RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 HIST1H2BNQ99877 126 aa8.99□□□□□ -0.97
VAPB-204ENST00000475243 HIST1H2BMQ99879 126 aa8.99□□□□□ -0.97
VAPB-204ENST00000475243 LTBP1Q14766 1721 aa8.99□□□□□ -0.97
VAPB-204ENST00000475243 BUB1B-PAK6H3BSN5 160 aa8.99□□□□□ -0.97
VAPB-204ENST00000475243 TEX38Q6PEX7 206 aa8.99□□□□□ -0.97
VAPB-204ENST00000475243 TNFRSF14Q92956 283 aa8.99□□□□□ -0.97
VAPB-204ENST00000475243 TANC2Q9HCD6 1990 aa8.99□□□□□ -0.97
VAPB-204ENST00000475243 C5orf30Q96GV9 206 aa8.98□□□□□ -0.97
VAPB-204ENST00000475243 SLC25A2Q9BXI2 301 aa8.98□□□□□ -0.97
VAPB-204ENST00000475243 BPESC1Q9GZL8 116 aa8.98□□□□□ -0.97
VAPB-204ENST00000475243 JPT2Q9H910 190 aa8.98□□□□□ -0.97
VAPB-204ENST00000475243 ZNRD1Q9P1U0 126 aa8.98□□□□□ -0.97
VAPB-204ENST00000475243 CRIM1Q9NZV1 1036 aa8.98□□□□□ -0.97
VAPB-204ENST00000475243 PAX4O43316 350 aa8.98□□□□□ -0.97
VAPB-204ENST00000475243 LYZL1Q6UWQ5 148 aa8.98□□□□□ -0.97
VAPB-204ENST00000475243 B4DSR2 109 aa8.98□□□□□ -0.97
VAPB-204ENST00000475243 MLANAQ16655 118 aa8.98□□□□□ -0.97
VAPB-204ENST00000475243 LCN12Q6JVE5 192 aa8.98□□□□□ -0.97
VAPB-204ENST00000475243 NAA38Q9BRA0 125 aaKnown RBP8.98□□□□□ -0.97
VAPB-204ENST00000475243 M0R2P5 195 aa8.97□□□□□ -0.97
VAPB-204ENST00000475243 DSCR9P59020 149 aa8.97□□□□□ -0.97
VAPB-204ENST00000475243 UNQ6494/PRO21346Q6UXR6 183 aa8.97□□□□□ -0.97
VAPB-204ENST00000475243 ATP5L2Q7Z4Y8 100 aa8.97□□□□□ -0.97
VAPB-204ENST00000475243 WDR83OSQ9Y284 106 aa8.97□□□□□ -0.97
VAPB-204ENST00000475243 TRBV7-1A0A0A6YYK4 115 aa8.97□□□□□ -0.97
VAPB-204ENST00000475243 GGTLC3B5MD39 225 aa8.97□□□□□ -0.97
VAPB-204ENST00000475243 PPBPP02775 128 aa8.97□□□□□ -0.97
VAPB-204ENST00000475243 H0YJW9 148 aa8.97□□□□□ -0.97
VAPB-204ENST00000475243 CXCL1P09341 107 aa8.97□□□□□ -0.97
VAPB-204ENST00000475243 Q71RC1 249 aaPredicted RBP8.97□□□□□ -0.97
VAPB-204ENST00000475243 PLXNA3P51805 1871 aa8.97□□□□□ -0.97
VAPB-204ENST00000475243 TRAV9-2A0A087WT02 112 aa8.97□□□□□ -0.97
VAPB-204ENST00000475243 LINC00473A8K010 186 aa8.97□□□□□ -0.97
VAPB-204ENST00000475243 AGMATQ9BSE5 352 aa8.97□□□□□ -0.97
VAPB-204ENST00000475243 SMKR1H3BMG3 65 aa8.97□□□□□ -0.97
VAPB-204ENST00000475243 NOTCH4Q99466 2003 aa8.97□□□□□ -0.97
VAPB-204ENST00000475243 A0A087WWL8 130 aa8.96□□□□□ -0.97
VAPB-204ENST00000475243 FAM90A9PA6NNJ1 464 aa8.96□□□□□ -0.97
VAPB-204ENST00000475243 SUPT4H1P63272 117 aaKnown RBP8.96□□□□□ -0.97
VAPB-204ENST00000475243 C5orf64Q2M2E5 130 aa8.96□□□□□ -0.97
VAPB-204ENST00000475243 NTF4P34130 210 aa8.96□□□□□ -0.97
VAPB-204ENST00000475243 ZNF138P52744 262 aa8.96□□□□□ -0.97
VAPB-204ENST00000475243 SRSF4Q08170 494 aaKnown RBP8.96□□□□□ -0.97
VAPB-204ENST00000475243 MBD3L1Q8WWY6 194 aa8.96□□□□□ -0.97
VAPB-204ENST00000475243 MED13Q9UHV7 2174 aa8.96□□□□□ -0.97
VAPB-204ENST00000475243 ERCC8Q13216 396 aa8.96□□□□□ -0.97
VAPB-204ENST00000475243 RUSC1-AS1Q66K80 236 aa8.96□□□□□ -0.97
VAPB-204ENST00000475243 C14orf178Q8N769 122 aaPredicted RBP8.96□□□□□ -0.97
VAPB-204ENST00000475243 FBLN5Q9UBX5 448 aa8.96□□□□□ -0.97
VAPB-204ENST00000475243 A0A1B0GWJ7 208 aa8.96□□□□□ -0.98
VAPB-204ENST00000475243 SAA4P35542 130 aa8.96□□□□□ -0.98
VAPB-204ENST00000475243 MTURNQ8N3F0 131 aa8.96□□□□□ -0.98
VAPB-204ENST00000475243 SH2D1AO60880 128 aa8.96□□□□□ -0.98
VAPB-204ENST00000475243 PRR30Q53SZ7 412 aaPredicted RBP8.96□□□□□ -0.98
VAPB-204ENST00000475243 CHCHD1Q96BP2 118 aaKnown RBP8.96□□□□□ -0.98
VAPB-204ENST00000475243 GAFA1Q96PS6 74 aa8.96□□□□□ -0.98
VAPB-204ENST00000475243 PNRC2Q9NPJ4 139 aaKnown RBP8.96□□□□□ -0.98
VAPB-204ENST00000475243 DENND4AQ7Z401 1863 aa8.96□□□□□ -0.98
VAPB-204ENST00000475243 CFHR3Q02985 330 aa8.96□□□□□ -0.98
VAPB-204ENST00000475243 RNF223E7ERA6 249 aa8.95□□□□□ -0.98
VAPB-204ENST00000475243 DEFB130BP0DP73 79 aa8.95□□□□□ -0.98
VAPB-204ENST00000475243 DEFB130AP0DP74 79 aa8.95□□□□□ -0.98
VAPB-204ENST00000475243 MINOS1Q5TGZ0 78 aa8.95□□□□□ -0.98
VAPB-204ENST00000475243 CRIPAKQ8N1N5 446 aa8.95□□□□□ -0.98
VAPB-204ENST00000475243 SIGLEC9Q9Y336 463 aa8.95□□□□□ -0.98
VAPB-204ENST00000475243 MINOS1-NBL1R4GNA1 71 aa8.95□□□□□ -0.98
VAPB-204ENST00000475243 IGKV1-5P01602 117 aa8.95□□□□□ -0.98
VAPB-204ENST00000475243 TMEM155Q4W5P6 130 aa8.95□□□□□ -0.98
VAPB-204ENST00000475243 C1orf159Q96HA4 380 aa8.95□□□□□ -0.98
VAPB-204ENST00000475243 MCRIP2Q9BUT9 160 aaKnown RBP8.95□□□□□ -0.98
VAPB-204ENST00000475243 ERG28Q9UKR5 140 aa8.95□□□□□ -0.98
VAPB-204ENST00000475243 SIP14410 1827 aa8.95□□□□□ -0.98
VAPB-204ENST00000475243 LOC105371267A0A1B0GV96 52 aa8.95□□□□□ -0.98
VAPB-204ENST00000475243 C3orf56Q8N813 242 aa8.95□□□□□ -0.98
VAPB-204ENST00000475243 BMPERQ8N8U9 685 aa8.95□□□□□ -0.98
VAPB-204ENST00000475243 LINC00587B1AMM8 73 aa8.95□□□□□ -0.98
VAPB-204ENST00000475243 GAS1P54826 345 aa8.95□□□□□ -0.98
VAPB-204ENST00000475243 CSTL1Q9H114 145 aa8.95□□□□□ -0.98
VAPB-204ENST00000475243 TRAV8-4A0A0B4J246 113 aa8.95□□□□□ -0.98
VAPB-204ENST00000475243 SYNJ2BPP57105 145 aa8.95□□□□□ -0.98
VAPB-204ENST00000475243 C20orf204Q6ZNR8 217 aa8.95□□□□□ -0.98
VAPB-204ENST00000475243 GLRX5Q86SX6 157 aa8.95□□□□□ -0.98
VAPB-204ENST00000475243 hDV102S1A0JD36 115 aa8.95□□□□□ -0.98
VAPB-204ENST00000475243 RPL36AP83881 106 aaKnown RBP8.95□□□□□ -0.98
VAPB-204ENST00000475243 NUP35Q8NFH5 326 aa8.95□□□□□ -0.98
VAPB-204ENST00000475243 RPL36ALQ969Q0 106 aaKnown RBP8.95□□□□□ -0.98
VAPB-204ENST00000475243 A6NNC1 897 aa8.94□□□□□ -0.98
VAPB-204ENST00000475243 INS-IGF2F8WCM5 200 aa8.94□□□□□ -0.98
VAPB-204ENST00000475243 INSP01308 110 aa8.94□□□□□ -0.98
VAPB-204ENST00000475243 IGKV1-16P04430 117 aa8.94□□□□□ -0.98
VAPB-204ENST00000475243 TRGV9Q99603 122 aa8.94□□□□□ -0.98
VAPB-204ENST00000475243 IGKV1D-17A0A075B6S4 117 aa8.94□□□□□ -0.98
VAPB-204ENST00000475243 TRAV13-1A0A0B4J241 112 aa8.94□□□□□ -0.98
VAPB-204ENST00000475243 CLPSP04118 112 aa8.94□□□□□ -0.98
VAPB-204ENST00000475243 ORAOV1Q8WV07 137 aa8.94□□□□□ -0.98
VAPB-204ENST00000475243 E7EQL1 145 aa8.94□□□□□ -0.98
VAPB-204ENST00000475243 SAMD5Q5TGI4 173 aa8.94□□□□□ -0.98
VAPB-204ENST00000475243 MORN3Q6PF18 240 aaPredicted RBP8.94□□□□□ -0.98
VAPB-204ENST00000475243 ZNF625Q96I27 306 aaPredicted RBP8.94□□□□□ -0.98
VAPB-204ENST00000475243 RPP25LQ8N5L8 163 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms