RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 CHRDL1Q9BU40 450 aa13.23□□□□□ -0.29
SMARCD3-206ENST00000470588 TRBV19A0A075B6N1 114 aa13.22□□□□□ -0.29
SMARCD3-206ENST00000470588 TCRAP04437 139 aa13.22□□□□□ -0.29
SMARCD3-206ENST00000470588 USF2Q15853 346 aaPredicted RBP13.22□□□□□ -0.29
SMARCD3-206ENST00000470588 BRD3OSQ6XYD6 125 aa13.22□□□□□ -0.29
SMARCD3-206ENST00000470588 ZNF502Q8TBZ5 544 aa13.22□□□□□ -0.29
SMARCD3-206ENST00000470588 GPR82Q96P67 336 aa13.22□□□□□ -0.29
SMARCD3-206ENST00000470588 OR2T8A6NH00 312 aa13.22□□□□□ -0.29
SMARCD3-206ENST00000470588 H3BTX0 84 aa13.22□□□□□ -0.29
SMARCD3-206ENST00000470588 MRPS12O15235 138 aaKnown RBP13.22□□□□□ -0.29
SMARCD3-206ENST00000470588 IGHV3-23P01764 117 aa13.22□□□□□ -0.29
SMARCD3-206ENST00000470588 IGLC2P0DOY2 106 aa13.22□□□□□ -0.29
SMARCD3-206ENST00000470588 IGHV4-38-2P0DP08 117 aa13.22□□□□□ -0.29
SMARCD3-206ENST00000470588 CRIP2P52943 208 aaPredicted RBP13.22□□□□□ -0.29
SMARCD3-206ENST00000470588 RHOGP84095 191 aa13.22□□□□□ -0.29
SMARCD3-206ENST00000470588 COA6Q5JTJ3 125 aaKnown RBP13.22□□□□□ -0.29
SMARCD3-206ENST00000470588 HIST3H2BBQ8N257 126 aa13.22□□□□□ -0.29
SMARCD3-206ENST00000470588 LINC01548A6NM66 108 aa13.21□□□□□ -0.29
SMARCD3-206ENST00000470588 GATCO43716 136 aaKnown RBP13.21□□□□□ -0.29
SMARCD3-206ENST00000470588 SMIM6P0DI80 62 aa13.21□□□□□ -0.29
SMARCD3-206ENST00000470588 CMTM2Q8TAZ6 248 aa13.21□□□□□ -0.29
SMARCD3-206ENST00000470588 FBN2P35556 2912 aa13.2□□□□□ -0.3
SMARCD3-206ENST00000470588 TRBV6-1A0A0K0K1D8 114 aa13.2□□□□□ -0.3
SMARCD3-206ENST00000470588 SMIM27A0A1W2PRY6 76 aa13.2□□□□□ -0.3
SMARCD3-206ENST00000470588 ZNF705GA8MUZ8 300 aaPredicted RBP13.2□□□□□ -0.3
SMARCD3-206ENST00000470588 IGHV4-31P0DP07 118 aa13.2□□□□□ -0.3
SMARCD3-206ENST00000470588 C15orf32Q32M92 178 aa13.2□□□□□ -0.3
SMARCD3-206ENST00000470588 COX19Q49B96 90 aa13.2□□□□□ -0.3
SMARCD3-206ENST00000470588 TMEM219Q86XT9 240 aa13.2□□□□□ -0.3
SMARCD3-206ENST00000470588 OR8I2Q8N0Y5 310 aa13.2□□□□□ -0.3
SMARCD3-206ENST00000470588 MAPK1IP1LQ8NDC0 245 aa13.2□□□□□ -0.3
SMARCD3-206ENST00000470588 ZNF414Q96IQ9 312 aa13.2□□□□□ -0.3
SMARCD3-206ENST00000470588 MLST8Q9BVC4 326 aa13.2□□□□□ -0.3
SMARCD3-206ENST00000470588 SERTAD4Q9NUC0 356 aa13.2□□□□□ -0.3
SMARCD3-206ENST00000470588 IFITM10A6NMD0 228 aa13.2□□□□□ -0.3
SMARCD3-206ENST00000470588 G3V318 75 aa13.2□□□□□ -0.3
SMARCD3-206ENST00000470588 AMY1AP04745 511 aa13.2□□□□□ -0.3
SMARCD3-206ENST00000470588 S100A2P29034 98 aa13.2□□□□□ -0.3
SMARCD3-206ENST00000470588 ADMP35318 185 aa13.2□□□□□ -0.3
SMARCD3-206ENST00000470588 NHLRC2Q8NBF2 726 aa13.2□□□□□ -0.3
SMARCD3-206ENST00000470588 NUDT10Q8NFP7 164 aa13.2□□□□□ -0.3
SMARCD3-206ENST00000470588 EEF1AKMT3Q96AZ1 226 aa13.2□□□□□ -0.3
SMARCD3-206ENST00000470588 NUDT11Q96G61 164 aa13.2□□□□□ -0.3
SMARCD3-206ENST00000470588 GRAMD2BQ96HH9 432 aa13.2□□□□□ -0.3
SMARCD3-206ENST00000470588 RABAC1Q9UI14 185 aa13.2□□□□□ -0.3
SMARCD3-206ENST00000470588 RPH3ALQ9UNE2 315 aa13.2□□□□□ -0.3
SMARCD3-206ENST00000470588 PTPN13Q12923 2485 aa13.19□□□□□ -0.3
SMARCD3-206ENST00000470588 TRBV7-1A0A0A6YYK4 115 aa13.19□□□□□ -0.3
SMARCD3-206ENST00000470588 XKRY2A2RUG3 117 aa13.19□□□□□ -0.3
SMARCD3-206ENST00000470588 A6NDX4 124 aa13.19□□□□□ -0.3
SMARCD3-206ENST00000470588 SH2D7A6NKC9 451 aaPredicted RBP13.19□□□□□ -0.3
SMARCD3-206ENST00000470588 LTAP01374 205 aa13.19□□□□□ -0.3
SMARCD3-206ENST00000470588 PDE6HQ13956 83 aa13.19□□□□□ -0.3
SMARCD3-206ENST00000470588 C19orf54Q5BKX5 351 aa13.19□□□□□ -0.3
SMARCD3-206ENST00000470588 ATP6V0BQ99437 205 aa13.19□□□□□ -0.3
SMARCD3-206ENST00000470588 TRAV41A0A0B4J266 112 aa13.18□□□□□ -0.3
SMARCD3-206ENST00000470588 BMPR1BO00238 502 aa13.18□□□□□ -0.3
SMARCD3-206ENST00000470588 CLEC3BP05452 202 aa13.18□□□□□ -0.3
SMARCD3-206ENST00000470588 GFI1BQ5VTD9 330 aa13.18□□□□□ -0.3
SMARCD3-206ENST00000470588 CYB5R2Q6BCY4 276 aa13.18□□□□□ -0.3
SMARCD3-206ENST00000470588 SIGLEC15Q6ZMC9 328 aa13.18□□□□□ -0.3
SMARCD3-206ENST00000470588 TMEM183AQ8IXX5 376 aa13.18□□□□□ -0.3
SMARCD3-206ENST00000470588 BCL6BQ8N143 479 aaPredicted RBP13.18□□□□□ -0.3
SMARCD3-206ENST00000470588 EXOC3-AS1Q8N2X6 119 aa13.18□□□□□ -0.3
SMARCD3-206ENST00000470588 C17orf77Q96MU5 243 aa13.18□□□□□ -0.3
SMARCD3-206ENST00000470588 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.18□□□□□ -0.3
SMARCD3-206ENST00000470588 IZUMO1RA6ND01 250 aa13.17□□□□□ -0.3
SMARCD3-206ENST00000470588 M0QZK8 103 aa13.17□□□□□ -0.3
SMARCD3-206ENST00000470588 RPL7P18124 248 aaKnown RBP13.17□□□□□ -0.3
SMARCD3-206ENST00000470588 GNB1LQ9BYB4 327 aa13.17□□□□□ -0.3
SMARCD3-206ENST00000470588 GPR61Q9BZJ8 451 aa13.17□□□□□ -0.3
SMARCD3-206ENST00000470588 ZNF492Q9P255 531 aa13.17□□□□□ -0.3
SMARCD3-206ENST00000470588 CENPEQ02224 2701 aa13.17□□□□□ -0.3
SMARCD3-206ENST00000470588 CR1P17927 2039 aa13.17□□□□□ -0.3
SMARCD3-206ENST00000470588 CELSR2Q9HCU4 2923 aa13.17□□□□□ -0.3
SMARCD3-206ENST00000470588 GPR183P32249 361 aa13.17□□□□□ -0.3
SMARCD3-206ENST00000470588 ATP5G2Q06055 141 aa13.17□□□□□ -0.3
SMARCD3-206ENST00000470588 WDR73Q6P4I2 378 aa13.17□□□□□ -0.3
SMARCD3-206ENST00000470588 KRTAP1-3Q8IUG1 177 aa13.17□□□□□ -0.3
SMARCD3-206ENST00000470588 ARL6IP6Q8N6S5 226 aa13.17□□□□□ -0.3
SMARCD3-206ENST00000470588 NAV2Q8IVL1 2488 aa13.16□□□□□ -0.3
SMARCD3-206ENST00000470588 K7EQM0 130 aa13.16□□□□□ -0.3
SMARCD3-206ENST00000470588 PSG9Q00887 426 aa13.16□□□□□ -0.3
SMARCD3-206ENST00000470588 TOMM20LQ6UXN7 152 aa13.16□□□□□ -0.3
SMARCD3-206ENST00000470588 SGK494Q96LW2 274 aa13.16□□□□□ -0.3
SMARCD3-206ENST00000470588 ABCA12Q86UK0 2595 aa13.15□□□□□ -0.3
SMARCD3-206ENST00000470588 FAM223BA6NKX1 122 aa13.15□□□□□ -0.3
SMARCD3-206ENST00000470588 H3BUX3 64 aa13.15□□□□□ -0.3
SMARCD3-206ENST00000470588 BRI3O95415 125 aa13.15□□□□□ -0.3
SMARCD3-206ENST00000470588 AVPP01185 164 aa13.15□□□□□ -0.3
SMARCD3-206ENST00000470588 IGF1P05019 195 aa13.15□□□□□ -0.3
SMARCD3-206ENST00000470588 IER3P46695 156 aa13.15□□□□□ -0.3
SMARCD3-206ENST00000470588 RAB9AP51151 201 aa13.15□□□□□ -0.3
SMARCD3-206ENST00000470588 GOLT1AQ6ZVE7 132 aa13.15□□□□□ -0.3
SMARCD3-206ENST00000470588 FAM223AQ8IWN6 122 aa13.15□□□□□ -0.3
SMARCD3-206ENST00000470588 MS4A10Q96PG2 267 aa13.15□□□□□ -0.3
SMARCD3-206ENST00000470588 AAMDCQ9H7C9 122 aa13.15□□□□□ -0.3
SMARCD3-206ENST00000470588 SOX21Q9Y651 276 aaPredicted RBP13.15□□□□□ -0.3
SMARCD3-206ENST00000470588 POLQO75417 2590 aa13.15□□□□□ -0.3
SMARCD3-206ENST00000470588 HELZ2Q9BYK8 2649 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms