RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-222ENST00000494672 COX7CP15954 63 aa3.49□□□□□ -1.85
CCDC66-222ENST00000494672 CBLN1P23435 193 aa3.49□□□□□ -1.85
CCDC66-222ENST00000494672 RPS11P62280 158 aaKnown RBP eCLIP3.49□□□□□ -1.85
CCDC66-222ENST00000494672 GNB2P62879 340 aa3.49□□□□□ -1.85
CCDC66-222ENST00000494672 WFDC2Q14508 124 aa3.49□□□□□ -1.85
CCDC66-222ENST00000494672 ELOCQ15369 112 aa3.49□□□□□ -1.85
CCDC66-222ENST00000494672 SP6Q3SY56 376 aa3.49□□□□□ -1.85
CCDC66-222ENST00000494672 MSRB3Q8IXL7 192 aa3.49□□□□□ -1.85
CCDC66-222ENST00000494672 LINC00311Q8N616 119 aa3.49□□□□□ -1.85
CCDC66-222ENST00000494672 OR2A1Q8NGT9 310 aa3.49□□□□□ -1.85
CCDC66-222ENST00000494672 OR2T10Q8NGZ9 312 aa3.49□□□□□ -1.85
CCDC66-222ENST00000494672 NABP1Q96AH0 204 aa3.49□□□□□ -1.85
CCDC66-222ENST00000494672 ZC2HC1AQ96GY0 325 aa3.49□□□□□ -1.85
CCDC66-222ENST00000494672 C18orf15Q96N68 181 aa3.49□□□□□ -1.85
CCDC66-222ENST00000494672 CST11Q9H112 138 aa3.49□□□□□ -1.85
CCDC66-222ENST00000494672 PLEKHF2Q9H8W4 249 aa3.49□□□□□ -1.85
CCDC66-222ENST00000494672 MANBALQ9NQG1 85 aa3.49□□□□□ -1.85
CCDC66-222ENST00000494672 CYTL1Q9NRR1 136 aa3.49□□□□□ -1.85
CCDC66-222ENST00000494672 ZNF835Q9Y2P0 537 aa3.49□□□□□ -1.85
CCDC66-222ENST00000494672 DNAJC15Q9Y5T4 150 aa3.49□□□□□ -1.85
CCDC66-222ENST00000494672 GON4LQ3T8J9 2241 aa3.49□□□□□ -1.85
CCDC66-222ENST00000494672 ALS2Q96Q42 1657 aa3.49□□□□□ -1.85
CCDC66-222ENST00000494672 LINC01619G3V211 115 aa3.48□□□□□ -1.85
CCDC66-222ENST00000494672 PDCD6O75340 191 aa3.48□□□□□ -1.85
CCDC66-222ENST00000494672 RBP4P02753 201 aa3.48□□□□□ -1.85
CCDC66-222ENST00000494672 SRP19P09132 144 aaKnown RBP3.48□□□□□ -1.85
CCDC66-222ENST00000494672 SMIM13P0DJ93 91 aa3.48□□□□□ -1.85
CCDC66-222ENST00000494672 ELK1P19419 428 aa3.48□□□□□ -1.85
CCDC66-222ENST00000494672 HLA-DMBP28068 263 aa3.48□□□□□ -1.85
CCDC66-222ENST00000494672 LIM2P55344 173 aa3.48□□□□□ -1.85
CCDC66-222ENST00000494672 NMSQ5H8A3 153 aa3.48□□□□□ -1.85
CCDC66-222ENST00000494672 LCE3AQ5TA76 89 aa3.48□□□□□ -1.85
CCDC66-222ENST00000494672 PVRIGQ6DKI7 326 aa3.48□□□□□ -1.85
CCDC66-222ENST00000494672 TIFABQ6ZNK6 161 aa3.48□□□□□ -1.85
CCDC66-222ENST00000494672 SPATA12Q7Z6I5 190 aa3.48□□□□□ -1.85
CCDC66-222ENST00000494672 TMEM256Q8N2U0 113 aa3.48□□□□□ -1.85
CCDC66-222ENST00000494672 DRAM1Q8N682 238 aa3.48□□□□□ -1.85
CCDC66-222ENST00000494672 FAM213BQ8TBF2 198 aa3.48□□□□□ -1.85
CCDC66-222ENST00000494672 MRPL30Q8TCC3 161 aaKnown RBP3.48□□□□□ -1.85
CCDC66-222ENST00000494672 SMIM4Q8WVI0 70 aa3.48□□□□□ -1.85
CCDC66-222ENST00000494672 METTL26Q96S19 204 aa3.48□□□□□ -1.85
CCDC66-222ENST00000494672 SHANK2-AS3Q9BTD1 123 aa3.48□□□□□ -1.85
CCDC66-222ENST00000494672 SERP1Q9Y6X1 66 aa3.48□□□□□ -1.85
CCDC66-222ENST00000494672 C3P01024 1663 aa3.48□□□□□ -1.85
CCDC66-222ENST00000494672 RALGAPA1Q6GYQ0 2036 aa3.48□□□□□ -1.85
CCDC66-222ENST00000494672 NLRC5Q86WI3 1866 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 TJP1Q07157 1748 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 LAMA4Q16363 1823 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 FAM208AQ9UK61 1670 aaKnown RBP3.47□□□□□ -1.85
CCDC66-222ENST00000494672 TRBV7-7A0A0K0K1E9 115 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 WI2-2373I1.2A0A1W2PRP0 233 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 RBAKDNA6NC62 111 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 A8MWL6 223 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 SSSCA1O60232 199 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 IGHV3-7P01780 117 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 HOXB7P09629 217 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 PTHLHP12272 177 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 IGLL1P15814 213 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 QRFPP83859 136 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 CST6Q15828 149 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 HIGD2BQ4VC39 106 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 LINC01545Q5VT33 79 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 TMEM136Q6ZRR5 245 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 LINC00305Q7Z4B0 112 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 BPIFA4PQ86YQ2 179 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 SLC22A24Q8N4F4 322 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 RNF182Q8N6D2 247 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 POM121L12Q8N7R1 296 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 CYB561D1Q8N8Q1 229 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 STAG3L4Q8TBR4 150 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 GTSF1Q8WW33 167 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 GEMIN6Q8WXD5 167 aaKnown RBP3.47□□□□□ -1.85
CCDC66-222ENST00000494672 FGF11Q92914 225 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 RBMXL1Q96E39 390 aaKnown RBP3.47□□□□□ -1.85
CCDC66-222ENST00000494672 FAM19A4Q96LR4 140 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 PAXXQ9BUH6 204 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 GABARAPL3Q9BY60 117 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 LIME1Q9H400 295 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 TNFRSF19Q9NS68 423 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 SLC39A9Q9NUM3 307 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 C19orf25Q9UFG5 118 aaPredicted RBP3.47□□□□□ -1.85
CCDC66-222ENST00000494672 PRO0461Q9UI25 63 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 LSM2Q9Y333 95 aaKnown RBP3.47□□□□□ -1.85
CCDC66-222ENST00000494672 TRAPPC1Q9Y5R8 145 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 PTPRMP28827 1452 aa3.47□□□□□ -1.85
CCDC66-222ENST00000494672 RAI1Q7Z5J4 1906 aaPredicted RBP3.46□□□□□ -1.85
CCDC66-222ENST00000494672 SCN2AQ99250 2005 aa3.46□□□□□ -1.86
CCDC66-222ENST00000494672 TRAV9-1A0A075B6T8 112 aa3.46□□□□□ -1.86
CCDC66-222ENST00000494672 A0A0A6YYD4 124 aa3.46□□□□□ -1.86
CCDC66-222ENST00000494672 IGHV1-58A0A0C4DH39 117 aa3.46□□□□□ -1.86
CCDC66-222ENST00000494672 A0A1B0GXF2 115 aa3.46□□□□□ -1.86
CCDC66-222ENST00000494672 IRGMA1A4Y4 181 aa3.46□□□□□ -1.86
CCDC66-222ENST00000494672 H3BT86 120 aa3.46□□□□□ -1.86
CCDC66-222ENST00000494672 SS18L1O75177 396 aaPredicted RBP3.46□□□□□ -1.86
CCDC66-222ENST00000494672 SCRG1O75711 98 aa3.46□□□□□ -1.86
CCDC66-222ENST00000494672 SERF1AO75920 110 aa3.46□□□□□ -1.86
CCDC66-222ENST00000494672 IGKV3-15P01624 115 aa3.46□□□□□ -1.86
CCDC66-222ENST00000494672 GYPBP06028 91 aa3.46□□□□□ -1.86
CCDC66-222ENST00000494672 CD55P08174 381 aa3.46□□□□□ -1.86
CCDC66-222ENST00000494672 HLA-DRB4P13762 266 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms