RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 SLC25A39Q9BZJ4 359 aaPredicted RBP10.34□□□□□ -0.75
PTPN7-217ENST00000495688 CACNA1BQ00975 2339 aa10.34□□□□□ -0.75
PTPN7-217ENST00000495688 IGLV2-11P01706 119 aa10.33□□□□□ -0.76
PTPN7-217ENST00000495688 COL8A1P27658 744 aa10.33□□□□□ -0.76
PTPN7-217ENST00000495688 KLHDC1Q8N7A1 406 aa10.33□□□□□ -0.76
PTPN7-217ENST00000495688 DAZAP1Q96EP5 407 aaKnown RBP10.33□□□□□ -0.76
PTPN7-217ENST00000495688 MCRIP2Q9BUT9 160 aaKnown RBP10.33□□□□□ -0.76
PTPN7-217ENST00000495688 RALYQ9UKM9 306 aaKnown RBP10.33□□□□□ -0.76
PTPN7-217ENST00000495688 S4R3C0 116 aa10.33□□□□□ -0.76
PTPN7-217ENST00000495688 WNK2Q9Y3S1 2297 aa10.33□□□□□ -0.76
PTPN7-217ENST00000495688 TRAV9-2A0A087WT02 112 aa10.33□□□□□ -0.76
PTPN7-217ENST00000495688 IGHV1-24A0A0C4DH33 117 aa10.33□□□□□ -0.76
PTPN7-217ENST00000495688 ZNF785A8K8V0 405 aa10.33□□□□□ -0.76
PTPN7-217ENST00000495688 Q86TA4 180 aa10.33□□□□□ -0.76
PTPN7-217ENST00000495688 ZFP30Q9Y2G7 519 aa10.33□□□□□ -0.76
PTPN7-217ENST00000495688 ATRXP46100 2492 aa10.33□□□□□ -0.76
PTPN7-217ENST00000495688 PTPRQQ9UMZ3 2332 aa10.33□□□□□ -0.76
PTPN7-217ENST00000495688 IGKV1-17P01599 117 aa10.32□□□□□ -0.76
PTPN7-217ENST00000495688 PLGLAQ15195 96 aa10.32□□□□□ -0.76
PTPN7-217ENST00000495688 RBPMS2Q6ZRY4 209 aaKnown RBP10.32□□□□□ -0.76
PTPN7-217ENST00000495688 SMIM12Q96EX1 92 aa10.32□□□□□ -0.76
PTPN7-217ENST00000495688 VSTM5A8MXK1 200 aa10.32□□□□□ -0.76
PTPN7-217ENST00000495688 I3L2K1 104 aa10.32□□□□□ -0.76
PTPN7-217ENST00000495688 SIAH2O43255 324 aa10.32□□□□□ -0.76
PTPN7-217ENST00000495688 PLP1P60201 277 aa10.32□□□□□ -0.76
PTPN7-217ENST00000495688 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.31□□□□□ -0.76
PTPN7-217ENST00000495688 LY6HO94772 140 aa10.31□□□□□ -0.76
PTPN7-217ENST00000495688 UNQ5815/PRO19632Q6UWF5 114 aa10.31□□□□□ -0.76
PTPN7-217ENST00000495688 BCL6BQ8N143 479 aaPredicted RBP10.31□□□□□ -0.76
PTPN7-217ENST00000495688 RPEQ96AT9 228 aa10.31□□□□□ -0.76
PTPN7-217ENST00000495688 RASL11BQ9BPW5 248 aa10.31□□□□□ -0.76
PTPN7-217ENST00000495688 TMEM70Q9BUB7 260 aa10.31□□□□□ -0.76
PTPN7-217ENST00000495688 ZNF492Q9P255 531 aa10.31□□□□□ -0.76
PTPN7-217ENST00000495688 RELQ04864 619 aaPredicted RBP10.31□□□□□ -0.76
PTPN7-217ENST00000495688 ANKRD39Q53RE8 183 aa10.31□□□□□ -0.76
PTPN7-217ENST00000495688 KLF17Q5JT82 389 aaPredicted RBP10.31□□□□□ -0.76
PTPN7-217ENST00000495688 OR4F17Q8NGA8 305 aa10.31□□□□□ -0.76
PTPN7-217ENST00000495688 TIMM8BQ9Y5J9 83 aaPredicted RBP10.31□□□□□ -0.76
PTPN7-217ENST00000495688 PPIAL4CA0A0B4J2A2 164 aa10.3□□□□□ -0.76
PTPN7-217ENST00000495688 OVOL3O00110 214 aa10.3□□□□□ -0.76
PTPN7-217ENST00000495688 PPIAL4GP0DN37 164 aa10.3□□□□□ -0.76
PTPN7-217ENST00000495688 CT83Q5H943 113 aa10.3□□□□□ -0.76
PTPN7-217ENST00000495688 ZC2HC1AQ96GY0 325 aa10.3□□□□□ -0.76
PTPN7-217ENST00000495688 OTORQ9NRC9 128 aa10.3□□□□□ -0.76
PTPN7-217ENST00000495688 CELSR1Q9NYQ6 3014 aa10.3□□□□□ -0.76
PTPN7-217ENST00000495688 IGF2RP11717 2491 aa10.3□□□□□ -0.76
PTPN7-217ENST00000495688 LOC102724200A0A096LPH7 203 aaPredicted RBP10.3□□□□□ -0.76
PTPN7-217ENST00000495688 hDV102S1A0JD36 115 aa10.3□□□□□ -0.76
PTPN7-217ENST00000495688 OR4C46A6NHA9 309 aa10.3□□□□□ -0.76
PTPN7-217ENST00000495688 NPIPB6E9PJ23 425 aa10.3□□□□□ -0.76
PTPN7-217ENST00000495688 H0Y8G0 127 aa10.3□□□□□ -0.76
PTPN7-217ENST00000495688 CHEK1O14757 476 aa10.3□□□□□ -0.76
PTPN7-217ENST00000495688 TCF21O43680 179 aa10.3□□□□□ -0.76
PTPN7-217ENST00000495688 CNIH1O95406 144 aa10.3□□□□□ -0.76
PTPN7-217ENST00000495688 APOHP02749 345 aaPredicted RBP10.3□□□□□ -0.76
PTPN7-217ENST00000495688 CSN3P07498 182 aa10.3□□□□□ -0.76
PTPN7-217ENST00000495688 APOBEC3AP31941 199 aaPredicted RBP10.3□□□□□ -0.76
PTPN7-217ENST00000495688 FBLN7Q53RD9 439 aa10.3□□□□□ -0.76
PTPN7-217ENST00000495688 LINC01560Q8TB33 94 aa10.3□□□□□ -0.76
PTPN7-217ENST00000495688 TIMM23O14925 209 aa10.3□□□□□ -0.76
PTPN7-217ENST00000495688 TNFRSF14Q92956 283 aa10.3□□□□□ -0.76
PTPN7-217ENST00000495688 K7EIM0 57 aa10.29□□□□□ -0.76
PTPN7-217ENST00000495688 M0R3E3 92 aa10.29□□□□□ -0.76
PTPN7-217ENST00000495688 LEPROTL1O95214 131 aa10.29□□□□□ -0.76
PTPN7-217ENST00000495688 ARMS2P0C7Q2 107 aa10.29□□□□□ -0.76
PTPN7-217ENST00000495688 LINC00614P0C842 121 aa10.29□□□□□ -0.76
PTPN7-217ENST00000495688 GRNP28799 593 aaKnown RBP10.29□□□□□ -0.76
PTPN7-217ENST00000495688 RBPJQ06330 500 aa10.29□□□□□ -0.76
PTPN7-217ENST00000495688 HILPDAQ9Y5L2 63 aa10.29□□□□□ -0.76
PTPN7-217ENST00000495688 SYS1-DBNDD2H3BUS1 97 aa10.29□□□□□ -0.76
PTPN7-217ENST00000495688 PMCHL2Q9BQD1 86 aa10.29□□□□□ -0.76
PTPN7-217ENST00000495688 GFRA4Q9GZZ7 299 aa10.29□□□□□ -0.76
PTPN7-217ENST00000495688 NGBQ9NPG2 151 aa10.29□□□□□ -0.76
PTPN7-217ENST00000495688 ONECUT1Q9UBC0 465 aa10.29□□□□□ -0.76
PTPN7-217ENST00000495688 MRPS16Q9Y3D3 137 aaKnown RBP10.29□□□□□ -0.76
PTPN7-217ENST00000495688 A0A1W2PRD5 423 aa10.28□□□□□ -0.76
PTPN7-217ENST00000495688 A0A1W2PRF3 423 aa10.28□□□□□ -0.76
PTPN7-217ENST00000495688 A0A1W2PRM7 423 aa10.28□□□□□ -0.76
PTPN7-217ENST00000495688 TCF15Q12870 199 aa10.28□□□□□ -0.76
PTPN7-217ENST00000495688 TPPP3Q9BW30 176 aa10.28□□□□□ -0.76
PTPN7-217ENST00000495688 TRBV19A0A075B6N1 114 aa10.28□□□□□ -0.76
PTPN7-217ENST00000495688 SFTPCP11686 197 aa10.28□□□□□ -0.76
PTPN7-217ENST00000495688 TMEM14CQ9P0S9 112 aa10.28□□□□□ -0.76
PTPN7-217ENST00000495688 SOX21Q9Y651 276 aaPredicted RBP10.28□□□□□ -0.76
PTPN7-217ENST00000495688 VPS13CQ709C8 3753 aa10.27□□□□□ -0.77
PTPN7-217ENST00000495688 B9A039 149 aa10.27□□□□□ -0.77
PTPN7-217ENST00000495688 CRXO43186 299 aaPredicted RBP10.27□□□□□ -0.77
PTPN7-217ENST00000495688 CD3EP07766 207 aa10.27□□□□□ -0.77
PTPN7-217ENST00000495688 HOXB4P17483 251 aaPredicted RBP10.27□□□□□ -0.77
PTPN7-217ENST00000495688 CRIP1P50238 77 aa10.27□□□□□ -0.77
PTPN7-217ENST00000495688 SIGLEC15Q6ZMC9 328 aa10.27□□□□□ -0.77
PTPN7-217ENST00000495688 SPTBN1Q01082 2364 aaKnown RBP10.27□□□□□ -0.77
PTPN7-217ENST00000495688 IL4P05112 153 aa10.27□□□□□ -0.77
PTPN7-217ENST00000495688 PAX2Q02962 417 aa10.27□□□□□ -0.77
PTPN7-217ENST00000495688 MUC15Q8N387 334 aa10.27□□□□□ -0.77
PTPN7-217ENST00000495688 ZNF491Q8N8L2 437 aa10.27□□□□□ -0.77
PTPN7-217ENST00000495688 CHCHD1Q96BP2 118 aaKnown RBP10.27□□□□□ -0.77
PTPN7-217ENST00000495688 NDFIP1Q9BT67 221 aa10.27□□□□□ -0.77
PTPN7-217ENST00000495688 TMUB1Q9BVT8 246 aa10.27□□□□□ -0.77
PTPN7-217ENST00000495688 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms