RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 IGKV3D-20A0A0C4DH25 116 aa7.4□□□□□ -1.23
SHROOM4-203ENST00000460112 C17orf98A8MV24 154 aa7.4□□□□□ -1.23
SHROOM4-203ENST00000460112 TEX38Q6PEX7 206 aa7.4□□□□□ -1.23
SHROOM4-203ENST00000460112 MIR17HGQ75NE6 70 aa7.4□□□□□ -1.23
SHROOM4-203ENST00000460112 HIST3H2BBQ8N257 126 aa7.4□□□□□ -1.23
SHROOM4-203ENST00000460112 SPSB2Q99619 263 aa7.4□□□□□ -1.23
SHROOM4-203ENST00000460112 ANAPC10Q9UM13 185 aa7.4□□□□□ -1.23
SHROOM4-203ENST00000460112 FAM231BA6NCW3 169 aa7.4□□□□□ -1.23
SHROOM4-203ENST00000460112 FAM19A2Q8N3H0 131 aa7.4□□□□□ -1.23
SHROOM4-203ENST00000460112 C9orf139Q6ZV77 190 aa7.39□□□□□ -1.23
SHROOM4-203ENST00000460112 AMBPP02760 352 aa7.39□□□□□ -1.23
SHROOM4-203ENST00000460112 CSRP1P21291 193 aaKnown RBP7.39□□□□□ -1.23
SHROOM4-203ENST00000460112 A0A0G2JK05 382 aa7.39□□□□□ -1.23
SHROOM4-203ENST00000460112 IFITM1P13164 125 aa7.39□□□□□ -1.23
SHROOM4-203ENST00000460112 M0R1W7 72 aa7.39□□□□□ -1.23
SHROOM4-203ENST00000460112 HIST1H4AP62805 103 aaKnown RBP7.39□□□□□ -1.23
SHROOM4-203ENST00000460112 FAM90A2PQ658T7 463 aa7.39□□□□□ -1.23
SHROOM4-203ENST00000460112 NEGR1Q7Z3B1 354 aa7.39□□□□□ -1.23
SHROOM4-203ENST00000460112 C18orf12Q96KH6 178 aa7.39□□□□□ -1.23
SHROOM4-203ENST00000460112 LINC00477Q96M19 166 aa7.39□□□□□ -1.23
SHROOM4-203ENST00000460112 IGHV3-48P01763 117 aa7.39□□□□□ -1.23
SHROOM4-203ENST00000460112 ATRAIDQ6UW56 229 aa7.39□□□□□ -1.23
SHROOM4-203ENST00000460112 AMELYQ99218 206 aa7.39□□□□□ -1.23
SHROOM4-203ENST00000460112 TRBV20-1A0A075B6N2 111 aa7.38□□□□□ -1.23
SHROOM4-203ENST00000460112 B4DSR2 109 aa7.38□□□□□ -1.23
SHROOM4-203ENST00000460112 VCYO14598 125 aa7.38□□□□□ -1.23
SHROOM4-203ENST00000460112 E9PQ18 207 aa7.38□□□□□ -1.23
SHROOM4-203ENST00000460112 PSG8Q9UQ74 426 aa7.38□□□□□ -1.23
SHROOM4-203ENST00000460112 PSG1P11464 419 aa7.38□□□□□ -1.23
SHROOM4-203ENST00000460112 MUC21Q5SSG8 566 aa7.38□□□□□ -1.23
SHROOM4-203ENST00000460112 NOTCH2Q04721 2471 aa7.38□□□□□ -1.23
SHROOM4-203ENST00000460112 TLN2Q9Y4G6 2542 aa7.38□□□□□ -1.23
SHROOM4-203ENST00000460112 IGLV3-19P01714 112 aa7.38□□□□□ -1.23
SHROOM4-203ENST00000460112 IGHV1-2P23083 117 aa7.38□□□□□ -1.23
SHROOM4-203ENST00000460112 FAM27E3Q08E93 113 aa7.38□□□□□ -1.23
SHROOM4-203ENST00000460112 MBNL3Q9NUK0 354 aaKnown RBP7.38□□□□□ -1.23
SHROOM4-203ENST00000460112 EFNA4P52798 201 aa7.38□□□□□ -1.23
SHROOM4-203ENST00000460112 SRSF2Q01130 221 aaKnown RBP7.38□□□□□ -1.23
SHROOM4-203ENST00000460112 PDE6HQ13956 83 aa7.38□□□□□ -1.23
SHROOM4-203ENST00000460112 TRBV6-6A0A0A6YYG2 114 aa7.38□□□□□ -1.23
SHROOM4-203ENST00000460112 J3QRE1 110 aa7.38□□□□□ -1.23
SHROOM4-203ENST00000460112 RAMP1O60894 148 aa7.38□□□□□ -1.23
SHROOM4-203ENST00000460112 GATA3P23771 443 aa7.38□□□□□ -1.23
SHROOM4-203ENST00000460112 BMPERQ8N8U9 685 aa7.38□□□□□ -1.23
SHROOM4-203ENST00000460112 IFI27L1Q96BM0 104 aa7.38□□□□□ -1.23
SHROOM4-203ENST00000460112 CFHR1Q03591 330 aa7.38□□□□□ -1.23
SHROOM4-203ENST00000460112 ZNF525Q8N782 197 aa7.38□□□□□ -1.23
SHROOM4-203ENST00000460112 TRGV1A0A0A0MS02 117 aa7.37□□□□□ -1.23
SHROOM4-203ENST00000460112 INS-IGF2F8WCM5 200 aa7.37□□□□□ -1.23
SHROOM4-203ENST00000460112 MORN2Q502X0 79 aa7.37□□□□□ -1.23
SHROOM4-203ENST00000460112 GPR179Q6PRD1 2367 aa7.37□□□□□ -1.23
SHROOM4-203ENST00000460112 NKAPP1Q8N9T2 125 aa7.37□□□□□ -1.23
SHROOM4-203ENST00000460112 C1orf43Q9BWL3 253 aa7.37□□□□□ -1.23
SHROOM4-203ENST00000460112 PIN1P1O15428 100 aa7.37□□□□□ -1.23
SHROOM4-203ENST00000460112 SLC25A16P16260 332 aa7.37□□□□□ -1.23
SHROOM4-203ENST00000460112 SPATA31B1PQ5VZV4 182 aa7.37□□□□□ -1.23
SHROOM4-203ENST00000460112 TRGV9Q99603 122 aa7.37□□□□□ -1.23
SHROOM4-203ENST00000460112 GFRA4Q9GZZ7 299 aa7.37□□□□□ -1.23
SHROOM4-203ENST00000460112 TET2Q6N021 2002 aaPredicted RBP7.37□□□□□ -1.23
SHROOM4-203ENST00000460112 LYL1P12980 280 aa7.37□□□□□ -1.23
SHROOM4-203ENST00000460112 CRYBA2P53672 197 aa7.37□□□□□ -1.23
SHROOM4-203ENST00000460112 GGTLC1Q9BX51 225 aa7.37□□□□□ -1.23
SHROOM4-203ENST00000460112 SNHG12Q9BXW3 62 aa7.37□□□□□ -1.23
SHROOM4-203ENST00000460112 TRAV40A0A0B4J280 105 aa7.37□□□□□ -1.23
SHROOM4-203ENST00000460112 C6orf226Q5I0X4 101 aa7.37□□□□□ -1.23
SHROOM4-203ENST00000460112 S4R3C0 116 aa7.37□□□□□ -1.23
SHROOM4-203ENST00000460112 ID3Q02535 119 aa7.36□□□□□ -1.23
SHROOM4-203ENST00000460112 C15orf32Q32M92 178 aa7.36□□□□□ -1.23
SHROOM4-203ENST00000460112 LINC01545Q5VT33 79 aa7.36□□□□□ -1.23
SHROOM4-203ENST00000460112 NRTNQ99748 197 aa7.36□□□□□ -1.23
SHROOM4-203ENST00000460112 MCRIP2Q9BUT9 160 aaKnown RBP7.36□□□□□ -1.23
SHROOM4-203ENST00000460112 ZIC3O60481 467 aa7.36□□□□□ -1.23
SHROOM4-203ENST00000460112 TRACP01848 142 aa7.36□□□□□ -1.23
SHROOM4-203ENST00000460112 ATP1A1-AS1Q5TC04 95 aa7.36□□□□□ -1.23
SHROOM4-203ENST00000460112 GLMPQ8WWB7 406 aa7.36□□□□□ -1.23
SHROOM4-203ENST00000460112 A0A1B0GWJ7 208 aa7.36□□□□□ -1.23
SHROOM4-203ENST00000460112 TIMP3P35625 211 aa7.36□□□□□ -1.23
SHROOM4-203ENST00000460112 KLF17Q5JT82 389 aaPredicted RBP7.36□□□□□ -1.23
SHROOM4-203ENST00000460112 VMO1Q7Z5L0 202 aa7.36□□□□□ -1.23
SHROOM4-203ENST00000460112 TIMM21Q9BVV7 248 aa7.36□□□□□ -1.23
SHROOM4-203ENST00000460112 K7EMI3 77 aa7.36□□□□□ -1.23
SHROOM4-203ENST00000460112 GNG5P63218 68 aa7.36□□□□□ -1.23
SHROOM4-203ENST00000460112 PSG7Q13046 419 aa7.36□□□□□ -1.23
SHROOM4-203ENST00000460112 ZNF561-AS1K7EIQ3 104 aa7.35□□□□□ -1.23
SHROOM4-203ENST00000460112 NDUFC2O95298 119 aa7.35□□□□□ -1.23
SHROOM4-203ENST00000460112 LHX2P50458 406 aa7.35□□□□□ -1.23
SHROOM4-203ENST00000460112 LINC01356Q8N9X3 169 aa7.35□□□□□ -1.23
SHROOM4-203ENST00000460112 TLN1Q9Y490 2541 aaKnown RBP7.35□□□□□ -1.23
SHROOM4-203ENST00000460112 A8MWP6 167 aa7.35□□□□□ -1.23
SHROOM4-203ENST00000460112 ATP5G3P48201 142 aa7.35□□□□□ -1.23
SHROOM4-203ENST00000460112 LCN12Q6JVE5 192 aa7.35□□□□□ -1.23
SHROOM4-203ENST00000460112 C2orf82Q6UX34 121 aa7.35□□□□□ -1.23
SHROOM4-203ENST00000460112 RTBDNQ9BSG5 229 aaPredicted RBP7.35□□□□□ -1.23
SHROOM4-203ENST00000460112 ZNF138P52744 262 aa7.35□□□□□ -1.23
SHROOM4-203ENST00000460112 DEFB121Q5J5C9 76 aa7.35□□□□□ -1.23
SHROOM4-203ENST00000460112 SFTA2Q6UW10 78 aa7.35□□□□□ -1.23
SHROOM4-203ENST00000460112 SPRED2Q7Z698 418 aa7.35□□□□□ -1.23
SHROOM4-203ENST00000460112 CDKN1AP38936 164 aa7.35□□□□□ -1.23
SHROOM4-203ENST00000460112 ADAMTSL5Q6ZMM2 481 aa7.35□□□□□ -1.23
SHROOM4-203ENST00000460112 GPHA2Q96T91 129 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms