RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 LRBAP50851 2863 aa11.77□□□□□ -0.52
COL9A1-208ENST00000489611 A1L4Q6 167 aa11.77□□□□□ -0.53
COL9A1-208ENST00000489611 OVOL3O00110 214 aa11.77□□□□□ -0.53
COL9A1-208ENST00000489611 FAM162BQ5T6X4 162 aa11.77□□□□□ -0.53
COL9A1-208ENST00000489611 ASPHD1Q5U4P2 390 aa11.77□□□□□ -0.53
COL9A1-208ENST00000489611 Q86TA4 180 aa11.77□□□□□ -0.53
COL9A1-208ENST00000489611 FAM168AQ92567 244 aa11.77□□□□□ -0.53
COL9A1-208ENST00000489611 NEU1Q99519 415 aa11.77□□□□□ -0.53
COL9A1-208ENST00000489611 FAM103A1Q9BTL3 118 aaKnown RBP11.77□□□□□ -0.53
COL9A1-208ENST00000489611 SAMD10Q9BYL1 202 aa11.77□□□□□ -0.53
COL9A1-208ENST00000489611 HIGD1CA8MV81 97 aa11.76□□□□□ -0.53
COL9A1-208ENST00000489611 NPIPB6E9PJ23 425 aa11.76□□□□□ -0.53
COL9A1-208ENST00000489611 NDUFS7O75251 213 aa11.76□□□□□ -0.53
COL9A1-208ENST00000489611 OR2J3O76001 311 aa11.76□□□□□ -0.53
COL9A1-208ENST00000489611 SCGB1D1O95968 90 aa11.76□□□□□ -0.53
COL9A1-208ENST00000489611 SIGLECL1Q8N7X8 197 aa11.76□□□□□ -0.53
COL9A1-208ENST00000489611 AAMDCQ9H7C9 122 aa11.76□□□□□ -0.53
COL9A1-208ENST00000489611 GNB4Q9HAV0 340 aa11.76□□□□□ -0.53
COL9A1-208ENST00000489611 NAGKQ9UJ70 344 aa11.76□□□□□ -0.53
COL9A1-208ENST00000489611 DOPEY1Q5JWR5 2465 aa11.76□□□□□ -0.53
COL9A1-208ENST00000489611 USP9XQ93008 2570 aaPredicted RBP11.76□□□□□ -0.53
COL9A1-208ENST00000489611 BMPR1BO00238 502 aa11.76□□□□□ -0.53
COL9A1-208ENST00000489611 SPINK4O60575 86 aa11.76□□□□□ -0.53
COL9A1-208ENST00000489611 ZNF253O75346 499 aa11.76□□□□□ -0.53
COL9A1-208ENST00000489611 CD24P25063 80 aa11.76□□□□□ -0.53
COL9A1-208ENST00000489611 LMO4P61968 165 aa11.76□□□□□ -0.53
COL9A1-208ENST00000489611 PSG9Q00887 426 aa11.76□□□□□ -0.53
COL9A1-208ENST00000489611 LBHQ53QV2 105 aaPredicted RBP11.76□□□□□ -0.53
COL9A1-208ENST00000489611 Q56UQ5 140 aa11.76□□□□□ -0.53
COL9A1-208ENST00000489611 DYNAPQ8N1N2 210 aa11.76□□□□□ -0.53
COL9A1-208ENST00000489611 KCNS1Q96KK3 526 aa11.76□□□□□ -0.53
COL9A1-208ENST00000489611 SPOCK3Q9BQ16 436 aa11.76□□□□□ -0.53
COL9A1-208ENST00000489611 RPH3ALQ9UNE2 315 aa11.76□□□□□ -0.53
COL9A1-208ENST00000489611 NUPR1O60356 82 aa11.75□□□□□ -0.53
COL9A1-208ENST00000489611 CA1P00915 261 aaPredicted RBP11.75□□□□□ -0.53
COL9A1-208ENST00000489611 RAB9AP51151 201 aa11.75□□□□□ -0.53
COL9A1-208ENST00000489611 SLC35B1P78383 322 aa11.75□□□□□ -0.53
COL9A1-208ENST00000489611 C9orf152Q5JTZ5 239 aa11.75□□□□□ -0.53
COL9A1-208ENST00000489611 Q8N9W7 124 aa11.75□□□□□ -0.53
COL9A1-208ENST00000489611 FLNCQ14315 2725 aa11.75□□□□□ -0.53
COL9A1-208ENST00000489611 SPTAN1Q13813 2472 aaKnown RBP11.74□□□□□ -0.53
COL9A1-208ENST00000489611 IGHV7-81A0A0B4J1V7 117 aa11.74□□□□□ -0.53
COL9A1-208ENST00000489611 A0A1B0GXF2 115 aa11.74□□□□□ -0.53
COL9A1-208ENST00000489611 A0A1W2PRD5 423 aa11.74□□□□□ -0.53
COL9A1-208ENST00000489611 A0A1W2PRF3 423 aa11.74□□□□□ -0.53
COL9A1-208ENST00000489611 A0A1W2PRM7 423 aa11.74□□□□□ -0.53
COL9A1-208ENST00000489611 A8MWP6 167 aa11.74□□□□□ -0.53
COL9A1-208ENST00000489611 MRPS12O15235 138 aaKnown RBP11.74□□□□□ -0.53
COL9A1-208ENST00000489611 NDUFB8O95169 186 aa11.74□□□□□ -0.53
COL9A1-208ENST00000489611 GPX1P07203 203 aa11.74□□□□□ -0.53
COL9A1-208ENST00000489611 RPL7P18124 248 aaKnown RBP11.74□□□□□ -0.53
COL9A1-208ENST00000489611 SRIP30626 198 aa11.74□□□□□ -0.53
COL9A1-208ENST00000489611 LINC00310P59036 64 aa11.74□□□□□ -0.53
COL9A1-208ENST00000489611 HBBP68871 147 aa11.74□□□□□ -0.53
COL9A1-208ENST00000489611 CYB5R2Q6BCY4 276 aa11.74□□□□□ -0.53
COL9A1-208ENST00000489611 SIGLEC15Q6ZMC9 328 aa11.74□□□□□ -0.53
COL9A1-208ENST00000489611 RBPMS2Q6ZRY4 209 aaKnown RBP11.74□□□□□ -0.53
COL9A1-208ENST00000489611 REC114Q7Z4M0 266 aa11.74□□□□□ -0.53
COL9A1-208ENST00000489611 LURAP1LQ8IV03 231 aa11.74□□□□□ -0.53
COL9A1-208ENST00000489611 ZNF664Q8N3J9 261 aa11.74□□□□□ -0.53
COL9A1-208ENST00000489611 FAM110DQ8TAY7 271 aaPredicted RBP11.74□□□□□ -0.53
COL9A1-208ENST00000489611 ZNF414Q96IQ9 312 aa11.74□□□□□ -0.53
COL9A1-208ENST00000489611 TBX15Q96SF7 602 aa11.74□□□□□ -0.53
COL9A1-208ENST00000489611 FRMD6-AS1P0C7T7 363 aa11.74□□□□□ -0.53
COL9A1-208ENST00000489611 COL8A1P27658 744 aa11.74□□□□□ -0.53
COL9A1-208ENST00000489611 KLF5Q13887 457 aaPredicted RBP11.74□□□□□ -0.53
COL9A1-208ENST00000489611 FAM209BQ5JX69 171 aa11.74□□□□□ -0.53
COL9A1-208ENST00000489611 DMRTA1Q5VZB9 504 aa11.74□□□□□ -0.53
COL9A1-208ENST00000489611 GOLT1AQ6ZVE7 132 aa11.74□□□□□ -0.53
COL9A1-208ENST00000489611 BPESC1Q9GZL8 116 aa11.74□□□□□ -0.53
COL9A1-208ENST00000489611 ARHGAP32A7KAX9 2087 aa11.73□□□□□ -0.53
COL9A1-208ENST00000489611 A0A1B0GUS0 222 aa11.73□□□□□ -0.53
COL9A1-208ENST00000489611 IGLV2-11P01706 119 aa11.73□□□□□ -0.53
COL9A1-208ENST00000489611 SNRPCP09234 159 aaKnown RBP11.73□□□□□ -0.53
COL9A1-208ENST00000489611 CSN1S1P47710 185 aa11.73□□□□□ -0.53
COL9A1-208ENST00000489611 FOXA3P55318 350 aaPredicted RBP11.73□□□□□ -0.53
COL9A1-208ENST00000489611 NDPQ00604 133 aa11.73□□□□□ -0.53
COL9A1-208ENST00000489611 Q6AWC8 147 aa11.73□□□□□ -0.53
COL9A1-208ENST00000489611 F8W735 103 aaPredicted RBP11.72□□□□□ -0.53
COL9A1-208ENST00000489611 SAA4P35542 130 aa11.72□□□□□ -0.53
COL9A1-208ENST00000489611 PSG3Q16557 428 aa11.72□□□□□ -0.53
COL9A1-208ENST00000489611 KLF17Q5JT82 389 aaPredicted RBP11.72□□□□□ -0.53
COL9A1-208ENST00000489611 C1orf194Q5T5A4 169 aa11.72□□□□□ -0.53
COL9A1-208ENST00000489611 C16orf54Q6UWD8 224 aa11.72□□□□□ -0.53
COL9A1-208ENST00000489611 EXOC3-AS1Q8N2X6 119 aa11.72□□□□□ -0.53
COL9A1-208ENST00000489611 ATP6V0BQ99437 205 aa11.72□□□□□ -0.53
COL9A1-208ENST00000489611 HSPB9Q9BQS6 159 aa11.72□□□□□ -0.53
COL9A1-208ENST00000489611 MYO18BQ8IUG5 2567 aa11.72□□□□□ -0.53
COL9A1-208ENST00000489611 A0A1B0GW15 77 aa11.72□□□□□ -0.53
COL9A1-208ENST00000489611 NDUFS8O00217 210 aa11.72□□□□□ -0.53
COL9A1-208ENST00000489611 NPFFO15130 113 aa11.72□□□□□ -0.53
COL9A1-208ENST00000489611 EGR2P11161 476 aaPredicted RBP11.72□□□□□ -0.53
COL9A1-208ENST00000489611 SLAQ13239 276 aa11.72□□□□□ -0.53
COL9A1-208ENST00000489611 RABAC1Q9UI14 185 aa11.72□□□□□ -0.53
COL9A1-208ENST00000489611 FBXL7Q9UJT9 491 aa11.72□□□□□ -0.53
COL9A1-208ENST00000489611 DCHS2Q6V1P9 2916 aa11.71□□□□□ -0.53
COL9A1-208ENST00000489611 CHD6Q8TD26 2715 aa11.71□□□□□ -0.53
COL9A1-208ENST00000489611 DIRC3C9JPN6 131 aa11.71□□□□□ -0.53
COL9A1-208ENST00000489611 ZNF324O75467 553 aaPredicted RBP11.71□□□□□ -0.53
COL9A1-208ENST00000489611 Q6ZWC4 215 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms