RNA–Protein interactions for RNA: ENST00000455013.2

C1DP3-201, Transcript of C1D nuclear receptor corepressor pseudogene 3, humanhuman

BASIC

Gene C1DP3, Length 423 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1DP3-201ENST00000455013 S100GP29377 79 aa2.31□□□□□ -2.04
C1DP3-201ENST00000455013 BRS3P32247 399 aa2.31□□□□□ -2.04
C1DP3-201ENST00000455013 RAB4BP61018 213 aa2.31□□□□□ -2.04
C1DP3-201ENST00000455013 ZNF563Q8TA94 476 aa2.31□□□□□ -2.04
C1DP3-201ENST00000455013 SPANXA1Q9NS26 97 aa2.31□□□□□ -2.04
C1DP3-201ENST00000455013 GINS2Q9Y248 185 aa2.31□□□□□ -2.04
C1DP3-201ENST00000455013 RNF11Q9Y3C5 154 aa2.31□□□□□ -2.04
C1DP3-201ENST00000455013 HSPB11Q9Y547 144 aa2.31□□□□□ -2.04
C1DP3-201ENST00000455013 ASB4Q9Y574 426 aa2.31□□□□□ -2.04
C1DP3-201ENST00000455013 COL5A3P25940 1745 aaPredicted RBP2.31□□□□□ -2.04
C1DP3-201ENST00000455013 EML6Q6ZMW3 1958 aa2.3□□□□□ -2.04
C1DP3-201ENST00000455013 TRDV1A0A1B0GX56 115 aa2.3□□□□□ -2.04
C1DP3-201ENST00000455013 RNASE3P12724 160 aaKnown RBP2.3□□□□□ -2.04
C1DP3-201ENST00000455013 HBBP68871 147 aa2.3□□□□□ -2.04
C1DP3-201ENST00000455013 Q8N2B8 174 aa2.3□□□□□ -2.04
C1DP3-201ENST00000455013 OR2T35Q8NGX2 323 aa2.3□□□□□ -2.04
C1DP3-201ENST00000455013 C4orf3Q8WVX3 66 aa2.3□□□□□ -2.04
C1DP3-201ENST00000455013 BORCS8Q96FH0 119 aa2.3□□□□□ -2.04
C1DP3-201ENST00000455013 CEP164Q9UPV0 1460 aa2.3□□□□□ -2.04
C1DP3-201ENST00000455013 SCN8AQ9UQD0 1980 aa2.3□□□□□ -2.04
C1DP3-201ENST00000455013 MED12LQ86YW9 2145 aa2.29□□□□□ -2.04
C1DP3-201ENST00000455013 TECPR2O15040 1411 aa2.29□□□□□ -2.04
C1DP3-201ENST00000455013 C17orf112F2Z3M2 114 aa2.29□□□□□ -2.04
C1DP3-201ENST00000455013 RPS28P62857 69 aaKnown RBP2.29□□□□□ -2.04
C1DP3-201ENST00000455013 MSMO1Q15800 293 aa2.29□□□□□ -2.04
C1DP3-201ENST00000455013 DEFB113Q30KQ7 82 aa2.29□□□□□ -2.04
C1DP3-201ENST00000455013 SAMD13Q5VXD3 122 aa2.29□□□□□ -2.04
C1DP3-201ENST00000455013 OR5D16Q8NGK9 328 aa2.29□□□□□ -2.04
C1DP3-201ENST00000455013 ZNF714Q96N38 554 aa2.29□□□□□ -2.04
C1DP3-201ENST00000455013 NAT8BQ9UHF3 227 aa2.29□□□□□ -2.04
C1DP3-201ENST00000455013 MICAL3Q7RTP6 2002 aa2.29□□□□□ -2.04
C1DP3-201ENST00000455013 H7BYZ3 331 aa2.28□□□□□ -2.04
C1DP3-201ENST00000455013 RPL35P42766 123 aaKnown RBP2.28□□□□□ -2.04
C1DP3-201ENST00000455013 DSCR4P56555 118 aaPredicted RBP2.28□□□□□ -2.04
C1DP3-201ENST00000455013 EIF3IQ13347 325 aaKnown RBP2.28□□□□□ -2.04
C1DP3-201ENST00000455013 SURF2Q15527 256 aaPredicted RBP2.28□□□□□ -2.04
C1DP3-201ENST00000455013 C1orf137Q5JT78 98 aa2.28□□□□□ -2.04
C1DP3-201ENST00000455013 GRPEL2Q8TAA5 225 aa2.28□□□□□ -2.04
C1DP3-201ENST00000455013 TCEAL2Q9H3H9 227 aaPredicted RBP2.28□□□□□ -2.04
C1DP3-201ENST00000455013 COL4A5P29400 1685 aa2.28□□□□□ -2.05
C1DP3-201ENST00000455013 SDK1Q7Z5N4 2213 aa2.27□□□□□ -2.05
C1DP3-201ENST00000455013 ALPK2Q86TB3 2170 aa2.27□□□□□ -2.05
C1DP3-201ENST00000455013 CR1P17927 2039 aa2.27□□□□□ -2.05
C1DP3-201ENST00000455013 A0A087WSZ3 146 aa2.27□□□□□ -2.05
C1DP3-201ENST00000455013 ODAMA1E959 279 aa2.27□□□□□ -2.05
C1DP3-201ENST00000455013 E7EUB6 86 aa2.27□□□□□ -2.05
C1DP3-201ENST00000455013 POLR2HP52434 150 aaKnown RBP2.27□□□□□ -2.05
C1DP3-201ENST00000455013 UNQ6190/PRO20217Q6UXQ8 127 aa2.27□□□□□ -2.05
C1DP3-201ENST00000455013 PCDH15Q96QU1 1955 aa2.27□□□□□ -2.05
C1DP3-201ENST00000455013 BCL9O00512 1426 aa2.26□□□□□ -2.05
C1DP3-201ENST00000455013 ADGBQ8N7X0 1667 aa2.26□□□□□ -2.05
C1DP3-201ENST00000455013 RER1O15258 196 aa2.26□□□□□ -2.05
C1DP3-201ENST00000455013 S100A11P31949 105 aa2.26□□□□□ -2.05
C1DP3-201ENST00000455013 RAB5CP51148 216 aa2.26□□□□□ -2.05
C1DP3-201ENST00000455013 CNBPP62633 177 aaKnown RBP2.26□□□□□ -2.05
C1DP3-201ENST00000455013 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.26□□□□□ -2.05
C1DP3-201ENST00000455013 OR4K15Q8NH41 348 aa2.26□□□□□ -2.05
C1DP3-201ENST00000455013 OR4C6Q8NH72 309 aa2.26□□□□□ -2.05
C1DP3-201ENST00000455013 TMEM254Q8TBM7 123 aa2.26□□□□□ -2.05
C1DP3-201ENST00000455013 RETNLBQ9BQ08 111 aa2.26□□□□□ -2.05
C1DP3-201ENST00000455013 MED31Q9Y3C7 131 aa2.26□□□□□ -2.05
C1DP3-201ENST00000455013 CHCHD2Q9Y6H1 151 aaPredicted RBP2.26□□□□□ -2.05
C1DP3-201ENST00000455013 ANAPC1Q9H1A4 1944 aa2.26□□□□□ -2.05
C1DP3-201ENST00000455013 TAF1LQ8IZX4 1826 aa2.26□□□□□ -2.05
C1DP3-201ENST00000455013 TRAPPC8Q9Y2L5 1435 aa2.25□□□□□ -2.05
C1DP3-201ENST00000455013 TCRBV4S1A1TA0A5B7 111 aa2.25□□□□□ -2.05
C1DP3-201ENST00000455013 HYPMO75409 117 aa2.25□□□□□ -2.05
C1DP3-201ENST00000455013 KLRD1Q13241 179 aa2.25□□□□□ -2.05
C1DP3-201ENST00000455013 ALX1Q15699 326 aa2.25□□□□□ -2.05
C1DP3-201ENST00000455013 CHCHD1Q96BP2 118 aaKnown RBP2.25□□□□□ -2.05
C1DP3-201ENST00000455013 CCDC115Q96NT0 180 aa2.25□□□□□ -2.05
C1DP3-201ENST00000455013 SPANXCQ9NY87 97 aa2.25□□□□□ -2.05
C1DP3-201ENST00000455013 DIDO1Q9BTC0 2240 aaKnown RBP2.25□□□□□ -2.05
C1DP3-201ENST00000455013 TRPM1Q7Z4N2 1603 aa2.24□□□□□ -2.05
C1DP3-201ENST00000455013 RTL9Q8NET4 1388 aa2.24□□□□□ -2.05
C1DP3-201ENST00000455013 IGHV1-58A0A0C4DH39 117 aa2.24□□□□□ -2.05
C1DP3-201ENST00000455013 KPNA4O00629 521 aaPredicted RBP2.24□□□□□ -2.05
C1DP3-201ENST00000455013 IGLV1-51P01701 117 aa2.24□□□□□ -2.05
C1DP3-201ENST00000455013 KRTAP12-4P60329 112 aa2.24□□□□□ -2.05
C1DP3-201ENST00000455013 KRTAP21-3Q3LHN1 58 aa2.24□□□□□ -2.05
C1DP3-201ENST00000455013 MCEEQ96PE7 176 aa2.24□□□□□ -2.05
C1DP3-201ENST00000455013 REG4Q9BYZ8 158 aa2.24□□□□□ -2.05
C1DP3-201ENST00000455013 NUP98P52948 1817 aa2.24□□□□□ -2.05
C1DP3-201ENST00000455013 FBN1P35555 2871 aaKnown RBP2.24□□□□□ -2.05
C1DP3-201ENST00000455013 NISCHQ9Y2I1 1504 aa2.23□□□□□ -2.05
C1DP3-201ENST00000455013 GABARAPH6UMI1 98 aa2.23□□□□□ -2.05
C1DP3-201ENST00000455013 SCGB1A1P11684 91 aa2.23□□□□□ -2.05
C1DP3-201ENST00000455013 RPL7P18124 248 aaKnown RBP2.23□□□□□ -2.05
C1DP3-201ENST00000455013 NDUFA6P56556 154 aa2.23□□□□□ -2.05
C1DP3-201ENST00000455013 C4orf22Q6V702 233 aa2.23□□□□□ -2.05
C1DP3-201ENST00000455013 DEFB119Q8N690 84 aa2.23□□□□□ -2.05
C1DP3-201ENST00000455013 TMEM35BQ8NCS4 154 aa2.23□□□□□ -2.05
C1DP3-201ENST00000455013 HYLS1Q96M11 299 aa2.23□□□□□ -2.05
C1DP3-201ENST00000455013 TP53RKQ96S44 253 aa2.23□□□□□ -2.05
C1DP3-201ENST00000455013 RASL12Q9NYN1 266 aa2.23□□□□□ -2.05
C1DP3-201ENST00000455013 COL11A1P12107 1806 aaPredicted RBP2.22□□□□□ -2.05
C1DP3-201ENST00000455013 MYH10P35580 1976 aa2.22□□□□□ -2.05
C1DP3-201ENST00000455013 ARL5CA6NH57 179 aa2.22□□□□□ -2.05
C1DP3-201ENST00000455013 B4DSR2 109 aa2.22□□□□□ -2.05
C1DP3-201ENST00000455013 K7ERJ3 54 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms