RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 MIC13Q5XKP0 118 aa9.18□□□□□ -0.94
PTPRF-213ENST00000481019 LCN12Q6JVE5 192 aa9.18□□□□□ -0.94
PTPRF-213ENST00000481019 TOMM20LQ6UXN7 152 aa9.18□□□□□ -0.94
PTPRF-213ENST00000481019 STXBP6Q8NFX7 210 aa9.18□□□□□ -0.94
PTPRF-213ENST00000481019 OR51G1Q8NGK1 321 aa9.18□□□□□ -0.94
PTPRF-213ENST00000481019 MRPL32Q9BYC8 188 aaKnown RBP9.18□□□□□ -0.94
PTPRF-213ENST00000481019 ZFAND3Q9H8U3 227 aa9.18□□□□□ -0.94
PTPRF-213ENST00000481019 RPRMQ9NS64 109 aa9.18□□□□□ -0.94
PTPRF-213ENST00000481019 SMAD5-AS1Q9Y6J3 95 aa9.18□□□□□ -0.94
PTPRF-213ENST00000481019 NBEAL2Q6ZNJ1 2754 aa9.18□□□□□ -0.94
PTPRF-213ENST00000481019 STAB2Q8WWQ8 2551 aa9.17□□□□□ -0.94
PTPRF-213ENST00000481019 IGKV1OR2-108A0A075B7D4 117 aa9.17□□□□□ -0.94
PTPRF-213ENST00000481019 IGHV3OR16-13A0A075B7E8 117 aa9.17□□□□□ -0.94
PTPRF-213ENST00000481019 IGHV3-74A0A0B4J1X5 117 aa9.17□□□□□ -0.94
PTPRF-213ENST00000481019 TRAV1-1A0A0B4J248 108 aa9.17□□□□□ -0.94
PTPRF-213ENST00000481019 LINC00862A6NCI5 91 aa9.17□□□□□ -0.94
PTPRF-213ENST00000481019 COX7A2P2O60397 106 aa9.17□□□□□ -0.94
PTPRF-213ENST00000481019 HYPMO75409 117 aa9.17□□□□□ -0.94
PTPRF-213ENST00000481019 YIF1AO95070 293 aa9.17□□□□□ -0.94
PTPRF-213ENST00000481019 LINC00869P0C866 280 aa9.17□□□□□ -0.94
PTPRF-213ENST00000481019 IGHV4-30-4P0DP06 118 aa9.17□□□□□ -0.94
PTPRF-213ENST00000481019 TAGLN2P37802 199 aaKnown RBP9.17□□□□□ -0.94
PTPRF-213ENST00000481019 CDC34P49427 236 aaPredicted RBP9.17□□□□□ -0.94
PTPRF-213ENST00000481019 PLP1P60201 277 aa9.17□□□□□ -0.94
PTPRF-213ENST00000481019 GUCA2BQ16661 112 aa9.17□□□□□ -0.94
PTPRF-213ENST00000481019 ZNF600Q6ZNG1 722 aa9.17□□□□□ -0.94
PTPRF-213ENST00000481019 OR2K2Q8NGT1 345 aa9.17□□□□□ -0.94
PTPRF-213ENST00000481019 SFT2D1Q8WV19 159 aa9.17□□□□□ -0.94
PTPRF-213ENST00000481019 MBD3L1Q8WWY6 194 aa9.17□□□□□ -0.94
PTPRF-213ENST00000481019 DAZ1Q9NQZ3 744 aaKnown RBP9.17□□□□□ -0.94
PTPRF-213ENST00000481019 TECRQ9NZ01 308 aaKnown RBP9.17□□□□□ -0.94
PTPRF-213ENST00000481019 MRPL27Q9P0M9 148 aaKnown RBP9.17□□□□□ -0.94
PTPRF-213ENST00000481019 PUS1Q9Y606 427 aaKnown RBP eCLIP9.17□□□□□ -0.94
PTPRF-213ENST00000481019 IGKV1D-37A0A075B6S9 117 aa9.16□□□□□ -0.94
PTPRF-213ENST00000481019 K7EMT4 169 aa9.16□□□□□ -0.94
PTPRF-213ENST00000481019 FRMD6-AS1P0C7T7 363 aa9.16□□□□□ -0.94
PTPRF-213ENST00000481019 C10orf113Q5VZT2 155 aa9.16□□□□□ -0.94
PTPRF-213ENST00000481019 SBSPONQ8IVN8 264 aa9.16□□□□□ -0.94
PTPRF-213ENST00000481019 MARC2Q969Z3 335 aa9.16□□□□□ -0.94
PTPRF-213ENST00000481019 PBDC1Q9BVG4 233 aa9.16□□□□□ -0.94
PTPRF-213ENST00000481019 C19orf73Q9NVV2 129 aa9.16□□□□□ -0.94
PTPRF-213ENST00000481019 SMPXQ9UHP9 88 aa9.16□□□□□ -0.94
PTPRF-213ENST00000481019 IGHV3-66A0A0C4DH42 116 aa9.15□□□□□ -0.94
PTPRF-213ENST00000481019 IGHV7-4-1A0A0J9YVY3 117 aa9.15□□□□□ -0.94
PTPRF-213ENST00000481019 RAB19A4D1S5 217 aa9.15□□□□□ -0.94
PTPRF-213ENST00000481019 CHEK1O14757 476 aa9.15□□□□□ -0.94
PTPRF-213ENST00000481019 IFNA1P01562 189 aa9.15□□□□□ -0.94
PTPRF-213ENST00000481019 PSG1P11464 419 aa9.15□□□□□ -0.94
PTPRF-213ENST00000481019 CD81P60033 236 aa9.15□□□□□ -0.94
PTPRF-213ENST00000481019 ZNF90Q03938 601 aa9.15□□□□□ -0.94
PTPRF-213ENST00000481019 PMS2P11Q13670 270 aa9.15□□□□□ -0.94
PTPRF-213ENST00000481019 FAM78BQ5VT40 261 aa9.15□□□□□ -0.94
PTPRF-213ENST00000481019 FAM122CQ6P4D5 195 aa9.15□□□□□ -0.94
PTPRF-213ENST00000481019 PQLC2Q6ZP29 291 aa9.15□□□□□ -0.94
PTPRF-213ENST00000481019 RPP25LQ8N5L8 163 aaKnown RBP9.15□□□□□ -0.94
PTPRF-213ENST00000481019 DEFB125Q8N687 156 aa9.15□□□□□ -0.94
PTPRF-213ENST00000481019 LYPD6BQ8NI32 183 aa9.15□□□□□ -0.94
PTPRF-213ENST00000481019 HRH4Q9H3N8 390 aa9.15□□□□□ -0.94
PTPRF-213ENST00000481019 SMDT1Q9H4I9 107 aa9.15□□□□□ -0.94
PTPRF-213ENST00000481019 CXorf1O96002 111 aa9.14□□□□□ -0.95
PTPRF-213ENST00000481019 OR5G3P0C626 314 aa9.14□□□□□ -0.95
PTPRF-213ENST00000481019 ORM2P19652 201 aa9.14□□□□□ -0.95
PTPRF-213ENST00000481019 PSMB3P49720 205 aa9.14□□□□□ -0.95
PTPRF-213ENST00000481019 KHDC3LQ587J8 217 aa9.14□□□□□ -0.95
PTPRF-213ENST00000481019 OR1B1Q8NGR6 318 aa9.14□□□□□ -0.95
PTPRF-213ENST00000481019 RAB24Q969Q5 203 aa9.14□□□□□ -0.95
PTPRF-213ENST00000481019 NARS2Q96I59 477 aaKnown RBP9.14□□□□□ -0.95
PTPRF-213ENST00000481019 RHPN1-AS1Q9BWJ2 59 aa9.14□□□□□ -0.95
PTPRF-213ENST00000481019 FUT9Q9Y231 359 aa9.14□□□□□ -0.95
PTPRF-213ENST00000481019 HIGD1AQ9Y241 93 aa9.14□□□□□ -0.95
PTPRF-213ENST00000481019 MAP1LC3B2A6NCE7 125 aa9.13□□□□□ -0.95
PTPRF-213ENST00000481019 LYZP61626 148 aa9.13□□□□□ -0.95
PTPRF-213ENST00000481019 FAM90A2PQ658T7 463 aa9.13□□□□□ -0.95
PTPRF-213ENST00000481019 UQCC3Q6UW78 93 aa9.13□□□□□ -0.95
PTPRF-213ENST00000481019 SUN5Q8TC36 379 aa9.13□□□□□ -0.95
PTPRF-213ENST00000481019 RNF125Q96EQ8 232 aa9.13□□□□□ -0.95
PTPRF-213ENST00000481019 CITED4Q96RK1 184 aa9.13□□□□□ -0.95
PTPRF-213ENST00000481019 TXNDC17Q9BRA2 123 aa9.13□□□□□ -0.95
PTPRF-213ENST00000481019 MAP1LC3BQ9GZQ8 125 aa9.13□□□□□ -0.95
PTPRF-213ENST00000481019 TMEM167BQ9NRX6 74 aa9.13□□□□□ -0.95
PTPRF-213ENST00000481019 PLA2G2EQ9NZK7 142 aa9.13□□□□□ -0.95
PTPRF-213ENST00000481019 RBMY1BA6NDE4 496 aaKnown RBP9.12□□□□□ -0.95
PTPRF-213ENST00000481019 RBMY1EA6NEQ0 496 aaKnown RBP9.12□□□□□ -0.95
PTPRF-213ENST00000481019 A8MZ25 164 aa9.12□□□□□ -0.95
PTPRF-213ENST00000481019 TSPAN4O14817 238 aa9.12□□□□□ -0.95
PTPRF-213ENST00000481019 IL4P05112 153 aa9.12□□□□□ -0.95
PTPRF-213ENST00000481019 RBMY1DP0C7P1 496 aaKnown RBP9.12□□□□□ -0.95
PTPRF-213ENST00000481019 STAG3L2P0CL84 134 aa9.12□□□□□ -0.95
PTPRF-213ENST00000481019 STAG3L3P0CL85 134 aa9.12□□□□□ -0.95
PTPRF-213ENST00000481019 GATA2P23769 480 aaPredicted RBP9.12□□□□□ -0.95
PTPRF-213ENST00000481019 BMI1P35226 326 aa9.12□□□□□ -0.95
PTPRF-213ENST00000481019 FHITP49789 147 aa9.12□□□□□ -0.95
PTPRF-213ENST00000481019 PEA15Q15121 130 aa9.12□□□□□ -0.95
PTPRF-213ENST00000481019 USF2Q15853 346 aaPredicted RBP9.12□□□□□ -0.95
PTPRF-213ENST00000481019 LCN15Q6UWW0 184 aa9.12□□□□□ -0.95
PTPRF-213ENST00000481019 LINC00322Q6ZN03 302 aaPredicted RBP9.12□□□□□ -0.95
PTPRF-213ENST00000481019 RBPMS2Q6ZRY4 209 aaKnown RBP9.12□□□□□ -0.95
PTPRF-213ENST00000481019 LINC00305Q7Z4B0 112 aa9.12□□□□□ -0.95
PTPRF-213ENST00000481019 GTSCR1Q86UQ5 136 aa9.12□□□□□ -0.95
PTPRF-213ENST00000481019 EIF4E3Q8N5X7 224 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms