RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 BPIFA4PQ86YQ2 179 aa8.66□□□□□ -1.02
HLA-DMB-260ENST00000477537 LURAP1LQ8IV03 231 aa8.66□□□□□ -1.02
HLA-DMB-260ENST00000477537 OR4F17Q8NGA8 305 aa8.66□□□□□ -1.02
HLA-DMB-260ENST00000477537 ZNF48Q96MX3 618 aaPredicted RBP8.66□□□□□ -1.02
HLA-DMB-260ENST00000477537 C21orf62Q9NYP8 219 aa8.66□□□□□ -1.02
HLA-DMB-260ENST00000477537 FBN2P35556 2912 aa8.66□□□□□ -1.02
HLA-DMB-260ENST00000477537 ABCA12Q86UK0 2595 aa8.65□□□□□ -1.02
HLA-DMB-260ENST00000477537 MAP1AP78559 2803 aaPredicted RBP8.65□□□□□ -1.02
HLA-DMB-260ENST00000477537 SPG11Q96JI7 2443 aa8.65□□□□□ -1.02
HLA-DMB-260ENST00000477537 NPFFO15130 113 aa8.65□□□□□ -1.02
HLA-DMB-260ENST00000477537 NUPR1O60356 82 aa8.65□□□□□ -1.02
HLA-DMB-260ENST00000477537 LTAP01374 205 aa8.65□□□□□ -1.02
HLA-DMB-260ENST00000477537 HLA-DRB1P01911 266 aa8.65□□□□□ -1.02
HLA-DMB-260ENST00000477537 MT-ND6P03923 174 aa8.65□□□□□ -1.02
HLA-DMB-260ENST00000477537 CRISP2P16562 243 aa8.65□□□□□ -1.02
HLA-DMB-260ENST00000477537 JOSD1Q15040 202 aaPredicted RBP8.65□□□□□ -1.02
HLA-DMB-260ENST00000477537 COX19Q49B96 90 aa8.65□□□□□ -1.02
HLA-DMB-260ENST00000477537 CMTM2Q8TAZ6 248 aa8.65□□□□□ -1.02
HLA-DMB-260ENST00000477537 SMIM12Q96EX1 92 aa8.65□□□□□ -1.02
HLA-DMB-260ENST00000477537 HSPB9Q9BQS6 159 aa8.65□□□□□ -1.02
HLA-DMB-260ENST00000477537 CHRDL1Q9BU40 450 aa8.65□□□□□ -1.02
HLA-DMB-260ENST00000477537 THYN1Q9P016 225 aa8.65□□□□□ -1.02
HLA-DMB-260ENST00000477537 HECTD1Q9ULT8 2610 aa8.65□□□□□ -1.03
HLA-DMB-260ENST00000477537 ASH1LQ9NR48 2969 aaKnown RBP8.65□□□□□ -1.03
HLA-DMB-260ENST00000477537 TRBV19A0A075B6N1 114 aa8.64□□□□□ -1.03
HLA-DMB-260ENST00000477537 USF2Q15853 346 aaPredicted RBP8.64□□□□□ -1.03
HLA-DMB-260ENST00000477537 BCL6BQ8N143 479 aaPredicted RBP8.64□□□□□ -1.03
HLA-DMB-260ENST00000477537 OR5R1Q8NH85 324 aa8.64□□□□□ -1.03
HLA-DMB-260ENST00000477537 C17orf77Q96MU5 243 aa8.64□□□□□ -1.03
HLA-DMB-260ENST00000477537 CCL19Q99731 98 aa8.64□□□□□ -1.03
HLA-DMB-260ENST00000477537 MLST8Q9BVC4 326 aa8.64□□□□□ -1.03
HLA-DMB-260ENST00000477537 FBXL7Q9UJT9 491 aa8.64□□□□□ -1.03
HLA-DMB-260ENST00000477537 TP53TG3Q9ULZ0 132 aa8.64□□□□□ -1.03
HLA-DMB-260ENST00000477537 RNF24Q9Y225 148 aa8.64□□□□□ -1.03
HLA-DMB-260ENST00000477537 POLQO75417 2590 aa8.64□□□□□ -1.03
HLA-DMB-260ENST00000477537 CENPVL3A0A0U1RRI6 287 aa8.64□□□□□ -1.03
HLA-DMB-260ENST00000477537 OR2T8A6NH00 312 aa8.64□□□□□ -1.03
HLA-DMB-260ENST00000477537 IGLC2P0DOY2 106 aa8.64□□□□□ -1.03
HLA-DMB-260ENST00000477537 GZMBP10144 247 aa8.64□□□□□ -1.03
HLA-DMB-260ENST00000477537 ECSCRQ19T08 205 aa8.64□□□□□ -1.03
HLA-DMB-260ENST00000477537 GOLT1AQ6ZVE7 132 aa8.64□□□□□ -1.03
HLA-DMB-260ENST00000477537 PIMREGQ9BSJ6 248 aa8.64□□□□□ -1.03
HLA-DMB-260ENST00000477537 PRDM13Q9H4Q3 707 aa8.64□□□□□ -1.03
HLA-DMB-260ENST00000477537 ZNF331Q9NQX6 463 aaPredicted RBP8.64□□□□□ -1.03
HLA-DMB-260ENST00000477537 IGHV3OR16-10A0A075B7F0 116 aa8.63□□□□□ -1.03
HLA-DMB-260ENST00000477537 TRAV8-1A0A0A6YYK1 113 aa8.63□□□□□ -1.03
HLA-DMB-260ENST00000477537 MRPS12O15235 138 aaKnown RBP8.63□□□□□ -1.03
HLA-DMB-260ENST00000477537 COL8A1P27658 744 aa8.63□□□□□ -1.03
HLA-DMB-260ENST00000477537 KIAA1644Q3SXP7 199 aa8.63□□□□□ -1.03
HLA-DMB-260ENST00000477537 UNQ5815/PRO19632Q6UWF5 114 aa8.63□□□□□ -1.03
HLA-DMB-260ENST00000477537 LINC00322Q6ZN03 302 aaPredicted RBP8.63□□□□□ -1.03
HLA-DMB-260ENST00000477537 S100A7AQ86SG5 101 aa8.63□□□□□ -1.03
HLA-DMB-260ENST00000477537 PRNTQ86SH4 94 aa8.63□□□□□ -1.03
HLA-DMB-260ENST00000477537 Q86TA4 180 aa8.63□□□□□ -1.03
HLA-DMB-260ENST00000477537 BAGE3Q86Y29 109 aa8.63□□□□□ -1.03
HLA-DMB-260ENST00000477537 NUP35Q8NFH5 326 aa8.63□□□□□ -1.03
HLA-DMB-260ENST00000477537 FAM110DQ8TAY7 271 aaPredicted RBP8.63□□□□□ -1.03
HLA-DMB-260ENST00000477537 TSKUQ8WUA8 353 aa8.63□□□□□ -1.03
HLA-DMB-260ENST00000477537 TMUB1Q9BVT8 246 aa8.63□□□□□ -1.03
HLA-DMB-260ENST00000477537 RPP21Q9H633 154 aaKnown RBP8.63□□□□□ -1.03
HLA-DMB-260ENST00000477537 POLR3KQ9Y2Y1 108 aaPredicted RBP8.63□□□□□ -1.03
HLA-DMB-260ENST00000477537 ABCA2Q9BZC7 2435 aa8.63□□□□□ -1.03
HLA-DMB-260ENST00000477537 IGHV4-61A0A0C4DH41 118 aa8.62□□□□□ -1.03
HLA-DMB-260ENST00000477537 F2Z2F3 143 aa8.62□□□□□ -1.03
HLA-DMB-260ENST00000477537 ATP6V0E1O15342 81 aa8.62□□□□□ -1.03
HLA-DMB-260ENST00000477537 SERF1AO75920 110 aa8.62□□□□□ -1.03
HLA-DMB-260ENST00000477537 HLA-DQA1P01909 254 aa8.62□□□□□ -1.03
HLA-DMB-260ENST00000477537 LINC00310P59036 64 aa8.62□□□□□ -1.03
HLA-DMB-260ENST00000477537 PAX8Q06710 450 aa8.62□□□□□ -1.03
HLA-DMB-260ENST00000477537 SIGLEC15Q6ZMC9 328 aa8.62□□□□□ -1.03
HLA-DMB-260ENST00000477537 ZNF414Q96IQ9 312 aa8.62□□□□□ -1.03
HLA-DMB-260ENST00000477537 NEU1Q99519 415 aa8.62□□□□□ -1.03
HLA-DMB-260ENST00000477537 ZNF492Q9P255 531 aa8.62□□□□□ -1.03
HLA-DMB-260ENST00000477537 SH2D7A6NKC9 451 aaPredicted RBP8.62□□□□□ -1.03
HLA-DMB-260ENST00000477537 HIGD1CA8MV81 97 aa8.62□□□□□ -1.03
HLA-DMB-260ENST00000477537 SCGB2A1O75556 95 aa8.62□□□□□ -1.03
HLA-DMB-260ENST00000477537 IGLV2-11P01706 119 aa8.62□□□□□ -1.03
HLA-DMB-260ENST00000477537 P01737 135 aa8.62□□□□□ -1.03
HLA-DMB-260ENST00000477537 APCSP02743 223 aa8.62□□□□□ -1.03
HLA-DMB-260ENST00000477537 Q0VG73 95 aa8.62□□□□□ -1.03
HLA-DMB-260ENST00000477537 DAZAP1Q96EP5 407 aaKnown RBP8.62□□□□□ -1.03
HLA-DMB-260ENST00000477537 GNB4Q9HAV0 340 aa8.62□□□□□ -1.03
HLA-DMB-260ENST00000477537 C19orf71A6NCJ1 209 aa8.61□□□□□ -1.03
HLA-DMB-260ENST00000477537 GOSR1O95249 250 aa8.61□□□□□ -1.03
HLA-DMB-260ENST00000477537 CTSGP08311 255 aa8.61□□□□□ -1.03
HLA-DMB-260ENST00000477537 PRB4P10163 310 aaPredicted RBP8.61□□□□□ -1.03
HLA-DMB-260ENST00000477537 C9orf152Q5JTZ5 239 aa8.61□□□□□ -1.03
HLA-DMB-260ENST00000477537 RASL11AQ6T310 242 aa8.61□□□□□ -1.03
HLA-DMB-260ENST00000477537 LYPD1Q8N2G4 141 aa8.61□□□□□ -1.03
HLA-DMB-260ENST00000477537 CIARTQ8N365 385 aaPredicted RBP8.61□□□□□ -1.03
HLA-DMB-260ENST00000477537 VN1R17PQ8TDU5 208 aa8.61□□□□□ -1.03
HLA-DMB-260ENST00000477537 C10orf105Q8TEF2 133 aa8.61□□□□□ -1.03
HLA-DMB-260ENST00000477537 WIPF2Q8TF74 440 aaPredicted RBP8.61□□□□□ -1.03
HLA-DMB-260ENST00000477537 TMEM190Q8WZ59 177 aa8.61□□□□□ -1.03
HLA-DMB-260ENST00000477537 TXN2Q99757 166 aa8.61□□□□□ -1.03
HLA-DMB-260ENST00000477537 PRSS22Q9GZN4 317 aa8.61□□□□□ -1.03
HLA-DMB-260ENST00000477537 TRBV6-1A0A0K0K1D8 114 aa8.6□□□□□ -1.03
HLA-DMB-260ENST00000477537 LINC01548A6NM66 108 aa8.6□□□□□ -1.03
HLA-DMB-260ENST00000477537 BMPR1BO00238 502 aa8.6□□□□□ -1.03
HLA-DMB-260ENST00000477537 ESDP10768 282 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms