RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 BAGE2Q86Y30 109 aa10.56□□□□□ -0.72
UBE4B-206ENST00000466379 TMEM68Q96MH6 324 aa10.56□□□□□ -0.72
UBE4B-206ENST00000466379 IMMP2LQ96T52 175 aa10.56□□□□□ -0.72
UBE4B-206ENST00000466379 IL36BQ9NZH7 164 aa10.56□□□□□ -0.72
UBE4B-206ENST00000466379 RNF223E7ERA6 249 aa10.56□□□□□ -0.72
UBE4B-206ENST00000466379 UBE2G1P62253 170 aa10.56□□□□□ -0.72
UBE4B-206ENST00000466379 GFI1BQ5VTD9 330 aa10.56□□□□□ -0.72
UBE4B-206ENST00000466379 BPIFA4PQ86YQ2 179 aa10.56□□□□□ -0.72
UBE4B-206ENST00000466379 ZNF502Q8TBZ5 544 aa10.56□□□□□ -0.72
UBE4B-206ENST00000466379 TRBV9A0A0B4J1U6 114 aa10.55□□□□□ -0.72
UBE4B-206ENST00000466379 TRAV20A0A0B4J274 112 aa10.55□□□□□ -0.72
UBE4B-206ENST00000466379 IGLC2P0DOY2 106 aa10.55□□□□□ -0.72
UBE4B-206ENST00000466379 IBA57Q5T440 356 aaKnown RBP10.55□□□□□ -0.72
UBE4B-206ENST00000466379 PRR27Q6MZM9 219 aa10.55□□□□□ -0.72
UBE4B-206ENST00000466379 WDR73Q6P4I2 378 aa10.55□□□□□ -0.72
UBE4B-206ENST00000466379 LINC00518Q8N0U6 118 aa10.55□□□□□ -0.72
UBE4B-206ENST00000466379 LINC01356Q8N9X3 169 aa10.55□□□□□ -0.72
UBE4B-206ENST00000466379 C5orf17Q8NAS9 161 aa10.55□□□□□ -0.72
UBE4B-206ENST00000466379 VN1R17PQ8TDU5 208 aa10.55□□□□□ -0.72
UBE4B-206ENST00000466379 ZNF414Q96IQ9 312 aa10.55□□□□□ -0.72
UBE4B-206ENST00000466379 GNB4Q9HAV0 340 aa10.55□□□□□ -0.72
UBE4B-206ENST00000466379 SERTAD4Q9NUC0 356 aa10.55□□□□□ -0.72
UBE4B-206ENST00000466379 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.55□□□□□ -0.72
UBE4B-206ENST00000466379 TRAV41A0A0B4J266 112 aa10.55□□□□□ -0.72
UBE4B-206ENST00000466379 MRPS12O15235 138 aaKnown RBP10.55□□□□□ -0.72
UBE4B-206ENST00000466379 CA1P00915 261 aaPredicted RBP10.55□□□□□ -0.72
UBE4B-206ENST00000466379 TYMSP04818 313 aa10.55□□□□□ -0.72
UBE4B-206ENST00000466379 CLEC3BP05452 202 aa10.55□□□□□ -0.72
UBE4B-206ENST00000466379 TCL1AP56279 114 aa10.55□□□□□ -0.72
UBE4B-206ENST00000466379 TMEM183BQ1AE95 376 aa10.55□□□□□ -0.72
UBE4B-206ENST00000466379 CLEC19AQ6UXS0 136 aa10.55□□□□□ -0.72
UBE4B-206ENST00000466379 OR4F17Q8NGA8 305 aa10.55□□□□□ -0.72
UBE4B-206ENST00000466379 CCDC140Q96MF4 163 aa10.55□□□□□ -0.72
UBE4B-206ENST00000466379 ATG101Q9BSB4 218 aa10.55□□□□□ -0.72
UBE4B-206ENST00000466379 OTORQ9NRC9 128 aa10.55□□□□□ -0.72
UBE4B-206ENST00000466379 TRBV19A0A075B6N1 114 aa10.54□□□□□ -0.72
UBE4B-206ENST00000466379 TRAV8-1A0A0A6YYK1 113 aa10.54□□□□□ -0.72
UBE4B-206ENST00000466379 A6NDX4 124 aa10.54□□□□□ -0.72
UBE4B-206ENST00000466379 SPINK4O60575 86 aa10.54□□□□□ -0.72
UBE4B-206ENST00000466379 TGFAP01135 160 aa10.54□□□□□ -0.72
UBE4B-206ENST00000466379 TCRAP04437 139 aa10.54□□□□□ -0.72
UBE4B-206ENST00000466379 RPEL1Q2QD12 228 aa10.54□□□□□ -0.72
UBE4B-206ENST00000466379 PDZD11Q5EBL8 140 aa10.54□□□□□ -0.72
UBE4B-206ENST00000466379 ACTL10Q5JWF8 245 aa10.54□□□□□ -0.72
UBE4B-206ENST00000466379 Q6ZS46 218 aa10.54□□□□□ -0.72
UBE4B-206ENST00000466379 Q71RC1 249 aaPredicted RBP10.54□□□□□ -0.72
UBE4B-206ENST00000466379 OR8I2Q8N0Y5 310 aa10.54□□□□□ -0.72
UBE4B-206ENST00000466379 OSTCQ9NRP0 149 aa10.54□□□□□ -0.72
UBE4B-206ENST00000466379 PTPN13Q12923 2485 aa10.54□□□□□ -0.72
UBE4B-206ENST00000466379 FRMD6-AS1P0C7T7 363 aa10.54□□□□□ -0.72
UBE4B-206ENST00000466379 HOXA5P20719 270 aa10.54□□□□□ -0.72
UBE4B-206ENST00000466379 RPL15P61313 204 aaKnown RBP10.54□□□□□ -0.72
UBE4B-206ENST00000466379 BLCAPP62952 87 aa10.54□□□□□ -0.72
UBE4B-206ENST00000466379 NOL4LQ96MY1 436 aaPredicted RBP10.54□□□□□ -0.72
UBE4B-206ENST00000466379 TXN2Q99757 166 aa10.54□□□□□ -0.72
UBE4B-206ENST00000466379 TCEAL7Q9BRU2 100 aa10.54□□□□□ -0.72
UBE4B-206ENST00000466379 IFITM10A6NMD0 228 aa10.53□□□□□ -0.72
UBE4B-206ENST00000466379 SLC35B1P78383 322 aa10.53□□□□□ -0.72
UBE4B-206ENST00000466379 GOLT1AQ6ZVE7 132 aa10.53□□□□□ -0.72
UBE4B-206ENST00000466379 ASCL2Q99929 193 aa10.53□□□□□ -0.72
UBE4B-206ENST00000466379 ABCA12Q86UK0 2595 aa10.53□□□□□ -0.72
UBE4B-206ENST00000466379 USP9YO00507 2555 aaPredicted RBP10.53□□□□□ -0.72
UBE4B-206ENST00000466379 ZNF705GA8MUZ8 300 aaPredicted RBP10.53□□□□□ -0.72
UBE4B-206ENST00000466379 KLK9Q2XQG4 91 aa10.53□□□□□ -0.72
UBE4B-206ENST00000466379 C19orf54Q5BKX5 351 aa10.53□□□□□ -0.72
UBE4B-206ENST00000466379 HIST2H2BCQ6DN03 193 aa10.53□□□□□ -0.72
UBE4B-206ENST00000466379 SIGLEC15Q6ZMC9 328 aa10.53□□□□□ -0.72
UBE4B-206ENST00000466379 CMTM2Q8TAZ6 248 aa10.53□□□□□ -0.72
UBE4B-206ENST00000466379 KLK9Q9UKQ9 250 aa10.53□□□□□ -0.72
UBE4B-206ENST00000466379 KLF12Q9Y4X4 402 aa10.53□□□□□ -0.72
UBE4B-206ENST00000466379 TRAPPC1Q9Y5R8 145 aa10.53□□□□□ -0.72
UBE4B-206ENST00000466379 SCGB2A1O75556 95 aa10.52□□□□□ -0.73
UBE4B-206ENST00000466379 GATA3P23771 443 aa10.52□□□□□ -0.73
UBE4B-206ENST00000466379 TOMM20LQ6UXN7 152 aa10.52□□□□□ -0.73
UBE4B-206ENST00000466379 RABAC1Q9UI14 185 aa10.52□□□□□ -0.73
UBE4B-206ENST00000466379 NBPF19A0A087WUL8 3843 aa10.52□□□□□ -0.73
UBE4B-206ENST00000466379 M0R3E3 92 aa10.51□□□□□ -0.73
UBE4B-206ENST00000466379 CBLN1P23435 193 aa10.51□□□□□ -0.73
UBE4B-206ENST00000466379 DEFB113Q30KQ7 82 aa10.51□□□□□ -0.73
UBE4B-206ENST00000466379 DEFB112Q30KQ8 113 aa10.51□□□□□ -0.73
UBE4B-206ENST00000466379 NUDT10Q8NFP7 164 aa10.51□□□□□ -0.73
UBE4B-206ENST00000466379 EEF1AKMT3Q96AZ1 226 aa10.51□□□□□ -0.73
UBE4B-206ENST00000466379 NUDT11Q96G61 164 aa10.51□□□□□ -0.73
UBE4B-206ENST00000466379 FMC1Q96HJ9 113 aa10.51□□□□□ -0.73
UBE4B-206ENST00000466379 ATP5G2Q06055 141 aa10.51□□□□□ -0.73
UBE4B-206ENST00000466379 Q5PR19 223 aa10.51□□□□□ -0.73
UBE4B-206ENST00000466379 GPR82Q96P67 336 aa10.51□□□□□ -0.73
UBE4B-206ENST00000466379 C12orf57Q99622 126 aa10.51□□□□□ -0.73
UBE4B-206ENST00000466379 ZFAND3Q9H8U3 227 aa10.51□□□□□ -0.73
UBE4B-206ENST00000466379 CSPG4Q6UVK1 2322 aa10.51□□□□□ -0.73
UBE4B-206ENST00000466379 ZANQ9Y493 2812 aa10.51□□□□□ -0.73
UBE4B-206ENST00000466379 IGHV3-66A0A0C4DH42 116 aa10.5□□□□□ -0.73
UBE4B-206ENST00000466379 TRGV3P03979 118 aa10.5□□□□□ -0.73
UBE4B-206ENST00000466379 CDX1P47902 265 aaPredicted RBP10.5□□□□□ -0.73
UBE4B-206ENST00000466379 LINC00322Q6ZN03 302 aaPredicted RBP10.5□□□□□ -0.73
UBE4B-206ENST00000466379 PRNTQ86SH4 94 aa10.5□□□□□ -0.73
UBE4B-206ENST00000466379 GPR61Q9BZJ8 451 aa10.5□□□□□ -0.73
UBE4B-206ENST00000466379 CR1P17927 2039 aa10.5□□□□□ -0.73
UBE4B-206ENST00000466379 BMPR1BO00238 502 aa10.5□□□□□ -0.73
UBE4B-206ENST00000466379 ZNF207O43670 478 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms