RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 RNF223E7ERA6 249 aa10.3□□□□□ -0.76
CPNE1-225ENST00000483495 H3BTX0 84 aa10.3□□□□□ -0.76
CPNE1-225ENST00000483495 TCRAP04437 139 aa10.3□□□□□ -0.76
CPNE1-225ENST00000483495 LY6EQ16553 131 aa10.3□□□□□ -0.76
CPNE1-225ENST00000483495 BAGE2Q86Y30 109 aa10.3□□□□□ -0.76
CPNE1-225ENST00000483495 FRZBQ92765 325 aa10.3□□□□□ -0.76
CPNE1-225ENST00000483495 EEF1AKMT3Q96AZ1 226 aa10.3□□□□□ -0.76
CPNE1-225ENST00000483495 MBD6Q96DN6 1003 aa10.3□□□□□ -0.76
CPNE1-225ENST00000483495 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.29□□□□□ -0.769e-8■■■■□ 20.7
CPNE1-225ENST00000483495 TRAV34A0A0B4J273 112 aa10.29□□□□□ -0.76
CPNE1-225ENST00000483495 FAM223BA6NKX1 122 aa10.29□□□□□ -0.76
CPNE1-225ENST00000483495 TGFAP01135 160 aa10.29□□□□□ -0.76
CPNE1-225ENST00000483495 CLEC3BP05452 202 aa10.29□□□□□ -0.76
CPNE1-225ENST00000483495 IGHV4-31P0DP07 118 aa10.29□□□□□ -0.76
CPNE1-225ENST00000483495 GPR183P32249 361 aa10.29□□□□□ -0.76
CPNE1-225ENST00000483495 PDE6HQ13956 83 aa10.29□□□□□ -0.76
CPNE1-225ENST00000483495 FAM231DQ6ZW35 169 aa10.29□□□□□ -0.76
CPNE1-225ENST00000483495 FAM223AQ8IWN6 122 aa10.29□□□□□ -0.76
CPNE1-225ENST00000483495 FMC1Q96HJ9 113 aa10.29□□□□□ -0.76
CPNE1-225ENST00000483495 CSMD1Q96PZ7 3565 aa10.29□□□□□ -0.76
CPNE1-225ENST00000483495 H3BUA1 57 aa10.28□□□□□ -0.76
CPNE1-225ENST00000483495 BMPR1BO00238 502 aa10.28□□□□□ -0.76
CPNE1-225ENST00000483495 SLC17A3O00476 420 aa10.28□□□□□ -0.76
CPNE1-225ENST00000483495 FSHBP01225 129 aa10.28□□□□□ -0.76
CPNE1-225ENST00000483495 TRGC1P0CF51 173 aa10.28□□□□□ -0.76
CPNE1-225ENST00000483495 S100A7P31151 101 aa10.28□□□□□ -0.76
CPNE1-225ENST00000483495 MEOX2P50222 304 aa10.28□□□□□ -0.76
CPNE1-225ENST00000483495 UBE2G1P62253 170 aa10.28□□□□□ -0.76
CPNE1-225ENST00000483495 Q5PR19 223 aa10.28□□□□□ -0.76
CPNE1-225ENST00000483495 PRSS57Q6UWY2 283 aa10.28□□□□□ -0.76
CPNE1-225ENST00000483495 SIGLEC15Q6ZMC9 328 aa10.28□□□□□ -0.76
CPNE1-225ENST00000483495 C12orf57Q99622 126 aa10.28□□□□□ -0.76
CPNE1-225ENST00000483495 MLST8Q9BVC4 326 aa10.28□□□□□ -0.76
CPNE1-225ENST00000483495 RNASE7Q9H1E1 156 aaKnown RBP10.28□□□□□ -0.76
CPNE1-225ENST00000483495 ZFAND3Q9H8U3 227 aa10.28□□□□□ -0.76
CPNE1-225ENST00000483495 RABAC1Q9UI14 185 aa10.28□□□□□ -0.76
CPNE1-225ENST00000483495 TRBV6-1A0A0K0K1D8 114 aa10.27□□□□□ -0.76
CPNE1-225ENST00000483495 MGST1P10620 155 aaKnown RBP10.27□□□□□ -0.76
CPNE1-225ENST00000483495 HOXA5P20719 270 aa10.27□□□□□ -0.76
CPNE1-225ENST00000483495 PPIFP30405 207 aaKnown RBP10.27□□□□□ -0.76
CPNE1-225ENST00000483495 ATP5G2Q06055 141 aa10.27□□□□□ -0.76
CPNE1-225ENST00000483495 IBA57Q5T440 356 aaKnown RBP10.27□□□□□ -0.76
CPNE1-225ENST00000483495 TOMM20LQ6UXN7 152 aa10.27□□□□□ -0.76
CPNE1-225ENST00000483495 MAPK1IP1LQ8NDC0 245 aa10.27□□□□□ -0.76
CPNE1-225ENST00000483495 C17orf77Q96MU5 243 aa10.27□□□□□ -0.76
CPNE1-225ENST00000483495 GPR82Q96P67 336 aa10.27□□□□□ -0.76
CPNE1-225ENST00000483495 MS4A10Q96PG2 267 aa10.27□□□□□ -0.76
CPNE1-225ENST00000483495 USP9YO00507 2555 aaPredicted RBP10.27□□□□□ -0.76
CPNE1-225ENST00000483495 ZNF320A2RRD8 509 aa10.27□□□□□ -0.77
CPNE1-225ENST00000483495 LTAP01374 205 aa10.27□□□□□ -0.77
CPNE1-225ENST00000483495 PLA2G2AP14555 144 aa10.27□□□□□ -0.77
CPNE1-225ENST00000483495 RPL7P18124 248 aaKnown RBP10.27□□□□□ -0.77
CPNE1-225ENST00000483495 NDUFA6P56556 154 aa10.27□□□□□ -0.77
CPNE1-225ENST00000483495 RPL15P61313 204 aaKnown RBP10.27□□□□□ -0.77
CPNE1-225ENST00000483495 RPEL1Q2QD12 228 aa10.27□□□□□ -0.77
CPNE1-225ENST00000483495 C9orf152Q5JTZ5 239 aa10.27□□□□□ -0.77
CPNE1-225ENST00000483495 ACTL10Q5JWF8 245 aa10.27□□□□□ -0.77
CPNE1-225ENST00000483495 EXOC3-AS1Q8N2X6 119 aa10.27□□□□□ -0.77
CPNE1-225ENST00000483495 ZNF580Q9UK33 172 aa10.27□□□□□ -0.77
CPNE1-225ENST00000483495 PTPN13Q12923 2485 aa10.27□□□□□ -0.77
CPNE1-225ENST00000483495 ANKRD17O75179 2603 aaKnown RBP10.27□□□□□ -0.77
CPNE1-225ENST00000483495 SMIM6P0DI80 62 aa10.26□□□□□ -0.77
CPNE1-225ENST00000483495 CDX1P47902 265 aaPredicted RBP10.26□□□□□ -0.77
CPNE1-225ENST00000483495 DEFB112Q30KQ8 113 aa10.26□□□□□ -0.77
CPNE1-225ENST00000483495 CLEC19AQ6UXS0 136 aa10.26□□□□□ -0.77
CPNE1-225ENST00000483495 C9orf139Q6ZV77 190 aa10.26□□□□□ -0.77
CPNE1-225ENST00000483495 KRTAP1-3Q8IUG1 177 aa10.26□□□□□ -0.77
CPNE1-225ENST00000483495 NHLRC2Q8NBF2 726 aa10.26□□□□□ -0.77
CPNE1-225ENST00000483495 CMTM2Q8TAZ6 248 aa10.26□□□□□ -0.77
CPNE1-225ENST00000483495 LINC00527Q9UJ94 153 aa10.26□□□□□ -0.77
CPNE1-225ENST00000483495 KMT2BQ9UMN6 2715 aaPredicted RBP10.25□□□□□ -0.77
CPNE1-225ENST00000483495 IGLV2-11P01706 119 aa10.25□□□□□ -0.77
CPNE1-225ENST00000483495 RAB9AP51151 201 aa10.25□□□□□ -0.77
CPNE1-225ENST00000483495 BLCAPP62952 87 aa10.25□□□□□ -0.77
CPNE1-225ENST00000483495 CSMD2Q7Z408 3487 aa10.25□□□□□ -0.77
CPNE1-225ENST00000483495 SMIM27A0A1W2PRY6 76 aa10.25□□□□□ -0.77
CPNE1-225ENST00000483495 CLPSL1A2RUU4 121 aa10.25□□□□□ -0.77
CPNE1-225ENST00000483495 TRGV3P03979 118 aa10.25□□□□□ -0.77
CPNE1-225ENST00000483495 IER3P46695 156 aa10.25□□□□□ -0.77
CPNE1-225ENST00000483495 RELQ04864 619 aaPredicted RBP10.25□□□□□ -0.77
CPNE1-225ENST00000483495 ARL6IP6Q8N6S5 226 aa10.25□□□□□ -0.77
CPNE1-225ENST00000483495 RPH3ALQ9UNE2 315 aa10.25□□□□□ -0.77
CPNE1-225ENST00000483495 J3QKU1 62 aa10.24□□□□□ -0.77
CPNE1-225ENST00000483495 ZNF253O75346 499 aa10.24□□□□□ -0.77
CPNE1-225ENST00000483495 Q86TA4 180 aa10.24□□□□□ -0.77
CPNE1-225ENST00000483495 TMEM75Q8N9X5 138 aa10.24□□□□□ -0.77
CPNE1-225ENST00000483495 USMG5Q96IX5 58 aa10.24□□□□□ -0.77
CPNE1-225ENST00000483495 PSMG3-AS1Q96PY0 264 aa10.24□□□□□ -0.77
CPNE1-225ENST00000483495 POLQO75417 2590 aa10.24□□□□□ -0.77
CPNE1-225ENST00000483495 CELSR1Q9NYQ6 3014 aa10.24□□□□□ -0.77
CPNE1-225ENST00000483495 IGHV3-35A0A0C4DH35 117 aa10.23□□□□□ -0.77
CPNE1-225ENST00000483495 ZNF705GA8MUZ8 300 aaPredicted RBP10.23□□□□□ -0.77
CPNE1-225ENST00000483495 BUB3O43684 328 aa10.23□□□□□ -0.77
CPNE1-225ENST00000483495 IGLV1-40P01703 118 aa10.23□□□□□ -0.77
CPNE1-225ENST00000483495 IGHV4-59P01825 116 aa10.23□□□□□ -0.77
CPNE1-225ENST00000483495 PSG9Q00887 426 aa10.23□□□□□ -0.77
CPNE1-225ENST00000483495 CFHR3Q02985 330 aa10.23□□□□□ -0.77
CPNE1-225ENST00000483495 Q6ZS46 218 aa10.23□□□□□ -0.77
CPNE1-225ENST00000483495 GOLT1AQ6ZVE7 132 aa10.23□□□□□ -0.77
CPNE1-225ENST00000483495 OR8I2Q8N0Y5 310 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms