST00000496855 S100PP25815 95 aa2.55□□□□□ -2
SNX13-211ENST00000496855 CCSMST1Q4G0I0 132 aa2.55□□□□□ -2
SNX13-211ENST00000496855 KHDC3LQ587J8 217 aa2.55□□□□□ -2
SNX13-211ENST00000496855 IFT20Q8IY31 132 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms