RNA–Protein interactions for RNA: ENST00000483690.1

MCF2-207, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

TSL 3

Gene MCF2, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-207ENST00000483690 SETBP1Q9Y6X0 1596 aa2.18□□□□□ -2.06
MCF2-207ENST00000483690 BCORL1Q5H9F3 1711 aa2.17□□□□□ -2.06
MCF2-207ENST00000483690 KMT2BQ9UMN6 2715 aaPredicted RBP2.17□□□□□ -2.06
MCF2-207ENST00000483690 DHFRP00374 187 aa2.17□□□□□ -2.06
MCF2-207ENST00000483690 AKR1C8PQ5T2L2 129 aa2.17□□□□□ -2.06
MCF2-207ENST00000483690 GPER1Q99527 375 aa2.17□□□□□ -2.06
MCF2-207ENST00000483690 FANCAO15360 1455 aa2.17□□□□□ -2.06
MCF2-207ENST00000483690 WDR7Q9Y4E6 1490 aa2.17□□□□□ -2.06
MCF2-207ENST00000483690 MAP3K4Q9Y6R4 1608 aa2.17□□□□□ -2.06
MCF2-207ENST00000483690 TRAPPC8Q9Y2L5 1435 aa2.17□□□□□ -2.06
MCF2-207ENST00000483690 H7C1C5 153 aa2.16□□□□□ -2.06
MCF2-207ENST00000483690 TMEM256-PLSCR3K7ERE1 68 aa2.16□□□□□ -2.06
MCF2-207ENST00000483690 IFNA1P01562 189 aa2.16□□□□□ -2.06
MCF2-207ENST00000483690 LCN6P62502 163 aa2.16□□□□□ -2.06
MCF2-207ENST00000483690 SCGB2B2Q4G0G5 96 aa2.16□□□□□ -2.06
MCF2-207ENST00000483690 EXOC3-AS1Q8N2X6 119 aa2.16□□□□□ -2.06
MCF2-207ENST00000483690 ZFP30Q9Y2G7 519 aa2.16□□□□□ -2.06
MCF2-207ENST00000483690 PBRM1Q86U86 1689 aa2.15□□□□□ -2.06
MCF2-207ENST00000483690 UHRF1BP1LA0JNW5 1464 aa2.15□□□□□ -2.06
MCF2-207ENST00000483690 SHANK2Q9UPX8 1470 aa2.15□□□□□ -2.06
MCF2-207ENST00000483690 DUXBA0A1W2PPF3 345 aa2.15□□□□□ -2.07
MCF2-207ENST00000483690 ZNF736B4DX44 427 aaPredicted RBP2.15□□□□□ -2.07
MCF2-207ENST00000483690 PHBP35232 272 aa2.15□□□□□ -2.07
MCF2-207ENST00000483690 EIF5AL1Q6IS14 154 aaKnown RBP2.15□□□□□ -2.07
MCF2-207ENST00000483690 DEFB132Q7Z7B7 95 aa2.15□□□□□ -2.07
MCF2-207ENST00000483690 OR10K1Q8NGX5 313 aa2.15□□□□□ -2.07
MCF2-207ENST00000483690 OR13C6PQ8NH95 151 aa2.15□□□□□ -2.07
MCF2-207ENST00000483690 TEX37Q96LM6 180 aa2.15□□□□□ -2.07
MCF2-207ENST00000483690 SSR3Q9UNL2 185 aa2.15□□□□□ -2.07
MCF2-207ENST00000483690 ABCA10Q8WWZ4 1543 aa2.15□□□□□ -2.07
MCF2-207ENST00000483690 KIAA0556O60303 1618 aa2.14□□□□□ -2.07
MCF2-207ENST00000483690 ABCA5Q8WWZ7 1642 aa2.14□□□□□ -2.07
MCF2-207ENST00000483690 CPS1P31327 1500 aa2.14□□□□□ -2.07
MCF2-207ENST00000483690 M0R2N4 97 aa2.14□□□□□ -2.07
MCF2-207ENST00000483690 NFYBP25208 207 aa2.14□□□□□ -2.07
MCF2-207ENST00000483690 LINC00526Q96FQ7 95 aa2.14□□□□□ -2.07
MCF2-207ENST00000483690 OBSCN-AS1Q96MR7 158 aa2.14□□□□□ -2.07
MCF2-207ENST00000483690 NPCDR1Q9BY65 106 aa2.14□□□□□ -2.07
MCF2-207ENST00000483690 LYRM2Q9NU23 88 aaPredicted RBP2.14□□□□□ -2.07
MCF2-207ENST00000483690 PCTPQ9UKL6 214 aa2.14□□□□□ -2.07
MCF2-207ENST00000483690 NCOA6Q14686 2063 aaPredicted RBP2.14□□□□□ -2.07
MCF2-207ENST00000483690 ADAMTS12P58397 1594 aa2.14□□□□□ -2.07
MCF2-207ENST00000483690 DOCK4Q8N1I0 1966 aa2.14□□□□□ -2.07
MCF2-207ENST00000483690 TNRC6AQ8NDV7 1962 aaKnown RBP2.14□□□□□ -2.07
MCF2-207ENST00000483690 SRCAPQ6ZRS2 3230 aa2.13□□□□□ -2.07
MCF2-207ENST00000483690 EIF3AQ14152 1382 aaKnown RBP2.13□□□□□ -2.07
MCF2-207ENST00000483690 PREX1Q8TCU6 1659 aa2.13□□□□□ -2.07
MCF2-207ENST00000483690 POU6F1Q14863 301 aa2.13□□□□□ -2.07
MCF2-207ENST00000483690 PBDC1Q9BVG4 233 aa2.13□□□□□ -2.07
MCF2-207ENST00000483690 SH3BGRL3Q9H299 93 aa2.13□□□□□ -2.07
MCF2-207ENST00000483690 CDC42SE1Q9NRR8 79 aa2.13□□□□□ -2.07
MCF2-207ENST00000483690 C22orf24Q9Y442 160 aa2.13□□□□□ -2.07
MCF2-207ENST00000483690 LY96Q9Y6Y9 160 aa2.13□□□□□ -2.07
MCF2-207ENST00000483690 FAM135BQ49AJ0 1406 aa2.13□□□□□ -2.07
MCF2-207ENST00000483690 CDK12Q9NYV4 1490 aaPredicted RBP2.13□□□□□ -2.07
MCF2-207ENST00000483690 LRRC7Q96NW7 1537 aa2.12□□□□□ -2.07
MCF2-207ENST00000483690 TTC37Q6PGP7 1564 aa2.12□□□□□ -2.07
MCF2-207ENST00000483690 TCRBV4S1A1TA0A5B7 111 aa2.12□□□□□ -2.07
MCF2-207ENST00000483690 DYNLT3P51808 116 aa2.12□□□□□ -2.07
MCF2-207ENST00000483690 DR1Q01658 176 aa2.12□□□□□ -2.07
MCF2-207ENST00000483690 ST6GALNAC3Q8NDV1 305 aa2.12□□□□□ -2.07
MCF2-207ENST00000483690 GINS3Q9BRX5 216 aa2.12□□□□□ -2.07
MCF2-207ENST00000483690 CUL7Q14999 1698 aa2.12□□□□□ -2.07
MCF2-207ENST00000483690 UBR2Q8IWV8 1755 aa2.11□□□□□ -2.07
MCF2-207ENST00000483690 BIVM-ERCC5R4GMW8 1640 aa2.11□□□□□ -2.07
MCF2-207ENST00000483690 HLA-EP13747 358 aa2.11□□□□□ -2.07
MCF2-207ENST00000483690 GTF2A1P52655 376 aaPredicted RBP2.11□□□□□ -2.07
MCF2-207ENST00000483690 B2MP61769 119 aa2.11□□□□□ -2.07
MCF2-207ENST00000483690 TMEM70Q9BUB7 260 aa2.11□□□□□ -2.07
MCF2-207ENST00000483690 OR2J1Q9GZK6 312 aa2.11□□□□□ -2.07
MCF2-207ENST00000483690 SS18L2Q9UHA2 77 aa2.11□□□□□ -2.07
MCF2-207ENST00000483690 ATPIF1Q9UII2 106 aa2.11□□□□□ -2.07
MCF2-207ENST00000483690 RAPGEF2Q9Y4G8 1499 aa2.11□□□□□ -2.07
MCF2-207ENST00000483690 ZFYVE16Q7Z3T8 1539 aa2.11□□□□□ -2.07
MCF2-207ENST00000483690 ARHGEF12Q9NZN5 1544 aa2.11□□□□□ -2.07
MCF2-207ENST00000483690 TCOF1Q13428 1488 aaKnown RBP2.1□□□□□ -2.07
MCF2-207ENST00000483690 MAGI2Q86UL8 1455 aa2.1□□□□□ -2.07
MCF2-207ENST00000483690 RIIAD1A6NNX1 92 aa2.1□□□□□ -2.07
MCF2-207ENST00000483690 INE1O15225 51 aa2.1□□□□□ -2.07
MCF2-207ENST00000483690 APOA2P02652 100 aa2.1□□□□□ -2.07
MCF2-207ENST00000483690 ARPC4P59998 168 aa2.1□□□□□ -2.07
MCF2-207ENST00000483690 DEFB115Q30KQ5 88 aa2.1□□□□□ -2.07
MCF2-207ENST00000483690 GDF5OSQ5U4N7 250 aa2.1□□□□□ -2.07
MCF2-207ENST00000483690 LYSMD1Q96S90 227 aa2.1□□□□□ -2.07
MCF2-207ENST00000483690 CHCHD2Q9Y6H1 151 aaPredicted RBP2.1□□□□□ -2.07
MCF2-207ENST00000483690 ERICH3Q5RHP9 1530 aa2.1□□□□□ -2.07
MCF2-207ENST00000483690 ZCCHC11Q5TAX3 1644 aaKnown RBP2.09□□□□□ -2.07
MCF2-207ENST00000483690 ALKQ9UM73 1620 aa2.09□□□□□ -2.07
MCF2-207ENST00000483690 BLMP54132 1417 aaPredicted RBP2.09□□□□□ -2.07
MCF2-207ENST00000483690 SCAPERQ9BY12 1400 aa2.09□□□□□ -2.07
MCF2-207ENST00000483690 EFCAB5A4FU69 1503 aa2.09□□□□□ -2.07
MCF2-207ENST00000483690 ROMO1P60602 79 aa2.09□□□□□ -2.07
MCF2-207ENST00000483690 SNCBQ16143 134 aa2.09□□□□□ -2.07
MCF2-207ENST00000483690 MPV17LQ2QL34 196 aa2.09□□□□□ -2.07
MCF2-207ENST00000483690 FAM74A1Q5RGS3 127 aa2.09□□□□□ -2.07
MCF2-207ENST00000483690 LYG2Q86SG7 212 aa2.09□□□□□ -2.07
MCF2-207ENST00000483690 IFT20Q8IY31 132 aa2.09□□□□□ -2.07
MCF2-207ENST00000483690 PBOV1Q9GZY1 135 aa2.09□□□□□ -2.07
MCF2-207ENST00000483690 FBN3Q75N90 2809 aa2.09□□□□□ -2.07
MCF2-207ENST00000483690 CNTLNQ9NXG0 1405 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms