RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 WFDC3Q8IUB2 231 aa13.2□□□□□ -0.3
LSS-205ENST00000457828 GAFA1Q96PS6 74 aa13.2□□□□□ -0.3
LSS-205ENST00000457828 RNASE2P10153 161 aaKnown RBP13.2□□□□□ -0.3
LSS-205ENST00000457828 CKS2P33552 79 aa13.2□□□□□ -0.3
LSS-205ENST00000457828 C11orf53Q8IXP5 236 aa13.2□□□□□ -0.3
LSS-205ENST00000457828 Q96MF0 132 aa13.2□□□□□ -0.3
LSS-205ENST00000457828 TMEM14BQ9NUH8 114 aa13.2□□□□□ -0.3
LSS-205ENST00000457828 RABAC1Q9UI14 185 aa13.2□□□□□ -0.3
LSS-205ENST00000457828 A0A1B0GUT8 65 aa13.19□□□□□ -0.3
LSS-205ENST00000457828 TMEM189A5PLL7 270 aa13.19□□□□□ -0.3
LSS-205ENST00000457828 TIMM23O14925 209 aa13.19□□□□□ -0.3
LSS-205ENST00000457828 TWIST1Q15672 202 aa13.19□□□□□ -0.3
LSS-205ENST00000457828 UFC1Q9Y3C8 167 aa13.19□□□□□ -0.3
LSS-205ENST00000457828 LRP4O75096 1905 aa13.19□□□□□ -0.3
LSS-205ENST00000457828 TM4SF20Q53R12 229 aa13.19□□□□□ -0.3
LSS-205ENST00000457828 CPAMD8Q8IZJ3 1885 aa13.19□□□□□ -0.3
LSS-205ENST00000457828 IGLV3-9A0A075B6K5 115 aa13.18□□□□□ -0.3
LSS-205ENST00000457828 IGHV1-8P0DP01 117 aa13.18□□□□□ -0.3
LSS-205ENST00000457828 DNAH14Q0VDD8 3507 aa13.18□□□□□ -0.3
LSS-205ENST00000457828 IL4P05112 153 aa13.18□□□□□ -0.3
LSS-205ENST00000457828 WNT2P09544 360 aa13.18□□□□□ -0.3
LSS-205ENST00000457828 VMO1Q7Z5L0 202 aa13.18□□□□□ -0.3
LSS-205ENST00000457828 SHISA9B4DS77 424 aa13.18□□□□□ -0.3
LSS-205ENST00000457828 C11orf52Q96A22 123 aa13.18□□□□□ -0.3
LSS-205ENST00000457828 C18orf15Q96N68 181 aa13.18□□□□□ -0.3
LSS-205ENST00000457828 WNK1Q9H4A3 2382 aa13.17□□□□□ -0.3
LSS-205ENST00000457828 OR4A5Q8NH83 315 aa13.17□□□□□ -0.3
LSS-205ENST00000457828 ASCL2Q99929 193 aa13.17□□□□□ -0.3
LSS-205ENST00000457828 IGHV2-26A0A0B4J1V2 119 aa13.17□□□□□ -0.3
LSS-205ENST00000457828 BRWD1-AS2P59051 145 aa13.17□□□□□ -0.3
LSS-205ENST00000457828 CIARTQ8N365 385 aaPredicted RBP13.17□□□□□ -0.3
LSS-205ENST00000457828 NRGNQ92686 78 aa13.17□□□□□ -0.3
LSS-205ENST00000457828 NDUFS8O00217 210 aa13.17□□□□□ -0.3
LSS-205ENST00000457828 MMP23AO75900 390 aa13.17□□□□□ -0.3
LSS-205ENST00000457828 GCSHP23434 173 aa13.17□□□□□ -0.3
LSS-205ENST00000457828 TMEM155Q4W5P6 130 aa13.17□□□□□ -0.3
LSS-205ENST00000457828 J3KRW8 73 aa13.16□□□□□ -0.3
LSS-205ENST00000457828 UBE2V1Q13404 147 aa13.16□□□□□ -0.3
LSS-205ENST00000457828 MRPL52Q86TS9 123 aaKnown RBP13.16□□□□□ -0.3
LSS-205ENST00000457828 EXOC3-AS1Q8N2X6 119 aa13.16□□□□□ -0.3
LSS-205ENST00000457828 MRPL27Q9P0M9 148 aaKnown RBP13.16□□□□□ -0.3
LSS-205ENST00000457828 TMEM116Q8NCL8 245 aa13.16□□□□□ -0.3
LSS-205ENST00000457828 FMC1Q96HJ9 113 aa13.16□□□□□ -0.3
LSS-205ENST00000457828 NAA38Q9BRA0 125 aaKnown RBP13.16□□□□□ -0.3
LSS-205ENST00000457828 NPFFR1Q9GZQ6 430 aa13.16□□□□□ -0.3
LSS-205ENST00000457828 IGHV3OR16-8A0A075B7F1 116 aa13.16□□□□□ -0.3
LSS-205ENST00000457828 PRR20EP86478 221 aa13.16□□□□□ -0.3
LSS-205ENST00000457828 PRR20CP86479 221 aa13.16□□□□□ -0.3
LSS-205ENST00000457828 PRR20DP86480 221 aa13.16□□□□□ -0.3
LSS-205ENST00000457828 PRR20BP86481 221 aa13.16□□□□□ -0.3
LSS-205ENST00000457828 PRR20AP86496 221 aa13.16□□□□□ -0.3
LSS-205ENST00000457828 AMMECR1LQ6DCA0 310 aa13.16□□□□□ -0.3
LSS-205ENST00000457828 LSM4Q9Y4Z0 139 aaKnown RBP13.16□□□□□ -0.3
LSS-205ENST00000457828 TRGV3P03979 118 aa13.16□□□□□ -0.3
LSS-205ENST00000457828 PEF1Q9UBV8 284 aaKnown RBP13.16□□□□□ -0.3
LSS-205ENST00000457828 A0A087X0K7 114 aa13.15□□□□□ -0.3
LSS-205ENST00000457828 IGLL1P15814 213 aa13.15□□□□□ -0.3
LSS-205ENST00000457828 C11orf44Q8N8P7 122 aa13.15□□□□□ -0.3
LSS-205ENST00000457828 Q8TCH9 128 aa13.15□□□□□ -0.3
LSS-205ENST00000457828 PLXNB1O43157 2135 aa13.15□□□□□ -0.3
LSS-205ENST00000457828 TMEM97Q5BJF2 176 aa13.15□□□□□ -0.3
LSS-205ENST00000457828 Q71RC1 249 aaPredicted RBP13.15□□□□□ -0.3
LSS-205ENST00000457828 A0A1B0GWJ7 208 aa13.15□□□□□ -0.3
LSS-205ENST00000457828 SRRM4A7MD48 611 aaKnown RBP13.15□□□□□ -0.3
LSS-205ENST00000457828 TMEM219Q86XT9 240 aa13.15□□□□□ -0.3
LSS-205ENST00000457828 LINC01356Q8N9X3 169 aa13.15□□□□□ -0.3
LSS-205ENST00000457828 MSMBP08118 114 aa13.14□□□□□ -0.31
LSS-205ENST00000457828 GPR183P32249 361 aa13.14□□□□□ -0.31
LSS-205ENST00000457828 TMEM249Q2WGJ8 235 aa13.14□□□□□ -0.31
LSS-205ENST00000457828 COX11Q9Y6N1 276 aa13.14□□□□□ -0.31
LSS-205ENST00000457828 POLQO75417 2590 aa13.14□□□□□ -0.31
LSS-205ENST00000457828 GATA4P43694 442 aa13.14□□□□□ -0.31
LSS-205ENST00000457828 LINC00527Q9UJ94 153 aa13.14□□□□□ -0.31
LSS-205ENST00000457828 NBR2O15453 112 aa13.14□□□□□ -0.31
LSS-205ENST00000457828 MFAP4P55083 255 aa13.14□□□□□ -0.31
LSS-205ENST00000457828 C17orf58Q2M2W7 97 aa13.14□□□□□ -0.31
LSS-205ENST00000457828 ZNF329Q86UD4 541 aa13.14□□□□□ -0.31
LSS-205ENST00000457828 S100A4P26447 101 aaKnown RBP13.13□□□□□ -0.31
LSS-205ENST00000457828 ORAOV1Q8WV07 137 aa13.13□□□□□ -0.31
LSS-205ENST00000457828 ST20Q9HBF5 79 aa13.13□□□□□ -0.31
LSS-205ENST00000457828 TNRC6AQ8NDV7 1962 aaKnown RBP13.13□□□□□ -0.31
LSS-205ENST00000457828 SYS1-DBNDD2H3BUS1 97 aa13.13□□□□□ -0.31
LSS-205ENST00000457828 J3QR89 54 aa13.13□□□□□ -0.31
LSS-205ENST00000457828 FXYD7P58549 80 aa13.13□□□□□ -0.31
LSS-205ENST00000457828 ATP5G2Q06055 141 aa13.13□□□□□ -0.31
LSS-205ENST00000457828 JMJD8Q96S16 334 aa13.13□□□□□ -0.31
LSS-205ENST00000457828 SETD2Q9BYW2 2564 aaPredicted RBP13.13□□□□□ -0.31
LSS-205ENST00000457828 CGB1A6NKQ9 187 aa13.13□□□□□ -0.31
LSS-205ENST00000457828 PPP1R27Q86WC6 154 aa13.13□□□□□ -0.31
LSS-205ENST00000457828 PRELID3AQ96N28 172 aa13.13□□□□□ -0.31
LSS-205ENST00000457828 ABCA12Q86UK0 2595 aa13.13□□□□□ -0.31
LSS-205ENST00000457828 KMT2EQ8IZD2 1858 aa13.13□□□□□ -0.31
LSS-205ENST00000457828 SLC25A48Q6ZT89 311 aaKnown RBP13.13□□□□□ -0.31
LSS-205ENST00000457828 ATP5L2Q7Z4Y8 100 aa13.13□□□□□ -0.31
LSS-205ENST00000457828 SOX21Q9Y651 276 aaPredicted RBP13.13□□□□□ -0.31
LSS-205ENST00000457828 H0YJW9 148 aa13.12□□□□□ -0.31
LSS-205ENST00000457828 H3BUX3 64 aa13.12□□□□□ -0.31
LSS-205ENST00000457828 PROP1O75360 226 aa13.12□□□□□ -0.31
LSS-205ENST00000457828 GAGE1Q13065 139 aa13.12□□□□□ -0.31
LSS-205ENST00000457828 TEX45Q8NA69 505 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms