RNA–Protein interactions for RNA: ENST00000465213.1

VPS8-217, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 656 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-217ENST00000465213 LINC01560Q8TB33 94 aa2.85□□□□□ -1.95
VPS8-217ENST00000465213 DPH3Q96FX2 82 aa2.85□□□□□ -1.95
VPS8-217ENST00000465213 ZC2HC1AQ96GY0 325 aa2.85□□□□□ -1.95
VPS8-217ENST00000465213 CYYR1Q96J86 154 aa2.85□□□□□ -1.95
VPS8-217ENST00000465213 CIB3Q96Q77 187 aaPredicted RBP2.85□□□□□ -1.95
VPS8-217ENST00000465213 SCGB3A1Q96QR1 104 aa2.85□□□□□ -1.95
VPS8-217ENST00000465213 GABARAPL1Q9H0R8 117 aa2.85□□□□□ -1.95
VPS8-217ENST00000465213 SAR1AQ9NR31 198 aa2.85□□□□□ -1.95
VPS8-217ENST00000465213 TXNL4BQ9NX01 149 aaKnown RBP2.85□□□□□ -1.95
VPS8-217ENST00000465213 EPDR1Q9UM22 224 aa2.85□□□□□ -1.95
VPS8-217ENST00000465213 SBF1O95248 1867 aa2.85□□□□□ -1.95
VPS8-217ENST00000465213 FER1L6Q2WGJ9 1857 aa2.85□□□□□ -1.95
VPS8-217ENST00000465213 TICRRQ7Z2Z1 1910 aa2.85□□□□□ -1.95
VPS8-217ENST00000465213 PLXNB3Q9ULL4 1909 aa2.85□□□□□ -1.95
VPS8-217ENST00000465213 DOCK4Q8N1I0 1966 aa2.85□□□□□ -1.95
VPS8-217ENST00000465213 PPRC1Q5VV67 1664 aaKnown RBP2.85□□□□□ -1.95
VPS8-217ENST00000465213 FLNBO75369 2602 aaKnown RBP2.84□□□□□ -1.95
VPS8-217ENST00000465213 KIAA0556O60303 1618 aa2.84□□□□□ -1.95
VPS8-217ENST00000465213 TRAV12-2A0A075B6T6 113 aa2.84□□□□□ -1.95
VPS8-217ENST00000465213 CCDC179H3BU77 68 aa2.84□□□□□ -1.95
VPS8-217ENST00000465213 SLC25A20O43772 301 aa2.84□□□□□ -1.95
VPS8-217ENST00000465213 HRASP01112 189 aa2.84□□□□□ -1.95
VPS8-217ENST00000465213 CD28P10747 220 aa2.84□□□□□ -1.95
VPS8-217ENST00000465213 ZNF19P17023 458 aa2.84□□□□□ -1.95
VPS8-217ENST00000465213 IGLV3-21P80748 117 aaPredicted RBP2.84□□□□□ -1.95
VPS8-217ENST00000465213 SYCNQ0VAF6 134 aa2.84□□□□□ -1.95
VPS8-217ENST00000465213 C7orf65Q6ZTY9 151 aa2.84□□□□□ -1.95
VPS8-217ENST00000465213 KCNRGQ8N5I3 272 aa2.84□□□□□ -1.95
VPS8-217ENST00000465213 LINC00311Q8N616 119 aa2.84□□□□□ -1.95
VPS8-217ENST00000465213 CLDND2Q8NHS1 167 aa2.84□□□□□ -1.95
VPS8-217ENST00000465213 CIRBP-AS1Q8TBR5 109 aa2.84□□□□□ -1.95
VPS8-217ENST00000465213 DIRC1Q969H9 104 aa2.84□□□□□ -1.95
VPS8-217ENST00000465213 NAA38Q9BRA0 125 aaKnown RBP2.84□□□□□ -1.95
VPS8-217ENST00000465213 NPCDR1Q9BY65 106 aa2.84□□□□□ -1.95
VPS8-217ENST00000465213 NAA60Q9H7X0 242 aa2.84□□□□□ -1.95
VPS8-217ENST00000465213 PRO0461Q9UI25 63 aa2.84□□□□□ -1.95
VPS8-217ENST00000465213 TRAPPC1Q9Y5R8 145 aa2.84□□□□□ -1.95
VPS8-217ENST00000465213 ANKRD36BQ8N2N9 1353 aa2.84□□□□□ -1.96
VPS8-217ENST00000465213 AKAP12Q02952 1782 aa2.84□□□□□ -1.96
VPS8-217ENST00000465213 ATAD5Q96QE3 1844 aa2.84□□□□□ -1.96
VPS8-217ENST00000465213 BLMP54132 1417 aaPredicted RBP2.84□□□□□ -1.96
VPS8-217ENST00000465213 ANKRD11Q6UB99 2663 aaPredicted RBP2.84□□□□□ -1.96
VPS8-217ENST00000465213 NLRC5Q86WI3 1866 aa2.84□□□□□ -1.96
VPS8-217ENST00000465213 MAGI1Q96QZ7 1491 aaPredicted RBP2.84□□□□□ -1.96
VPS8-217ENST00000465213 SCAF11Q99590 1463 aaKnown RBP2.84□□□□□ -1.96
VPS8-217ENST00000465213 SCN2AQ99250 2005 aa2.83□□□□□ -1.96
VPS8-217ENST00000465213 ZNF462Q96JM2 2506 aa2.83□□□□□ -1.96
VPS8-217ENST00000465213 CCDC180Q9P1Z9 1646 aa2.83□□□□□ -1.96
VPS8-217ENST00000465213 KLF18A0A0U1RQI7 1052 aa2.83□□□□□ -1.96
VPS8-217ENST00000465213 OR51F1A6NGY5 319 aa2.83□□□□□ -1.96
VPS8-217ENST00000465213 A8MWP4 228 aa2.83□□□□□ -1.96
VPS8-217ENST00000465213 C3orf84H3BNL1 204 aa2.83□□□□□ -1.96
VPS8-217ENST00000465213 YPEL1O60688 119 aa2.83□□□□□ -1.96
VPS8-217ENST00000465213 TCL1BO95988 128 aa2.83□□□□□ -1.96
VPS8-217ENST00000465213 IGHV1-69P01742 117 aa2.83□□□□□ -1.96
VPS8-217ENST00000465213 SLC25A5P05141 298 aaKnown RBP2.83□□□□□ -1.96
VPS8-217ENST00000465213 CD14P08571 375 aa2.83□□□□□ -1.96
VPS8-217ENST00000465213 SLC25A16P16260 332 aa2.83□□□□□ -1.96
VPS8-217ENST00000465213 HLA-DMBP28068 263 aa2.83□□□□□ -1.96
VPS8-217ENST00000465213 S100A10P60903 97 aa2.83□□□□□ -1.96
VPS8-217ENST00000465213 IL17AQ16552 155 aa2.83□□□□□ -1.96
VPS8-217ENST00000465213 MIAQ16674 131 aa2.83□□□□□ -1.96
VPS8-217ENST00000465213 ZNF322Q6U7Q0 402 aaPredicted RBP2.83□□□□□ -1.96
VPS8-217ENST00000465213 ZNF705AQ6ZN79 300 aaPredicted RBP2.83□□□□□ -1.96
VPS8-217ENST00000465213 RPRMLQ8N4K4 120 aa2.83□□□□□ -1.96
VPS8-217ENST00000465213 TTC9CQ8N5M4 171 aa2.83□□□□□ -1.96
VPS8-217ENST00000465213 CNEP1R1Q8N9A8 125 aa2.83□□□□□ -1.96
VPS8-217ENST00000465213 C5orf17Q8NAS9 161 aa2.83□□□□□ -1.96
VPS8-217ENST00000465213 BPIFB6Q8NFQ5 453 aa2.83□□□□□ -1.96
VPS8-217ENST00000465213 LCN9Q8WX39 176 aa2.83□□□□□ -1.96
VPS8-217ENST00000465213 ZNF714Q96N38 554 aa2.83□□□□□ -1.96
VPS8-217ENST00000465213 GINS4Q9BRT9 223 aa2.83□□□□□ -1.96
VPS8-217ENST00000465213 C16orf95Q9H693 158 aa2.83□□□□□ -1.96
VPS8-217ENST00000465213 COMMD3Q9UBI1 195 aa2.83□□□□□ -1.96
VPS8-217ENST00000465213 CHD4Q14839 1912 aa2.83□□□□□ -1.96
VPS8-217ENST00000465213 ATG2AQ2TAZ0 1938 aa2.83□□□□□ -1.96
VPS8-217ENST00000465213 KTN1Q86UP2 1357 aaKnown RBP2.83□□□□□ -1.96
VPS8-217ENST00000465213 ZNFX1Q9P2E3 1918 aaKnown RBP2.83□□□□□ -1.96
VPS8-217ENST00000465213 ZNF638Q14966 1978 aaKnown RBP2.83□□□□□ -1.96
VPS8-217ENST00000465213 USP9XQ93008 2570 aaPredicted RBP2.83□□□□□ -1.96
VPS8-217ENST00000465213 TEX14Q8IWB6 1497 aa2.83□□□□□ -1.96
VPS8-217ENST00000465213 VWDEQ8N2E2 1590 aa2.83□□□□□ -1.96
VPS8-217ENST00000465213 PTPN13Q12923 2485 aa2.82□□□□□ -1.96
VPS8-217ENST00000465213 ANKRD31Q8N7Z5 1873 aa2.82□□□□□ -1.96
VPS8-217ENST00000465213 TRBV20-1A0A075B6N2 111 aa2.82□□□□□ -1.96
VPS8-217ENST00000465213 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.82□□□□□ -1.96
VPS8-217ENST00000465213 LECT2O14960 151 aa2.82□□□□□ -1.96
VPS8-217ENST00000465213 MPC2O95563 127 aa2.82□□□□□ -1.96
VPS8-217ENST00000465213 HBDP02042 147 aa2.82□□□□□ -1.96
VPS8-217ENST00000465213 PMP2P02689 132 aa2.82□□□□□ -1.96
VPS8-217ENST00000465213 IGKV1-16P04430 117 aa2.82□□□□□ -1.96
VPS8-217ENST00000465213 TRGC1P0CF51 173 aa2.82□□□□□ -1.96
VPS8-217ENST00000465213 CATR1Q13166 79 aa2.82□□□□□ -1.96
VPS8-217ENST00000465213 C9orf129Q5T035 196 aaKnown RBP2.82□□□□□ -1.96
VPS8-217ENST00000465213 ZFP2Q6ZN57 461 aa2.82□□□□□ -1.96
VPS8-217ENST00000465213 BPIFA4PQ86YQ2 179 aa2.82□□□□□ -1.96
VPS8-217ENST00000465213 SAXO1Q8IYX7 474 aa2.82□□□□□ -1.96
VPS8-217ENST00000465213 MIR7-3HGQ8N6C7 128 aa2.82□□□□□ -1.96
VPS8-217ENST00000465213 SIGLECL1Q8N7X8 197 aa2.82□□□□□ -1.96
VPS8-217ENST00000465213 SMCR5Q8TEV8 140 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms