RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 MBD3L1Q8WWY6 194 aa10.15□□□□□ -0.78
TRAIP-210ENST00000489948 RAB24Q969Q5 203 aa10.15□□□□□ -0.78
TRAIP-210ENST00000489948 SAT2Q96F10 170 aaPredicted RBP10.15□□□□□ -0.78
TRAIP-210ENST00000489948 GRAMD2BQ96HH9 432 aa10.15□□□□□ -0.78
TRAIP-210ENST00000489948 FAM167A-AS1Q96KT0 104 aa10.15□□□□□ -0.78
TRAIP-210ENST00000489948 TMEM14CQ9P0S9 112 aa10.15□□□□□ -0.78
TRAIP-210ENST00000489948 SMPXQ9UHP9 88 aa10.15□□□□□ -0.78
TRAIP-210ENST00000489948 DNAH3Q8TD57 4116 aa10.14□□□□□ -0.79
TRAIP-210ENST00000489948 TRAV1-1A0A0B4J248 108 aa10.14□□□□□ -0.79
TRAIP-210ENST00000489948 CHEK1O14757 476 aa10.14□□□□□ -0.79
TRAIP-210ENST00000489948 ZNF207O43670 478 aaKnown RBP10.14□□□□□ -0.79
TRAIP-210ENST00000489948 CD5P06127 495 aa10.14□□□□□ -0.79
TRAIP-210ENST00000489948 CSN3P07498 182 aa10.14□□□□□ -0.79
TRAIP-210ENST00000489948 FOLR2P14207 255 aa10.14□□□□□ -0.79
TRAIP-210ENST00000489948 GP9P14770 177 aa10.14□□□□□ -0.79
TRAIP-210ENST00000489948 RPL7P18124 248 aaKnown RBP10.14□□□□□ -0.79
TRAIP-210ENST00000489948 CBLN1P23435 193 aa10.14□□□□□ -0.79
TRAIP-210ENST00000489948 FHITP49789 147 aa10.14□□□□□ -0.79
TRAIP-210ENST00000489948 PQLC2Q6ZP29 291 aa10.14□□□□□ -0.79
TRAIP-210ENST00000489948 SSX7Q7RTT5 188 aa10.14□□□□□ -0.79
TRAIP-210ENST00000489948 ELOVL1Q9BW60 279 aa10.14□□□□□ -0.79
TRAIP-210ENST00000489948 SLC25A2Q9BXI2 301 aa10.14□□□□□ -0.79
TRAIP-210ENST00000489948 MAP1LC3B2A6NCE7 125 aa10.13□□□□□ -0.79
TRAIP-210ENST00000489948 ZNF705EA8MWA4 302 aaPredicted RBP10.13□□□□□ -0.79
TRAIP-210ENST00000489948 MRPS12O15235 138 aaKnown RBP10.13□□□□□ -0.79
TRAIP-210ENST00000489948 APOHP02749 345 aaPredicted RBP10.13□□□□□ -0.79
TRAIP-210ENST00000489948 BLOC1S1P78537 153 aa10.13□□□□□ -0.79
TRAIP-210ENST00000489948 ADAMTSL5Q6ZMM2 481 aa10.13□□□□□ -0.79
TRAIP-210ENST00000489948 BPIFA4PQ86YQ2 179 aa10.13□□□□□ -0.79
TRAIP-210ENST00000489948 LYPD6BQ8NI32 183 aa10.13□□□□□ -0.79
TRAIP-210ENST00000489948 RHPN1-AS1Q9BWJ2 59 aa10.13□□□□□ -0.79
TRAIP-210ENST00000489948 MAP1LC3BQ9GZQ8 125 aa10.13□□□□□ -0.79
TRAIP-210ENST00000489948 A0A087X0K7 114 aa10.12□□□□□ -0.79
TRAIP-210ENST00000489948 CXorf1O96002 111 aa10.12□□□□□ -0.79
TRAIP-210ENST00000489948 HBE1P02100 147 aa10.12□□□□□ -0.79
TRAIP-210ENST00000489948 H2AFB1P0C5Y9 115 aa10.12□□□□□ -0.79
TRAIP-210ENST00000489948 EDN2P20800 178 aa10.12□□□□□ -0.79
TRAIP-210ENST00000489948 MEOX2P50222 304 aa10.12□□□□□ -0.79
TRAIP-210ENST00000489948 LEMD1Q68G75 181 aa10.12□□□□□ -0.79
TRAIP-210ENST00000489948 WFDC9Q8NEX5 89 aa10.12□□□□□ -0.79
TRAIP-210ENST00000489948 SUN5Q8TC36 379 aa10.12□□□□□ -0.79
TRAIP-210ENST00000489948 ZNF503Q96F45 646 aa10.12□□□□□ -0.79
TRAIP-210ENST00000489948 HELTA6NFD8 242 aa10.11□□□□□ -0.79
TRAIP-210ENST00000489948 TEX46H3BTG2 121 aa10.11□□□□□ -0.79
TRAIP-210ENST00000489948 OR7C2O60412 319 aa10.11□□□□□ -0.79
TRAIP-210ENST00000489948 NMBP08949 121 aa10.11□□□□□ -0.79
TRAIP-210ENST00000489948 ARL14EPLP0DKL9 152 aa10.11□□□□□ -0.79
TRAIP-210ENST00000489948 IGLC2P0DOY2 106 aa10.11□□□□□ -0.79
TRAIP-210ENST00000489948 GALR1P47211 349 aa10.11□□□□□ -0.79
TRAIP-210ENST00000489948 FAM90A2PQ658T7 463 aa10.11□□□□□ -0.79
TRAIP-210ENST00000489948 SIGLEC15Q6ZMC9 328 aa10.11□□□□□ -0.79
TRAIP-210ENST00000489948 OR8I2Q8N0Y5 310 aa10.11□□□□□ -0.79
TRAIP-210ENST00000489948 OR2K2Q8NGT1 345 aa10.11□□□□□ -0.79
TRAIP-210ENST00000489948 MLXQ9UH92 298 aa10.11□□□□□ -0.79
TRAIP-210ENST00000489948 PKD1L1Q8TDX9 2849 aa10.11□□□□□ -0.79
TRAIP-210ENST00000489948 IGHV3-49A0A0A0MS15 119 aa10.1□□□□□ -0.79
TRAIP-210ENST00000489948 TRAV5A0A0B4J249 113 aa10.1□□□□□ -0.79
TRAIP-210ENST00000489948 WIPF1O43516 503 aa10.1□□□□□ -0.79
TRAIP-210ENST00000489948 INSL3P51460 131 aa10.1□□□□□ -0.79
TRAIP-210ENST00000489948 PMS2P11Q13670 270 aa10.1□□□□□ -0.79
TRAIP-210ENST00000489948 PDE6HQ13956 83 aa10.1□□□□□ -0.79
TRAIP-210ENST00000489948 GUK1Q16774 197 aa10.1□□□□□ -0.79
TRAIP-210ENST00000489948 CLLU1Q5K131 121 aa10.1□□□□□ -0.79
TRAIP-210ENST00000489948 SAMD13Q5VXD3 122 aa10.1□□□□□ -0.79
TRAIP-210ENST00000489948 LCN15Q6UWW0 184 aa10.1□□□□□ -0.79
TRAIP-210ENST00000489948 SPATA3Q8NHX4 192 aa10.1□□□□□ -0.79
TRAIP-210ENST00000489948 FXYD5Q96DB9 178 aa10.1□□□□□ -0.79
TRAIP-210ENST00000489948 PAXXQ9BUH6 204 aa10.1□□□□□ -0.79
TRAIP-210ENST00000489948 MCRIP2Q9BUT9 160 aaKnown RBP10.1□□□□□ -0.79
TRAIP-210ENST00000489948 OR51M1Q9H341 326 aa10.1□□□□□ -0.79
TRAIP-210ENST00000489948 HRH4Q9H3N8 390 aa10.1□□□□□ -0.79
TRAIP-210ENST00000489948 TMEM167BQ9NRX6 74 aa10.1□□□□□ -0.79
TRAIP-210ENST00000489948 ARL2-SNX15V9GYD0 113 aa10.1□□□□□ -0.79
TRAIP-210ENST00000489948 IGHV3OR16-13A0A075B7E8 117 aa10.09□□□□□ -0.79
TRAIP-210ENST00000489948 IGHV3-74A0A0B4J1X5 117 aa10.09□□□□□ -0.79
TRAIP-210ENST00000489948 TRAV25A0A0B4J276 109 aa10.09□□□□□ -0.79
TRAIP-210ENST00000489948 IGHV3-66A0A0C4DH42 116 aa10.09□□□□□ -0.79
TRAIP-210ENST00000489948 ZNF253O75346 499 aa10.09□□□□□ -0.79
TRAIP-210ENST00000489948 HIST1H1EP10412 219 aaKnown RBP10.09□□□□□ -0.79
TRAIP-210ENST00000489948 GCHFRP30047 84 aa10.09□□□□□ -0.79
TRAIP-210ENST00000489948 PSMB3P49720 205 aa10.09□□□□□ -0.79
TRAIP-210ENST00000489948 UBE2L3P68036 154 aaKnown RBP10.09□□□□□ -0.79
TRAIP-210ENST00000489948 DYNLRB2Q8TF09 96 aa10.09□□□□□ -0.79
TRAIP-210ENST00000489948 SFT2D1Q8WV19 159 aa10.09□□□□□ -0.79
TRAIP-210ENST00000489948 TRAV2A0A0B4J234 112 aa10.08□□□□□ -0.8
TRAIP-210ENST00000489948 TSPAN4O14817 238 aa10.08□□□□□ -0.8
TRAIP-210ENST00000489948 HMGB3O15347 200 aaKnown RBP10.08□□□□□ -0.8
TRAIP-210ENST00000489948 SAP30O75446 220 aa10.08□□□□□ -0.8
TRAIP-210ENST00000489948 EIF3GO75821 320 aaKnown RBP eCLIP10.08□□□□□ -0.8
TRAIP-210ENST00000489948 IGLV1-51P01701 117 aa10.08□□□□□ -0.8
TRAIP-210ENST00000489948 PYYP10082 97 aa10.08□□□□□ -0.8
TRAIP-210ENST00000489948 ATF4P18848 351 aaPredicted RBP10.08□□□□□ -0.8
TRAIP-210ENST00000489948 CD33P20138 364 aa10.08□□□□□ -0.8
TRAIP-210ENST00000489948 PPT1P50897 306 aa10.08□□□□□ -0.8
TRAIP-210ENST00000489948 RAB14P61106 215 aa10.08□□□□□ -0.8
TRAIP-210ENST00000489948 DEFB114Q30KQ6 69 aa10.08□□□□□ -0.8
TRAIP-210ENST00000489948 C9orf66Q5T8R8 295 aa10.08□□□□□ -0.8
TRAIP-210ENST00000489948 TCF24Q7RTU0 167 aa10.08□□□□□ -0.8
TRAIP-210ENST00000489948 C17orf77Q96MU5 243 aa10.08□□□□□ -0.8
TRAIP-210ENST00000489948 GPR61Q9BZJ8 451 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms