RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 DPM2O94777 84 aa5.84□□□□□ -1.47
GPNMB-209ENST00000474157 PPYP01298 95 aa5.84□□□□□ -1.47
GPNMB-209ENST00000474157 GYPBP06028 91 aa5.84□□□□□ -1.47
GPNMB-209ENST00000474157 ASAH2BP0C7U1 165 aa5.84□□□□□ -1.47
GPNMB-209ENST00000474157 NPPCP23582 126 aa5.84□□□□□ -1.47
GPNMB-209ENST00000474157 HLA-DMBP28068 263 aa5.84□□□□□ -1.47
GPNMB-209ENST00000474157 NMUP48645 174 aa5.84□□□□□ -1.47
GPNMB-209ENST00000474157 RTL8BQ17RB0 113 aa5.84□□□□□ -1.47
GPNMB-209ENST00000474157 FAM120AOSQ5T036 256 aa5.84□□□□□ -1.47
GPNMB-209ENST00000474157 GAGE2AQ6NT46 116 aa5.84□□□□□ -1.47
GPNMB-209ENST00000474157 FAM231DQ6ZW35 169 aa5.84□□□□□ -1.47
GPNMB-209ENST00000474157 Q71RC1 249 aaPredicted RBP5.84□□□□□ -1.47
GPNMB-209ENST00000474157 MEX3DQ86XN8 651 aaKnown RBP5.84□□□□□ -1.47
GPNMB-209ENST00000474157 C15orf53Q8NAA6 179 aa5.84□□□□□ -1.47
GPNMB-209ENST00000474157 OR2A1Q8NGT9 310 aa5.84□□□□□ -1.47
GPNMB-209ENST00000474157 IL1F10Q8WWZ1 152 aa5.84□□□□□ -1.47
GPNMB-209ENST00000474157 CCL26Q9Y258 94 aa5.84□□□□□ -1.47
GPNMB-209ENST00000474157 AHCTF1Q8WYP5 2266 aa5.84□□□□□ -1.47
GPNMB-209ENST00000474157 GOLGA4Q13439 2230 aaKnown RBP5.84□□□□□ -1.47
GPNMB-209ENST00000474157 SCN2AQ99250 2005 aa5.84□□□□□ -1.48
GPNMB-209ENST00000474157 IGLV3-16A0A075B6K0 115 aa5.83□□□□□ -1.48
GPNMB-209ENST00000474157 K7EN84 100 aa5.83□□□□□ -1.48
GPNMB-209ENST00000474157 SSSCA1O60232 199 aa5.83□□□□□ -1.48
GPNMB-209ENST00000474157 MPDU1O75352 247 aa5.83□□□□□ -1.48
GPNMB-209ENST00000474157 NDUFC2O95298 119 aa5.83□□□□□ -1.48
GPNMB-209ENST00000474157 CLDN7O95471 211 aa5.83□□□□□ -1.48
GPNMB-209ENST00000474157 IGHMP01871 453 aa5.83□□□□□ -1.48
GPNMB-209ENST00000474157 ACYP1P07311 99 aa5.83□□□□□ -1.48
GPNMB-209ENST00000474157 PLGLB1Q02325 96 aa5.83□□□□□ -1.48
GPNMB-209ENST00000474157 KRTAP21-3Q3LHN1 58 aa5.83□□□□□ -1.48
GPNMB-209ENST00000474157 C1orf195Q5TG92 126 aa5.83□□□□□ -1.48
GPNMB-209ENST00000474157 IL17RELQ6ZVW7 336 aa5.83□□□□□ -1.48
GPNMB-209ENST00000474157 C6orf201Q7Z4U5 140 aa5.83□□□□□ -1.48
GPNMB-209ENST00000474157 TRPT1Q86TN4 253 aaKnown RBP5.83□□□□□ -1.48
GPNMB-209ENST00000474157 GGNQ86UU5 652 aa5.83□□□□□ -1.48
GPNMB-209ENST00000474157 PRIMA1Q86XR5 153 aa5.83□□□□□ -1.48
GPNMB-209ENST00000474157 ODF3L1Q8IXM7 274 aa5.83□□□□□ -1.48
GPNMB-209ENST00000474157 TMEM86BQ8N661 226 aa5.83□□□□□ -1.48
GPNMB-209ENST00000474157 ZPLD1Q8TCW7 415 aa5.83□□□□□ -1.48
GPNMB-209ENST00000474157 TMEM158Q8WZ71 300 aa5.83□□□□□ -1.48
GPNMB-209ENST00000474157 PDFQ9HBH1 243 aa5.83□□□□□ -1.48
GPNMB-209ENST00000474157 STARD5Q9NSY2 213 aa5.83□□□□□ -1.48
GPNMB-209ENST00000474157 LAMTOR3Q9UHA4 124 aa5.83□□□□□ -1.48
GPNMB-209ENST00000474157 R4GMQ9 66 aa5.83□□□□□ -1.48
GPNMB-209ENST00000474157 COL5A1P20908 1838 aaPredicted RBP5.83□□□□□ -1.48
GPNMB-209ENST00000474157 FBN2P35556 2912 aa5.82□□□□□ -1.48
GPNMB-209ENST00000474157 THADAQ6YHU6 1953 aa5.82□□□□□ -1.48
GPNMB-209ENST00000474157 KNTC1P50748 2209 aa5.82□□□□□ -1.48
GPNMB-209ENST00000474157 LOC107984640A0A0U1RRK4 108 aa5.82□□□□□ -1.48
GPNMB-209ENST00000474157 TRACP01848 142 aa5.82□□□□□ -1.48
GPNMB-209ENST00000474157 RBP4P02753 201 aa5.82□□□□□ -1.48
GPNMB-209ENST00000474157 HMGN2P05204 90 aaKnown RBP5.82□□□□□ -1.48
GPNMB-209ENST00000474157 PSMB8P28062 276 aa5.82□□□□□ -1.48
GPNMB-209ENST00000474157 INSL3P51460 131 aa5.82□□□□□ -1.48
GPNMB-209ENST00000474157 SRYQ05066 204 aa5.82□□□□□ -1.48
GPNMB-209ENST00000474157 PRDX1Q06830 199 aaKnown RBP5.82□□□□□ -1.48
GPNMB-209ENST00000474157 FHL1Q13642 323 aa5.82□□□□□ -1.48
GPNMB-209ENST00000474157 FAM53BQ14153 422 aa5.82□□□□□ -1.48
GPNMB-209ENST00000474157 C12orf74Q32Q52 190 aa5.82□□□□□ -1.48
GPNMB-209ENST00000474157 HES3Q5TGS1 186 aa5.82□□□□□ -1.48
GPNMB-209ENST00000474157 HIST2H2BCQ6DN03 193 aa5.82□□□□□ -1.48
GPNMB-209ENST00000474157 LINC00336Q6ZUF6 198 aa5.82□□□□□ -1.48
GPNMB-209ENST00000474157 PFN4Q8NHR9 129 aa5.82□□□□□ -1.48
GPNMB-209ENST00000474157 COPS9Q8WXC6 57 aa5.82□□□□□ -1.48
GPNMB-209ENST00000474157 DPH3Q96FX2 82 aa5.82□□□□□ -1.48
GPNMB-209ENST00000474157 ZC2HC1AQ96GY0 325 aa5.82□□□□□ -1.48
GPNMB-209ENST00000474157 GLIPR2Q9H4G4 154 aa5.82□□□□□ -1.48
GPNMB-209ENST00000474157 C20orf141Q9NUB4 165 aa5.82□□□□□ -1.48
GPNMB-209ENST00000474157 HILPDAQ9Y5L2 63 aa5.82□□□□□ -1.48
GPNMB-209ENST00000474157 LRRK2Q5S007 2527 aa5.82□□□□□ -1.48
GPNMB-209ENST00000474157 ITPR3Q14573 2671 aa5.81□□□□□ -1.48
GPNMB-209ENST00000474157 TRAV27A0A087WT01 109 aa5.81□□□□□ -1.48
GPNMB-209ENST00000474157 A0A0A6YYD5 115 aa5.81□□□□□ -1.48
GPNMB-209ENST00000474157 TRAV4A0A0B4J268 109 aa5.81□□□□□ -1.48
GPNMB-209ENST00000474157 TCRBV4S1A1TA0A5B7 111 aa5.81□□□□□ -1.48
GPNMB-209ENST00000474157 OVOL1O14753 267 aa5.81□□□□□ -1.48
GPNMB-209ENST00000474157 IL4P05112 153 aa5.81□□□□□ -1.48
GPNMB-209ENST00000474157 LGALS1P09382 135 aaKnown RBP5.81□□□□□ -1.48
GPNMB-209ENST00000474157 COX7CP15954 63 aa5.81□□□□□ -1.48
GPNMB-209ENST00000474157 BCL3P20749 454 aa5.81□□□□□ -1.48
GPNMB-209ENST00000474157 PRDX2P32119 198 aa5.81□□□□□ -1.48
GPNMB-209ENST00000474157 TNFRSF4P43489 277 aa5.81□□□□□ -1.48
GPNMB-209ENST00000474157 HOXA4Q00056 320 aaPredicted RBP5.81□□□□□ -1.48
GPNMB-209ENST00000474157 C1orf61Q13536 156 aa5.81□□□□□ -1.48
GPNMB-209ENST00000474157 FHL2Q14192 279 aa5.81□□□□□ -1.48
GPNMB-209ENST00000474157 IZUMO4Q1ZYL8 232 aa5.81□□□□□ -1.48
GPNMB-209ENST00000474157 ZNF718Q3SXZ3 478 aa5.81□□□□□ -1.48
GPNMB-209ENST00000474157 SLC48A1Q6P1K1 146 aa5.81□□□□□ -1.48
GPNMB-209ENST00000474157 ACP7Q6ZNF0 438 aa5.81□□□□□ -1.48
GPNMB-209ENST00000474157 NFE4Q86UQ8 179 aa5.81□□□□□ -1.48
GPNMB-209ENST00000474157 CIARTQ8N365 385 aaPredicted RBP5.81□□□□□ -1.48
GPNMB-209ENST00000474157 IGFBPL1Q8WX77 278 aa5.81□□□□□ -1.48
GPNMB-209ENST00000474157 DNAJA3Q96EY1 480 aa5.81□□□□□ -1.48
GPNMB-209ENST00000474157 TIMD4Q96H15 378 aa5.81□□□□□ -1.48
GPNMB-209ENST00000474157 CARD19Q96LW7 228 aa5.81□□□□□ -1.48
GPNMB-209ENST00000474157 C1QTNF5Q9BXJ0 243 aa5.81□□□□□ -1.48
GPNMB-209ENST00000474157 TTTY10Q9BZA0 68 aa5.81□□□□□ -1.48
GPNMB-209ENST00000474157 SLC25A39Q9BZJ4 359 aaPredicted RBP5.81□□□□□ -1.48
GPNMB-209ENST00000474157 KLK15Q9H2R5 256 aa5.81□□□□□ -1.48
GPNMB-209ENST00000474157 LIME1Q9H400 295 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms