RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 ATP6V1G3Q96LB4 118 aa-0.88□□□□□ -2.55
PRPF40A-207ENST00000471701 LIMD2Q9BT23 127 aa-0.88□□□□□ -2.55
PRPF40A-207ENST00000471701 PROK2Q9HC23 129 aa-0.88□□□□□ -2.55
PRPF40A-207ENST00000471701 PTPRDP23468 1912 aa-0.89□□□□□ -2.55
PRPF40A-207ENST00000471701 MYLKQ15746 1914 aa-0.89□□□□□ -2.55
PRPF40A-207ENST00000471701 hCG_1818297A0A087WSY0 165 aa-0.89□□□□□ -2.55
PRPF40A-207ENST00000471701 A0A087WSZ3 146 aa-0.89□□□□□ -2.55
PRPF40A-207ENST00000471701 A8MT66 165 aa-0.89□□□□□ -2.55
PRPF40A-207ENST00000471701 GPR31O00270 319 aa-0.89□□□□□ -2.55
PRPF40A-207ENST00000471701 CNIH1O95406 144 aa-0.89□□□□□ -2.55
PRPF40A-207ENST00000471701 IGLV1-51P01701 117 aa-0.89□□□□□ -2.55
PRPF40A-207ENST00000471701 TTRP02766 147 aa-0.89□□□□□ -2.55
PRPF40A-207ENST00000471701 RPL37AP61513 92 aaKnown RBP-0.89□□□□□ -2.55
PRPF40A-207ENST00000471701 DCUN1D1Q96GG9 259 aa-0.89□□□□□ -2.55
PRPF40A-207ENST00000471701 C8orf76Q96K31 380 aa-0.89□□□□□ -2.55
PRPF40A-207ENST00000471701 ASXL3Q9C0F0 2248 aa-0.89□□□□□ -2.55
PRPF40A-207ENST00000471701 NCOA1Q15788 1441 aa-0.89□□□□□ -2.55
PRPF40A-207ENST00000471701 LRP2P98164 4655 aa-0.9□□□□□ -2.55
PRPF40A-207ENST00000471701 HSPG2P98160 4391 aa-0.9□□□□□ -2.55
PRPF40A-207ENST00000471701 M0R233 179 aa-0.9□□□□□ -2.55
PRPF40A-207ENST00000471701 SRP14P37108 136 aaKnown RBP-0.9□□□□□ -2.55
PRPF40A-207ENST00000471701 AP3S2P59780 193 aa-0.9□□□□□ -2.55
PRPF40A-207ENST00000471701 EIF3IQ13347 325 aaKnown RBP-0.9□□□□□ -2.55
PRPF40A-207ENST00000471701 OR10AG1Q8NH19 301 aa-0.9□□□□□ -2.55
PRPF40A-207ENST00000471701 CT55Q8WUE5 264 aa-0.9□□□□□ -2.55
PRPF40A-207ENST00000471701 POP5Q969H6 163 aaKnown RBP-0.9□□□□□ -2.55
PRPF40A-207ENST00000471701 RMND5BQ96G75 393 aaPredicted RBP-0.9□□□□□ -2.55
PRPF40A-207ENST00000471701 HSPB8Q9UJY1 196 aa-0.9□□□□□ -2.55
PRPF40A-207ENST00000471701 NOSIPQ9Y314 301 aaKnown RBP-0.9□□□□□ -2.55
PRPF40A-207ENST00000471701 TRGV10A0A0A0MS01 117 aa-0.91□□□□□ -2.56
PRPF40A-207ENST00000471701 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-0.91□□□□□ -2.56
PRPF40A-207ENST00000471701 PPIBP23284 216 aaKnown RBP-0.91□□□□□ -2.56
PRPF40A-207ENST00000471701 SULT1A1P50225 295 aa-0.91□□□□□ -2.56
PRPF40A-207ENST00000471701 KRR1Q13601 381 aaKnown RBP-0.91□□□□□ -2.56
PRPF40A-207ENST00000471701 C22orf39Q6P5X5 142 aa-0.91□□□□□ -2.56
PRPF40A-207ENST00000471701 Q6Q795 121 aa-0.91□□□□□ -2.56
PRPF40A-207ENST00000471701 TMEM14EPQ6UXP3 125 aa-0.91□□□□□ -2.56
PRPF40A-207ENST00000471701 ANGPTL5Q86XS5 388 aa-0.91□□□□□ -2.56
PRPF40A-207ENST00000471701 KIFC1Q9BW19 673 aa-0.91□□□□□ -2.56
PRPF40A-207ENST00000471701 MRPS26Q9BYN8 205 aaKnown RBP-0.91□□□□□ -2.56
PRPF40A-207ENST00000471701 RNF122Q9H9V4 155 aa-0.91□□□□□ -2.56
PRPF40A-207ENST00000471701 GUCA1BQ9UMX6 200 aa-0.91□□□□□ -2.56
PRPF40A-207ENST00000471701 U3KQA8 63 aa-0.91□□□□□ -2.56
PRPF40A-207ENST00000471701 RBBP6Q7Z6E9 1792 aaKnown RBP-0.91□□□□□ -2.56
PRPF40A-207ENST00000471701 ABCA2Q9BZC7 2435 aa-0.91□□□□□ -2.56
PRPF40A-207ENST00000471701 MYO5AQ9Y4I1 1855 aaKnown RBP-0.92□□□□□ -2.56
PRPF40A-207ENST00000471701 hADV38S2A0JD32 116 aa-0.92□□□□□ -2.56
PRPF40A-207ENST00000471701 RNASE7Q9H1E1 156 aaKnown RBP-0.92□□□□□ -2.56
PRPF40A-207ENST00000471701 TCEAL2Q9H3H9 227 aaPredicted RBP-0.92□□□□□ -2.56
PRPF40A-207ENST00000471701 TVP23BQ9NYZ1 205 aa-0.92□□□□□ -2.56
PRPF40A-207ENST00000471701 ODAMA1E959 279 aa-0.93□□□□□ -2.56
PRPF40A-207ENST00000471701 J3QRK9 145 aa-0.93□□□□□ -2.56
PRPF40A-207ENST00000471701 RPL37P61927 97 aaKnown RBP-0.93□□□□□ -2.56
PRPF40A-207ENST00000471701 CMSS1Q9BQ75 279 aaKnown RBP-0.93□□□□□ -2.56
PRPF40A-207ENST00000471701 UQCC1Q9NVA1 299 aa-0.93□□□□□ -2.56
PRPF40A-207ENST00000471701 BOKQ9UMX3 212 aaPredicted RBP-0.93□□□□□ -2.56
PRPF40A-207ENST00000471701 MAP3K5Q99683 1374 aa-0.94□□□□□ -2.56
PRPF40A-207ENST00000471701 C9orf170A2RU37 121 aa-0.94□□□□□ -2.56
PRPF40A-207ENST00000471701 CLDN24A6NM45 220 aa-0.94□□□□□ -2.56
PRPF40A-207ENST00000471701 C17orf112F2Z3M2 114 aa-0.94□□□□□ -2.56
PRPF40A-207ENST00000471701 OR7C1O76099 320 aaPredicted RBP-0.94□□□□□ -2.56
PRPF40A-207ENST00000471701 C8GP07360 202 aa-0.94□□□□□ -2.56
PRPF40A-207ENST00000471701 CASC2Q6XLA1 102 aa-0.94□□□□□ -2.56
PRPF40A-207ENST00000471701 ARPINQ7Z6K5 226 aa-0.94□□□□□ -2.56
PRPF40A-207ENST00000471701 CLDN22Q8N7P3 220 aa-0.94□□□□□ -2.56
PRPF40A-207ENST00000471701 OR51A2Q8NGJ7 313 aa-0.94□□□□□ -2.56
PRPF40A-207ENST00000471701 VPS29Q9UBQ0 182 aa-0.94□□□□□ -2.56
PRPF40A-207ENST00000471701 NUP98P52948 1817 aa-0.94□□□□□ -2.56
PRPF40A-207ENST00000471701 IFNA5P01569 189 aa-0.95□□□□□ -2.56
PRPF40A-207ENST00000471701 RANP62826 216 aaKnown RBP-0.95□□□□□ -2.56
PRPF40A-207ENST00000471701 IAH1Q2TAA2 248 aaPredicted RBP-0.95□□□□□ -2.56
PRPF40A-207ENST00000471701 PATE2Q6UY27 113 aa-0.95□□□□□ -2.56
PRPF40A-207ENST00000471701 OR6V1Q8N148 313 aa-0.95□□□□□ -2.56
PRPF40A-207ENST00000471701 LPAR5Q9H1C0 372 aa-0.95□□□□□ -2.56
PRPF40A-207ENST00000471701 KIF1BO60333 1816 aa-0.95□□□□□ -2.56
PRPF40A-207ENST00000471701 KMT2AQ03164 3969 aa-0.95□□□□□ -2.56
PRPF40A-207ENST00000471701 PIK3C2GO75747 1445 aa-0.96□□□□□ -2.56
PRPF40A-207ENST00000471701 FAM25EA8MYX2 175 aa-0.96□□□□□ -2.56
PRPF40A-207ENST00000471701 KPNA3O00505 521 aaPredicted RBP-0.96□□□□□ -2.56
PRPF40A-207ENST00000471701 IFNA16P05015 189 aa-0.96□□□□□ -2.56
PRPF40A-207ENST00000471701 SERPINA6P08185 405 aa-0.96□□□□□ -2.56
PRPF40A-207ENST00000471701 CAV3P56539 151 aa-0.96□□□□□ -2.56
PRPF40A-207ENST00000471701 PIGPP57054 158 aa-0.96□□□□□ -2.56
PRPF40A-207ENST00000471701 RRN3P1Q2M238 152 aa-0.96□□□□□ -2.56
PRPF40A-207ENST00000471701 LYRM7Q5U5X0 104 aa-0.96□□□□□ -2.56
PRPF40A-207ENST00000471701 PLEKHB2Q96CS7 222 aa-0.96□□□□□ -2.56
PRPF40A-207ENST00000471701 YPEL2Q96QA6 119 aa-0.96□□□□□ -2.56
PRPF40A-207ENST00000471701 GLTPQ9NZD2 209 aa-0.96□□□□□ -2.56
PRPF40A-207ENST00000471701 ATP6V1DQ9Y5K8 247 aa-0.96□□□□□ -2.56
PRPF40A-207ENST00000471701 ARL5AQ9Y689 179 aa-0.96□□□□□ -2.56
PRPF40A-207ENST00000471701 STAB1Q9NY15 2570 aa-0.96□□□□□ -2.56
PRPF40A-207ENST00000471701 A0A087WUJ7 227 aa-0.97□□□□□ -2.56
PRPF40A-207ENST00000471701 SERPINB9P50453 376 aa-0.97□□□□□ -2.56
PRPF40A-207ENST00000471701 TMED1Q13445 227 aa-0.97□□□□□ -2.56
PRPF40A-207ENST00000471701 SPINK13Q1W4C9 94 aa-0.97□□□□□ -2.56
PRPF40A-207ENST00000471701 GLYATL3Q5SZD4 288 aa-0.97□□□□□ -2.56
PRPF40A-207ENST00000471701 BORCS7Q96B45 105 aa-0.97□□□□□ -2.56
PRPF40A-207ENST00000471701 LLPHQ9BRT6 129 aaKnown RBP-0.97□□□□□ -2.56
PRPF40A-207ENST00000471701 MUC2Q02817 5179 aa-0.97□□□□□ -2.56
PRPF40A-207ENST00000471701 MUC12Q9UKN1 5478 aa-0.97□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms