RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 A0A087WSZ3 146 aa-0.06□□□□□ -2.42
SCARNA18-201ENST00000459004 TRAV4A0A0B4J268 109 aa-0.06□□□□□ -2.42
SCARNA18-201ENST00000459004 NUPR2A6NF83 97 aa-0.06□□□□□ -2.42
SCARNA18-201ENST00000459004 JMJD7-PLA2G4BH0Y9G9 81 aa-0.06□□□□□ -2.42
SCARNA18-201ENST00000459004 RPP14O95059 124 aaKnown RBP-0.06□□□□□ -2.42
SCARNA18-201ENST00000459004 PPYP01298 95 aa-0.06□□□□□ -2.42
SCARNA18-201ENST00000459004 MYL5Q02045 173 aa-0.06□□□□□ -2.42
SCARNA18-201ENST00000459004 RRN3P1Q2M238 152 aa-0.06□□□□□ -2.42
SCARNA18-201ENST00000459004 TMEM97Q5BJF2 176 aa-0.06□□□□□ -2.42
SCARNA18-201ENST00000459004 BCL2L15Q5TBC7 163 aa-0.06□□□□□ -2.42
SCARNA18-201ENST00000459004 GLIPR1L1Q6UWM5 242 aa-0.06□□□□□ -2.42
SCARNA18-201ENST00000459004 OR5AS1Q8N127 324 aa-0.06□□□□□ -2.42
SCARNA18-201ENST00000459004 NABP2Q9BQ15 211 aa-0.06□□□□□ -2.42
SCARNA18-201ENST00000459004 SPRR2GQ9BYE4 73 aa-0.06□□□□□ -2.42
SCARNA18-201ENST00000459004 PARD6GQ9BYG4 376 aaPredicted RBP-0.06□□□□□ -2.42
SCARNA18-201ENST00000459004 TRBV30A0A0K0K1B3 111 aa-0.07□□□□□ -2.42
SCARNA18-201ENST00000459004 B4DSR2 109 aa-0.07□□□□□ -2.42
SCARNA18-201ENST00000459004 C5orf67F2Z3F1 127 aa-0.07□□□□□ -2.42
SCARNA18-201ENST00000459004 C17orf112F2Z3M2 114 aa-0.07□□□□□ -2.42
SCARNA18-201ENST00000459004 LYPLA2O95372 231 aa-0.07□□□□□ -2.42
SCARNA18-201ENST00000459004 RPS17P08708 135 aaKnown RBP-0.07□□□□□ -2.42
SCARNA18-201ENST00000459004 CEBPGP53567 150 aa-0.07□□□□□ -2.42
SCARNA18-201ENST00000459004 CDK6Q00534 326 aa-0.07□□□□□ -2.42
SCARNA18-201ENST00000459004 AESQ08117 197 aa-0.07□□□□□ -2.42
SCARNA18-201ENST00000459004 PTRHD1Q6GMV3 140 aaKnown RBP-0.07□□□□□ -2.42
SCARNA18-201ENST00000459004 SPINK6Q6UWN8 80 aa-0.07□□□□□ -2.42
SCARNA18-201ENST00000459004 CCDC94Q9BW85 323 aaPredicted RBP-0.07□□□□□ -2.42
SCARNA18-201ENST00000459004 HSPB8Q9UJY1 196 aa-0.07□□□□□ -2.42
SCARNA18-201ENST00000459004 MED12Q93074 2177 aa-0.07□□□□□ -2.42
SCARNA18-201ENST00000459004 NAV2Q8IVL1 2488 aa-0.07□□□□□ -2.42
SCARNA18-201ENST00000459004 FAT1Q14517 4588 aa-0.07□□□□□ -2.42
SCARNA18-201ENST00000459004 STARD9Q9P2P6 4700 aa-0.07□□□□□ -2.42
SCARNA18-201ENST00000459004 MYO18AQ92614 2054 aaKnown RBP-0.07□□□□□ -2.42
SCARNA18-201ENST00000459004 RFX7Q2KHR2 1363 aa-0.07□□□□□ -2.42
SCARNA18-201ENST00000459004 STAB1Q9NY15 2570 aa-0.07□□□□□ -2.42
SCARNA18-201ENST00000459004 PTPRFP10586 1907 aa-0.08□□□□□ -2.42
SCARNA18-201ENST00000459004 TRBV19A0A075B6N1 114 aa-0.08□□□□□ -2.42
SCARNA18-201ENST00000459004 M0R233 179 aa-0.08□□□□□ -2.42
SCARNA18-201ENST00000459004 ERP29P30040 261 aaKnown RBP-0.08□□□□□ -2.42
SCARNA18-201ENST00000459004 OR10AG1Q8NH19 301 aa-0.08□□□□□ -2.42
SCARNA18-201ENST00000459004 GNPDA2Q8TDQ7 276 aa-0.08□□□□□ -2.42
SCARNA18-201ENST00000459004 OR52A1Q9UKL2 312 aa-0.08□□□□□ -2.42
SCARNA18-201ENST00000459004 RNF11Q9Y3C5 154 aa-0.08□□□□□ -2.42
SCARNA18-201ENST00000459004 CCDC144AA2RUR9 1427 aa-0.08□□□□□ -2.42
SCARNA18-201ENST00000459004 BCL9O00512 1426 aa-0.08□□□□□ -2.42
SCARNA18-201ENST00000459004 ERBINQ96RT1 1412 aa-0.09□□□□□ -2.42
SCARNA18-201ENST00000459004 TRAV23DV6A0A075B6W5 121 aa-0.09□□□□□ -2.42
SCARNA18-201ENST00000459004 GGCTO75223 188 aaKnown RBP-0.09□□□□□ -2.42
SCARNA18-201ENST00000459004 OR7C1O76099 320 aaPredicted RBP-0.09□□□□□ -2.42
SCARNA18-201ENST00000459004 HAND1O96004 215 aa-0.09□□□□□ -2.42
SCARNA18-201ENST00000459004 CCL4P13236 92 aa-0.09□□□□□ -2.42
SCARNA18-201ENST00000459004 LSM6P62312 80 aaKnown RBP-0.09□□□□□ -2.42
SCARNA18-201ENST00000459004 UBE2BP63146 152 aa-0.09□□□□□ -2.42
SCARNA18-201ENST00000459004 C1orf134Q5TEV5 83 aa-0.09□□□□□ -2.42
SCARNA18-201ENST00000459004 POP5Q969H6 163 aaKnown RBP-0.09□□□□□ -2.42
SCARNA18-201ENST00000459004 RAB37Q96AX2 223 aa-0.09□□□□□ -2.42
SCARNA18-201ENST00000459004 GGACTQ9BVM4 153 aa-0.09□□□□□ -2.42
SCARNA18-201ENST00000459004 IMUPQ9GZP8 106 aa-0.09□□□□□ -2.42
SCARNA18-201ENST00000459004 PARVBQ9HBI1 364 aa-0.09□□□□□ -2.42
SCARNA18-201ENST00000459004 ADCY9O60503 1353 aa-0.09□□□□□ -2.42
SCARNA18-201ENST00000459004 DNHD1Q96M86 4753 aa-0.09□□□□□ -2.42
SCARNA18-201ENST00000459004 HIVEP1P15822 2718 aa-0.09□□□□□ -2.42
SCARNA18-201ENST00000459004 BSNQ9UPA5 3926 aa-0.09□□□□□ -2.42
SCARNA18-201ENST00000459004 CHD3Q12873 2000 aaKnown RBP-0.09□□□□□ -2.42
SCARNA18-201ENST00000459004 HEATR1Q9H583 2144 aaKnown RBP-0.1□□□□□ -2.42
SCARNA18-201ENST00000459004 COL24A1Q17RW2 1714 aa-0.1□□□□□ -2.42
SCARNA18-201ENST00000459004 BIRC6Q9NR09 4857 aa-0.1□□□□□ -2.42
SCARNA18-201ENST00000459004 SCN8AQ9UQD0 1980 aa-0.1□□□□□ -2.42
SCARNA18-201ENST00000459004 NUP98P52948 1817 aa-0.1□□□□□ -2.43
SCARNA18-201ENST00000459004 LRP2P98164 4655 aa-0.1□□□□□ -2.43
SCARNA18-201ENST00000459004 TAX1BP3O14907 124 aa-0.1□□□□□ -2.43
SCARNA18-201ENST00000459004 TCRBP04435 133 aa-0.1□□□□□ -2.43
SCARNA18-201ENST00000459004 OR10J4P0C629 311 aa-0.1□□□□□ -2.43
SCARNA18-201ENST00000459004 ATP5G3P48201 142 aa-0.1□□□□□ -2.43
SCARNA18-201ENST00000459004 SERPINB9P50453 376 aa-0.1□□□□□ -2.43
SCARNA18-201ENST00000459004 QRFPP83859 136 aa-0.1□□□□□ -2.43
SCARNA18-201ENST00000459004 COL7A1Q02388 2944 aa-0.1□□□□□ -2.43
SCARNA18-201ENST00000459004 MGAMO43451 1857 aa-0.1□□□□□ -2.43
SCARNA18-201ENST00000459004 FANCMQ8IYD8 2048 aa-0.11□□□□□ -2.43
SCARNA18-201ENST00000459004 UBR2Q8IWV8 1755 aa-0.11□□□□□ -2.43
SCARNA18-201ENST00000459004 ASCC3Q8N3C0 2202 aaKnown RBP-0.11□□□□□ -2.43
SCARNA18-201ENST00000459004 TRAV27A0A087WT01 109 aa-0.11□□□□□ -2.43
SCARNA18-201ENST00000459004 ZNF727A8MUV8 499 aa-0.11□□□□□ -2.43
SCARNA18-201ENST00000459004 NIPSNAP2O75323 286 aa-0.11□□□□□ -2.43
SCARNA18-201ENST00000459004 IFNA7P01567 189 aa-0.11□□□□□ -2.43
SCARNA18-201ENST00000459004 IGLV1-51P01701 117 aa-0.11□□□□□ -2.43
SCARNA18-201ENST00000459004 CD14P08571 375 aa-0.11□□□□□ -2.43
SCARNA18-201ENST00000459004 HLA-EP13747 358 aa-0.11□□□□□ -2.43
SCARNA18-201ENST00000459004 MYL6P60660 151 aa-0.11□□□□□ -2.43
SCARNA18-201ENST00000459004 EIF5AL1Q6IS14 154 aaKnown RBP-0.11□□□□□ -2.43
SCARNA18-201ENST00000459004 OTUD6BQ8N6M0 293 aa-0.11□□□□□ -2.43
SCARNA18-201ENST00000459004 OR5D16Q8NGK9 328 aa-0.11□□□□□ -2.43
SCARNA18-201ENST00000459004 TEX37Q96LM6 180 aa-0.11□□□□□ -2.43
SCARNA18-201ENST00000459004 KIFC1Q9BW19 673 aa-0.11□□□□□ -2.43
SCARNA18-201ENST00000459004 NPCDR1Q9BY65 106 aa-0.11□□□□□ -2.43
SCARNA18-201ENST00000459004 TCEAL2Q9H3H9 227 aaPredicted RBP-0.11□□□□□ -2.43
SCARNA18-201ENST00000459004 TENM4Q6N022 2769 aa-0.11□□□□□ -2.43
SCARNA18-201ENST00000459004 PLB1Q6P1J6 1458 aa-0.11□□□□□ -2.43
SCARNA18-201ENST00000459004 BPTFQ12830 3046 aa-0.11□□□□□ -2.43
SCARNA18-201ENST00000459004 MUC4Q99102 2169 aa-0.12□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms