RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 ZNF98A6NK75 572 aa11.8□□□□□ -0.52
HMGN1-212ENST00000479586 ANKRD65E5RJM6 399 aa11.8□□□□□ -0.52
HMGN1-212ENST00000479586 ADAP1O75689 374 aa11.8□□□□□ -0.52
HMGN1-212ENST00000479586 B3GALNT1O75752 331 aa11.8□□□□□ -0.52
HMGN1-212ENST00000479586 CD3DP04234 171 aa11.8□□□□□ -0.52
HMGN1-212ENST00000479586 HIST1H1AQ02539 215 aaPredicted RBP11.8□□□□□ -0.52
HMGN1-212ENST00000479586 SERTAD4-AS1Q5TG53 156 aa11.8□□□□□ -0.52
HMGN1-212ENST00000479586 LGI3Q8N145 548 aa11.8□□□□□ -0.52
HMGN1-212ENST00000479586 ZFAND1Q8TCF1 268 aa11.8□□□□□ -0.52
HMGN1-212ENST00000479586 VSIG2Q96IQ7 327 aa11.8□□□□□ -0.52
HMGN1-212ENST00000479586 TMPRSS5Q9H3S3 457 aa11.8□□□□□ -0.52
HMGN1-212ENST00000479586 U3KQ87 197 aa11.8□□□□□ -0.52
HMGN1-212ENST00000479586 DNAH8Q96JB1 4490 aa11.8□□□□□ -0.52
HMGN1-212ENST00000479586 IGKV1OR2-108A0A075B7D4 117 aa11.79□□□□□ -0.52
HMGN1-212ENST00000479586 GABARAPH6UMI1 98 aa11.79□□□□□ -0.52
HMGN1-212ENST00000479586 NXPH4O95158 308 aa11.79□□□□□ -0.52
HMGN1-212ENST00000479586 GABARAPO95166 117 aa11.79□□□□□ -0.52
HMGN1-212ENST00000479586 FGL1Q08830 312 aa11.79□□□□□ -0.52
HMGN1-212ENST00000479586 TMEM268Q5VZI3 342 aa11.79□□□□□ -0.52
HMGN1-212ENST00000479586 SYT8Q8NBV8 401 aa11.79□□□□□ -0.52
HMGN1-212ENST00000479586 OR4D10Q8NGI6 311 aa11.79□□□□□ -0.52
HMGN1-212ENST00000479586 MARCH1Q8TCQ1 289 aa11.79□□□□□ -0.52
HMGN1-212ENST00000479586 TRGV9Q99603 122 aa11.79□□□□□ -0.52
HMGN1-212ENST00000479586 PPP1R14DQ9NXH3 145 aa11.79□□□□□ -0.52
HMGN1-212ENST00000479586 TEX13DA0A0J9YY54 714 aaPredicted RBP11.78□□□□□ -0.52
HMGN1-212ENST00000479586 SMIM31A0A1B0GVY4 71 aa11.78□□□□□ -0.52
HMGN1-212ENST00000479586 RLN2P04090 185 aa11.78□□□□□ -0.52
HMGN1-212ENST00000479586 GPX4P36969 197 aaPredicted RBP11.78□□□□□ -0.52
HMGN1-212ENST00000479586 NFE4Q86UQ8 179 aa11.78□□□□□ -0.52
HMGN1-212ENST00000479586 OR8A1Q8NGG7 326 aa11.78□□□□□ -0.52
HMGN1-212ENST00000479586 OR1B1Q8NGR6 318 aa11.78□□□□□ -0.52
HMGN1-212ENST00000479586 DTD1Q8TEA8 209 aa11.78□□□□□ -0.52
HMGN1-212ENST00000479586 SULT1A3P0DMM9 295 aa11.77□□□□□ -0.53
HMGN1-212ENST00000479586 SULT1A4P0DMN0 295 aa11.77□□□□□ -0.53
HMGN1-212ENST00000479586 OR4D5Q8NGN0 318 aa11.77□□□□□ -0.53
HMGN1-212ENST00000479586 TERB2Q8NHR7 220 aa11.77□□□□□ -0.53
HMGN1-212ENST00000479586 TMEM70Q9BUB7 260 aa11.77□□□□□ -0.53
HMGN1-212ENST00000479586 RBKSQ9H477 322 aa11.77□□□□□ -0.53
HMGN1-212ENST00000479586 NAA60Q9H7X0 242 aa11.77□□□□□ -0.53
HMGN1-212ENST00000479586 COMMD3Q9UBI1 195 aa11.77□□□□□ -0.53
HMGN1-212ENST00000479586 H7BYZ3 331 aa11.76□□□□□ -0.53
HMGN1-212ENST00000479586 KIR3DS1Q14943 382 aa11.76□□□□□ -0.53
HMGN1-212ENST00000479586 NEDD8Q15843 81 aa11.76□□□□□ -0.53
HMGN1-212ENST00000479586 SCGB2B2Q4G0G5 96 aa11.76□□□□□ -0.53
HMGN1-212ENST00000479586 TMED4Q7Z7H5 227 aa11.76□□□□□ -0.53
HMGN1-212ENST00000479586 VCX3BQ9H321 246 aa11.76□□□□□ -0.53
HMGN1-212ENST00000479586 TNFAIP8O95379 198 aa11.75□□□□□ -0.53
HMGN1-212ENST00000479586 APOA1P02647 267 aa11.75□□□□□ -0.53
HMGN1-212ENST00000479586 CDKN1BP46527 198 aa11.75□□□□□ -0.53
HMGN1-212ENST00000479586 THAP8Q8NA92 274 aa11.75□□□□□ -0.53
HMGN1-212ENST00000479586 GPR82Q96P67 336 aa11.75□□□□□ -0.53
HMGN1-212ENST00000479586 RTBDNQ9BSG5 229 aaPredicted RBP11.75□□□□□ -0.53
HMGN1-212ENST00000479586 PRR13Q9NZ81 148 aa11.75□□□□□ -0.53
HMGN1-212ENST00000479586 HSPB7Q9UBY9 170 aa11.75□□□□□ -0.53
HMGN1-212ENST00000479586 RAB26Q9ULW5 256 aa11.75□□□□□ -0.53
HMGN1-212ENST00000479586 SLC45A2Q9UMX9 530 aa11.75□□□□□ -0.53
HMGN1-212ENST00000479586 ORM2P19652 201 aa11.74□□□□□ -0.53
HMGN1-212ENST00000479586 GATA2P23769 480 aaPredicted RBP11.74□□□□□ -0.53
HMGN1-212ENST00000479586 LSM3P62310 102 aaKnown RBP11.74□□□□□ -0.53
HMGN1-212ENST00000479586 TMEM182Q6ZP80 229 aaPredicted RBP11.74□□□□□ -0.53
HMGN1-212ENST00000479586 Q6ZTI0 123 aa11.74□□□□□ -0.53
HMGN1-212ENST00000479586 CACFD1Q9UGQ2 172 aa11.74□□□□□ -0.53
HMGN1-212ENST00000479586 SNURFLB1AK76 121 aa11.73□□□□□ -0.53
HMGN1-212ENST00000479586 CXCL3P19876 107 aa11.73□□□□□ -0.53
HMGN1-212ENST00000479586 TBPP20226 339 aa11.73□□□□□ -0.53
HMGN1-212ENST00000479586 GGNBP1Q5YKI7 109 aa11.73□□□□□ -0.53
HMGN1-212ENST00000479586 CCDC28AQ8IWP9 274 aa11.73□□□□□ -0.53
HMGN1-212ENST00000479586 OR52I2Q8NH67 350 aa11.73□□□□□ -0.53
HMGN1-212ENST00000479586 FAT3Q8TDW7 4589 aa11.73□□□□□ -0.53
HMGN1-212ENST00000479586 TMEM147Q9BVK8 224 aa11.73□□□□□ -0.53
HMGN1-212ENST00000479586 PARD6GQ9BYG4 376 aaPredicted RBP11.73□□□□□ -0.53
HMGN1-212ENST00000479586 FAM30AQ9NZY2 134 aa11.73□□□□□ -0.53
HMGN1-212ENST00000479586 PLA2G2DQ9UNK4 145 aa11.73□□□□□ -0.53
HMGN1-212ENST00000479586 C14orf166Q9Y224 244 aaKnown RBP11.73□□□□□ -0.53
HMGN1-212ENST00000479586 TMEM56-RWDD3S4R434 201 aa11.73□□□□□ -0.53
HMGN1-212ENST00000479586 IGLV5-52A0A0A0MRZ9 124 aa11.72□□□□□ -0.53
HMGN1-212ENST00000479586 CRYM-AS1A6NIL9 109 aa11.72□□□□□ -0.53
HMGN1-212ENST00000479586 CFDP00746 253 aaPredicted RBP11.72□□□□□ -0.53
HMGN1-212ENST00000479586 H3BRN7 92 aa11.71□□□□□ -0.53
HMGN1-212ENST00000479586 HPGDSO60760 199 aa11.71□□□□□ -0.53
HMGN1-212ENST00000479586 PLA2G1BP04054 148 aaKnown RBP11.71□□□□□ -0.53
HMGN1-212ENST00000479586 ATP5IP56385 69 aaPredicted RBP11.71□□□□□ -0.53
HMGN1-212ENST00000479586 SMCO1Q147U7 214 aa11.71□□□□□ -0.53
HMGN1-212ENST00000479586 PSG3Q16557 428 aa11.71□□□□□ -0.53
HMGN1-212ENST00000479586 GFI1BQ5VTD9 330 aa11.71□□□□□ -0.53
HMGN1-212ENST00000479586 FAAP20Q6NZ36 180 aa11.71□□□□□ -0.53
HMGN1-212ENST00000479586 C20orf144Q9BQM9 153 aa11.71□□□□□ -0.53
HMGN1-212ENST00000479586 MSRB1Q9NZV6 116 aa11.71□□□□□ -0.53
HMGN1-212ENST00000479586 MTFP1Q9UDX5 166 aa11.71□□□□□ -0.53
HMGN1-212ENST00000479586 RNF213Q63HN8 5207 aa11.7□□□□□ -0.54
HMGN1-212ENST00000479586 RAB3DO95716 219 aa11.7□□□□□ -0.54
HMGN1-212ENST00000479586 CCR6P51684 374 aa11.7□□□□□ -0.54
HMGN1-212ENST00000479586 GPR107Q5VW38 600 aa11.7□□□□□ -0.54
HMGN1-212ENST00000479586 BPIFCQ8NFQ6 507 aa11.7□□□□□ -0.54
HMGN1-212ENST00000479586 DEFB104AQ8WTQ1 72 aa11.7□□□□□ -0.54
HMGN1-212ENST00000479586 IL22RA2Q969J5 263 aa11.7□□□□□ -0.54
HMGN1-212ENST00000479586 RPUSD4Q96CM3 377 aaKnown RBP11.7□□□□□ -0.54
HMGN1-212ENST00000479586 TRGV2A0A075B6R0 118 aa11.69□□□□□ -0.54
HMGN1-212ENST00000479586 NPIPB6E9PJ23 425 aa11.69□□□□□ -0.54
HMGN1-212ENST00000479586 LINC00467Q9BRT7 94 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms