RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 TNFAIP6P98066 277 aaPredicted RBP5.75□□□□□ -1.49
CLSTN1-204ENST00000464286 SRSF2Q01130 221 aaKnown RBP5.75□□□□□ -1.49
CLSTN1-204ENST00000464286 PDE6HQ13956 83 aa5.75□□□□□ -1.49
CLSTN1-204ENST00000464286 LYRM7Q5U5X0 104 aa5.75□□□□□ -1.49
CLSTN1-204ENST00000464286 TEX36Q5VZQ5 186 aa5.75□□□□□ -1.49
CLSTN1-204ENST00000464286 ZNRF1Q8ND25 227 aa5.75□□□□□ -1.49
CLSTN1-204ENST00000464286 ITLN1Q8WWA0 313 aa5.75□□□□□ -1.49
CLSTN1-204ENST00000464286 SRSF12Q8WXF0 261 aaKnown RBP5.75□□□□□ -1.49
CLSTN1-204ENST00000464286 IFI27L1Q96BM0 104 aa5.75□□□□□ -1.49
CLSTN1-204ENST00000464286 PRELID3AQ96N28 172 aa5.75□□□□□ -1.49
CLSTN1-204ENST00000464286 RNF5Q99942 180 aa5.75□□□□□ -1.49
CLSTN1-204ENST00000464286 HES7Q9BYE0 225 aa5.75□□□□□ -1.49
CLSTN1-204ENST00000464286 FNDC4Q9H6D8 234 aaPredicted RBP5.75□□□□□ -1.49
CLSTN1-204ENST00000464286 AAMDCQ9H7C9 122 aa5.75□□□□□ -1.49
CLSTN1-204ENST00000464286 NXT2Q9NPJ8 142 aaKnown RBP5.75□□□□□ -1.49
CLSTN1-204ENST00000464286 U3KQK5 164 aa5.75□□□□□ -1.49
CLSTN1-204ENST00000464286 LAMA2P24043 3122 aaKnown RBP5.74□□□□□ -1.49
CLSTN1-204ENST00000464286 IGLV3-9A0A075B6K5 115 aa5.74□□□□□ -1.49
CLSTN1-204ENST00000464286 IGKV1D-37A0A075B6S9 117 aa5.74□□□□□ -1.49
CLSTN1-204ENST00000464286 IGHV3OR15-7A0A075B7D8 119 aa5.74□□□□□ -1.49
CLSTN1-204ENST00000464286 H0Y8G0 127 aa5.74□□□□□ -1.49
CLSTN1-204ENST00000464286 PRRG2O14669 202 aa5.74□□□□□ -1.49
CLSTN1-204ENST00000464286 SLC25A17O43808 307 aa5.74□□□□□ -1.49
CLSTN1-204ENST00000464286 AGFG2O95081 481 aa5.74□□□□□ -1.49
CLSTN1-204ENST00000464286 FGF6P10767 208 aa5.74□□□□□ -1.49
CLSTN1-204ENST00000464286 RPL27AP46776 148 aaKnown RBP5.74□□□□□ -1.49
CLSTN1-204ENST00000464286 CCL11P51671 97 aa5.74□□□□□ -1.49
CLSTN1-204ENST00000464286 SRSF6Q13247 344 aaKnown RBP5.74□□□□□ -1.49
CLSTN1-204ENST00000464286 DHRS13Q6UX07 377 aa5.74□□□□□ -1.49
CLSTN1-204ENST00000464286 ZNF841Q6ZN19 808 aa5.74□□□□□ -1.49
CLSTN1-204ENST00000464286 PRNTQ86SH4 94 aa5.74□□□□□ -1.49
CLSTN1-204ENST00000464286 OR8A1Q8NGG7 326 aa5.74□□□□□ -1.49
CLSTN1-204ENST00000464286 SVIPQ8NHG7 77 aa5.74□□□□□ -1.49
CLSTN1-204ENST00000464286 GAFA1Q96PS6 74 aa5.74□□□□□ -1.49
CLSTN1-204ENST00000464286 MRPL20Q9BYC9 149 aaKnown RBP5.74□□□□□ -1.49
CLSTN1-204ENST00000464286 RAB1BQ9H0U4 201 aa5.74□□□□□ -1.49
CLSTN1-204ENST00000464286 MAP1LC3AQ9H492 121 aa5.74□□□□□ -1.49
CLSTN1-204ENST00000464286 NGBQ9NPG2 151 aa5.74□□□□□ -1.49
CLSTN1-204ENST00000464286 THYN1Q9P016 225 aa5.74□□□□□ -1.49
CLSTN1-204ENST00000464286 DYSFO75923 2080 aa5.74□□□□□ -1.49
CLSTN1-204ENST00000464286 DSCAML1Q8TD84 2053 aa5.73□□□□□ -1.49
CLSTN1-204ENST00000464286 MUC6Q6W4X9 2439 aa5.73□□□□□ -1.49
CLSTN1-204ENST00000464286 TRAV17A0A0B4J275 112 aa5.73□□□□□ -1.49
CLSTN1-204ENST00000464286 VWC2LB2RUY7 222 aa5.73□□□□□ -1.49
CLSTN1-204ENST00000464286 LINC01619G3V211 115 aa5.73□□□□□ -1.49
CLSTN1-204ENST00000464286 LAMTOR5O43504 91 aa5.73□□□□□ -1.49
CLSTN1-204ENST00000464286 SPRY3O43610 288 aa5.73□□□□□ -1.49
CLSTN1-204ENST00000464286 IGKV1-16P04430 117 aa5.73□□□□□ -1.49
CLSTN1-204ENST00000464286 CSN3P07498 182 aa5.73□□□□□ -1.49
CLSTN1-204ENST00000464286 UQCRFS1P47985 274 aa5.73□□□□□ -1.49
CLSTN1-204ENST00000464286 WT1-ASQ06250 92 aa5.73□□□□□ -1.49
CLSTN1-204ENST00000464286 TWIST1Q15672 202 aa5.73□□□□□ -1.49
CLSTN1-204ENST00000464286 CD300EQ496F6 205 aaPredicted RBP5.73□□□□□ -1.49
CLSTN1-204ENST00000464286 FAM104BQ5XKR9 115 aa5.73□□□□□ -1.49
CLSTN1-204ENST00000464286 ADAMTSL5Q6ZMM2 481 aa5.73□□□□□ -1.49
CLSTN1-204ENST00000464286 Q6ZS92 163 aa5.73□□□□□ -1.49
CLSTN1-204ENST00000464286 GOLT1AQ6ZVE7 132 aa5.73□□□□□ -1.49
CLSTN1-204ENST00000464286 MOB3BQ86TA1 216 aa5.73□□□□□ -1.49
CLSTN1-204ENST00000464286 TDHQ8IZJ6 230 aa5.73□□□□□ -1.49
CLSTN1-204ENST00000464286 OR10W1Q8NGF6 305 aa5.73□□□□□ -1.49
CLSTN1-204ENST00000464286 ARPC1AQ92747 370 aa5.73□□□□□ -1.49
CLSTN1-204ENST00000464286 LEAP2Q969E1 77 aa5.73□□□□□ -1.49
CLSTN1-204ENST00000464286 RASL11BQ9BPW5 248 aa5.73□□□□□ -1.49
CLSTN1-204ENST00000464286 KRTAP4-2Q9BYR5 136 aa5.73□□□□□ -1.49
CLSTN1-204ENST00000464286 ZNF71Q9NQZ8 489 aaPredicted RBP5.73□□□□□ -1.49
CLSTN1-204ENST00000464286 PSG8Q9UQ74 426 aa5.73□□□□□ -1.49
CLSTN1-204ENST00000464286 SLC25A15Q9Y619 301 aa5.73□□□□□ -1.49
CLSTN1-204ENST00000464286 R4GN57 208 aa5.73□□□□□ -1.49
CLSTN1-204ENST00000464286 NDUFB3O43676 98 aa5.72□□□□□ -1.49
CLSTN1-204ENST00000464286 IGHV3-7P01780 117 aa5.72□□□□□ -1.49
CLSTN1-204ENST00000464286 CD3EP07766 207 aa5.72□□□□□ -1.49
CLSTN1-204ENST00000464286 CKS2P33552 79 aa5.72□□□□□ -1.49
CLSTN1-204ENST00000464286 RIPPLY3P57055 190 aa5.72□□□□□ -1.49
CLSTN1-204ENST00000464286 CACNG7P62955 275 aa5.72□□□□□ -1.49
CLSTN1-204ENST00000464286 RPL24P83731 157 aaKnown RBP5.72□□□□□ -1.49
CLSTN1-204ENST00000464286 MORN5Q5VZ52 161 aa5.72□□□□□ -1.49
CLSTN1-204ENST00000464286 LINC00173Q6ZV60 143 aa5.72□□□□□ -1.49
CLSTN1-204ENST00000464286 COX8CQ7Z4L0 72 aa5.72□□□□□ -1.49
CLSTN1-204ENST00000464286 ZNF502Q8TBZ5 544 aa5.72□□□□□ -1.49
CLSTN1-204ENST00000464286 VGLL1Q99990 258 aa5.72□□□□□ -1.49
CLSTN1-204ENST00000464286 SHANK2-AS3Q9BTD1 123 aa5.72□□□□□ -1.49
CLSTN1-204ENST00000464286 TM2D2Q9BX73 214 aa5.72□□□□□ -1.49
CLSTN1-204ENST00000464286 FZR1Q9UM11 496 aa5.72□□□□□ -1.49
CLSTN1-204ENST00000464286 TIMM8BQ9Y5J9 83 aaPredicted RBP5.72□□□□□ -1.49
CLSTN1-204ENST00000464286 F11RQ9Y624 299 aaKnown RBP5.72□□□□□ -1.49
CLSTN1-204ENST00000464286 CHD8Q9HCK8 2581 aa5.72□□□□□ -1.49
CLSTN1-204ENST00000464286 BRWD1Q9NSI6 2320 aa5.71□□□□□ -1.49
CLSTN1-204ENST00000464286 TRBV19A0A075B6N1 114 aa5.71□□□□□ -1.5
CLSTN1-204ENST00000464286 A0A1W2PPI3 338 aa5.71□□□□□ -1.5
CLSTN1-204ENST00000464286 LINC01546A6NGU7 62 aa5.71□□□□□ -1.5
CLSTN1-204ENST00000464286 M0R1B8 84 aa5.71□□□□□ -1.5
CLSTN1-204ENST00000464286 CEACAM4O75871 244 aa5.71□□□□□ -1.5
CLSTN1-204ENST00000464286 DPM2O94777 84 aa5.71□□□□□ -1.5
CLSTN1-204ENST00000464286 TFF1P04155 84 aa5.71□□□□□ -1.5
CLSTN1-204ENST00000464286 MYOD1P15172 320 aa5.71□□□□□ -1.5
CLSTN1-204ENST00000464286 EVI2AP22794 236 aa5.71□□□□□ -1.5
CLSTN1-204ENST00000464286 FCER1GP30273 86 aa5.71□□□□□ -1.5
CLSTN1-204ENST00000464286 NMUP48645 174 aa5.71□□□□□ -1.5
CLSTN1-204ENST00000464286 TCTAP57738 103 aa5.71□□□□□ -1.5
CLSTN1-204ENST00000464286 LYZP61626 148 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms