RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 ARPC5O15511 151 aa1.16□□□□□ -2.22
CLK1-208ENST00000464454 GTF2A1P52655 376 aaPredicted RBP1.16□□□□□ -2.22
CLK1-208ENST00000464454 PIGPP57054 158 aa1.16□□□□□ -2.22
CLK1-208ENST00000464454 SPCS2Q15005 226 aa1.16□□□□□ -2.22
CLK1-208ENST00000464454 BRMS1LQ5PSV4 323 aa1.16□□□□□ -2.22
CLK1-208ENST00000464454 ANGPTL5Q86XS5 388 aa1.16□□□□□ -2.22
CLK1-208ENST00000464454 OR2T10Q8NGZ9 312 aa1.16□□□□□ -2.22
CLK1-208ENST00000464454 SFT2D1Q8WV19 159 aa1.16□□□□□ -2.22
CLK1-208ENST00000464454 CANT1Q8WVQ1 401 aa1.16□□□□□ -2.22
CLK1-208ENST00000464454 RMND5BQ96G75 393 aaPredicted RBP1.16□□□□□ -2.22
CLK1-208ENST00000464454 GPX7Q96SL4 187 aaPredicted RBP1.16□□□□□ -2.22
CLK1-208ENST00000464454 RASL12Q9NYN1 266 aa1.16□□□□□ -2.22
CLK1-208ENST00000464454 KLK9Q9UKQ9 250 aa1.16□□□□□ -2.22
CLK1-208ENST00000464454 TAF1LQ8IZX4 1826 aa1.16□□□□□ -2.22
CLK1-208ENST00000464454 EML6Q6ZMW3 1958 aa1.16□□□□□ -2.22
CLK1-208ENST00000464454 BCL9O00512 1426 aa1.15□□□□□ -2.22
CLK1-208ENST00000464454 TNRC6BQ9UPQ9 1833 aaKnown RBP1.15□□□□□ -2.22
CLK1-208ENST00000464454 TRAV12-1A0A0B4J245 112 aa1.15□□□□□ -2.23
CLK1-208ENST00000464454 RIIAD1A6NNX1 92 aa1.15□□□□□ -2.23
CLK1-208ENST00000464454 M0QZK8 103 aa1.15□□□□□ -2.23
CLK1-208ENST00000464454 LYZL6O75951 148 aa1.15□□□□□ -2.23
CLK1-208ENST00000464454 RNASE4P34096 147 aaKnown RBP1.15□□□□□ -2.23
CLK1-208ENST00000464454 POLR2HP52434 150 aaKnown RBP1.15□□□□□ -2.23
CLK1-208ENST00000464454 PRR15Q8IV56 129 aa1.15□□□□□ -2.23
CLK1-208ENST00000464454 C3orf56Q8N813 242 aa1.15□□□□□ -2.23
CLK1-208ENST00000464454 ODF3Q96PU9 254 aa1.15□□□□□ -2.23
CLK1-208ENST00000464454 MRPL57Q9BQC6 102 aaKnown RBP1.15□□□□□ -2.23
CLK1-208ENST00000464454 EFCAB11Q9BUY7 163 aa1.15□□□□□ -2.23
CLK1-208ENST00000464454 TMEM126AQ9H061 195 aa1.15□□□□□ -2.23
CLK1-208ENST00000464454 MYH7BA7E2Y1 1941 aa1.15□□□□□ -2.23
CLK1-208ENST00000464454 UHRF1BP1Q6BDS2 1440 aa1.15□□□□□ -2.23
CLK1-208ENST00000464454 BORCS7-ASMTA0A0B4J1R7 106 aa1.14□□□□□ -2.23
CLK1-208ENST00000464454 TRAV3A0A0B4J244 114 aa1.14□□□□□ -2.23
CLK1-208ENST00000464454 EFCAB10A6NFE3 127 aa1.14□□□□□ -2.23
CLK1-208ENST00000464454 CLDN25C9JDP6 229 aa1.14□□□□□ -2.23
CLK1-208ENST00000464454 PFDN1O60925 122 aa1.14□□□□□ -2.23
CLK1-208ENST00000464454 OR10J4P0C629 311 aa1.14□□□□□ -2.23
CLK1-208ENST00000464454 RPS3P23396 243 aaKnown RBP eCLIP1.14□□□□□ -2.23
CLK1-208ENST00000464454 EIF5AP63241 154 aaKnown RBP1.14□□□□□ -2.23
CLK1-208ENST00000464454 ESRGQ1W209 222 aa1.14□□□□□ -2.23
CLK1-208ENST00000464454 C1orf140Q5VVS0 124 aa1.14□□□□□ -2.23
CLK1-208ENST00000464454 FAM24BQ8N5W8 94 aa1.14□□□□□ -2.23
CLK1-208ENST00000464454 LINC00301Q8NCQ3 95 aa1.14□□□□□ -2.23
CLK1-208ENST00000464454 CCDC115Q96NT0 180 aa1.14□□□□□ -2.23
CLK1-208ENST00000464454 AIF1LQ9BQI0 150 aa1.14□□□□□ -2.23
CLK1-208ENST00000464454 CCDC32Q9BV29 185 aa1.14□□□□□ -2.23
CLK1-208ENST00000464454 RIMBP3CA6NJZ7 1639 aa1.14□□□□□ -2.23
CLK1-208ENST00000464454 RIMBP3BA6NNM3 1639 aa1.14□□□□□ -2.23
CLK1-208ENST00000464454 RIMBP3Q9UFD9 1639 aa1.14□□□□□ -2.23
CLK1-208ENST00000464454 OBSL1O75147 1896 aa1.14□□□□□ -2.23
CLK1-208ENST00000464454 ROS1P08922 2347 aa1.14□□□□□ -2.23
CLK1-208ENST00000464454 ARHGEF10O15013 1369 aa1.13□□□□□ -2.23
CLK1-208ENST00000464454 TRAV5A0A0B4J249 113 aa1.13□□□□□ -2.23
CLK1-208ENST00000464454 TLCD2A6NGC4 264 aa1.13□□□□□ -2.23
CLK1-208ENST00000464454 H7BYZ3 331 aa1.13□□□□□ -2.23
CLK1-208ENST00000464454 TAX1BP3O14907 124 aa1.13□□□□□ -2.23
CLK1-208ENST00000464454 NDUFA2O43678 99 aa1.13□□□□□ -2.23
CLK1-208ENST00000464454 FAM107AO95990 144 aa1.13□□□□□ -2.23
CLK1-208ENST00000464454 APOA2P02652 100 aa1.13□□□□□ -2.23
CLK1-208ENST00000464454 SCTP09683 121 aa1.13□□□□□ -2.23
CLK1-208ENST00000464454 BCL2P10415 239 aa1.13□□□□□ -2.23
CLK1-208ENST00000464454 OGNP20774 298 aaKnown RBP1.13□□□□□ -2.23
CLK1-208ENST00000464454 S100GP29377 79 aa1.13□□□□□ -2.23
CLK1-208ENST00000464454 ZNF93P35789 620 aaPredicted RBP1.13□□□□□ -2.23
CLK1-208ENST00000464454 SRP14P37108 136 aaKnown RBP1.13□□□□□ -2.23
CLK1-208ENST00000464454 SMCO1Q147U7 214 aa1.13□□□□□ -2.23
CLK1-208ENST00000464454 MORN2Q502X0 79 aa1.13□□□□□ -2.23
CLK1-208ENST00000464454 SAMD13Q5VXD3 122 aa1.13□□□□□ -2.23
CLK1-208ENST00000464454 MAFIPQ8WZ33 124 aa1.13□□□□□ -2.23
CLK1-208ENST00000464454 ISOC1Q96CN7 298 aa1.13□□□□□ -2.23
CLK1-208ENST00000464454 PBDC1Q9BVG4 233 aa1.13□□□□□ -2.23
CLK1-208ENST00000464454 BCL2L10Q9HD36 194 aa1.13□□□□□ -2.23
CLK1-208ENST00000464454 C14orf132Q9NPU4 83 aa1.13□□□□□ -2.23
CLK1-208ENST00000464454 ASB4Q9Y574 426 aa1.13□□□□□ -2.23
CLK1-208ENST00000464454 CEP192Q8TEP8 1941 aa1.13□□□□□ -2.23
CLK1-208ENST00000464454 CEP152O94986 1710 aa1.12□□□□□ -2.23
CLK1-208ENST00000464454 ARHGEF28Q8N1W1 1705 aaKnown RBP1.12□□□□□ -2.23
CLK1-208ENST00000464454 MED23Q9ULK4 1368 aa1.12□□□□□ -2.23
CLK1-208ENST00000464454 ARHGEF11O15085 1522 aa1.12□□□□□ -2.23
CLK1-208ENST00000464454 LOC110117498A0A087WWA1 95 aa1.12□□□□□ -2.23
CLK1-208ENST00000464454 TRBV6-7A0A0A0MS04 114 aa1.12□□□□□ -2.23
CLK1-208ENST00000464454 TRBV7-6A0A0J9YX20 115 aa1.12□□□□□ -2.23
CLK1-208ENST00000464454 TRDV1A0A1B0GX56 115 aa1.12□□□□□ -2.23
CLK1-208ENST00000464454 DEGS1O15121 323 aa1.12□□□□□ -2.23
CLK1-208ENST00000464454 RPL7P18124 248 aaKnown RBP1.12□□□□□ -2.23
CLK1-208ENST00000464454 SRP9P49458 86 aaKnown RBP1.12□□□□□ -2.23
CLK1-208ENST00000464454 INSL3P51460 131 aa1.12□□□□□ -2.23
CLK1-208ENST00000464454 PSPHP78330 225 aa1.12□□□□□ -2.23
CLK1-208ENST00000464454 Q5XG85 94 aa1.12□□□□□ -2.23
CLK1-208ENST00000464454 C22orf39Q6P5X5 142 aa1.12□□□□□ -2.23
CLK1-208ENST00000464454 SLC30A7Q8NEW0 376 aa1.12□□□□□ -2.23
CLK1-208ENST00000464454 ZNF418Q8TF45 676 aaPredicted RBP1.12□□□□□ -2.23
CLK1-208ENST00000464454 BORCS5Q969J3 196 aa1.12□□□□□ -2.23
CLK1-208ENST00000464454 OR2J1Q9GZK6 312 aa1.12□□□□□ -2.23
CLK1-208ENST00000464454 TPT1P8Q9HAU6 139 aa1.12□□□□□ -2.23
CLK1-208ENST00000464454 LAMTOR2Q9Y2Q5 125 aa1.12□□□□□ -2.23
CLK1-208ENST00000464454 MED31Q9Y3C7 131 aa1.12□□□□□ -2.23
CLK1-208ENST00000464454 TRAV36DV7A0A075B6V5 113 aa1.11□□□□□ -2.23
CLK1-208ENST00000464454 TRGV10A0A0A0MS01 117 aa1.11□□□□□ -2.23
CLK1-208ENST00000464454 TRBV6-8A0A0A6YYG3 113 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms