RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 MOB4Q9Y3A3 225 aa10.72□□□□□ -0.69
CLK3-203ENST00000454830 HOXA5P20719 270 aa10.71□□□□□ -0.69
CLK3-203ENST00000454830 RPL15P61313 204 aaKnown RBP10.71□□□□□ -0.69
CLK3-203ENST00000454830 SHANK2-AS3Q9BTD1 123 aa10.71□□□□□ -0.69
CLK3-203ENST00000454830 NIT2Q9NQR4 276 aa10.71□□□□□ -0.69
CLK3-203ENST00000454830 S100A8P05109 93 aa10.71□□□□□ -0.69
CLK3-203ENST00000454830 EGR2P11161 476 aaPredicted RBP10.71□□□□□ -0.69
CLK3-203ENST00000454830 AJUBAQ96IF1 538 aa10.71□□□□□ -0.69
CLK3-203ENST00000454830 PLP1P60201 277 aa10.71□□□□□ -0.7
CLK3-203ENST00000454830 FOXL1Q12952 345 aa10.71□□□□□ -0.7
CLK3-203ENST00000454830 PYGO2Q9BRQ0 406 aa10.71□□□□□ -0.7
CLK3-203ENST00000454830 ATG101Q9BSB4 218 aa10.71□□□□□ -0.7
CLK3-203ENST00000454830 SNURFLB1AK76 121 aa10.7□□□□□ -0.7
CLK3-203ENST00000454830 CDX1P47902 265 aaPredicted RBP10.7□□□□□ -0.7
CLK3-203ENST00000454830 TCEAL7Q9BRU2 100 aa10.7□□□□□ -0.7
CLK3-203ENST00000454830 MRPL27Q9P0M9 148 aaKnown RBP10.7□□□□□ -0.7
CLK3-203ENST00000454830 LY96Q9Y6Y9 160 aa10.7□□□□□ -0.7
CLK3-203ENST00000454830 GOSR1O95249 250 aa10.7□□□□□ -0.7
CLK3-203ENST00000454830 FAM110DQ8TAY7 271 aaPredicted RBP10.7□□□□□ -0.7
CLK3-203ENST00000454830 NAT8BQ9UHF3 227 aa10.7□□□□□ -0.7
CLK3-203ENST00000454830 RABAC1Q9UI14 185 aa10.7□□□□□ -0.7
CLK3-203ENST00000454830 V9GYV3 84 aa10.7□□□□□ -0.7
CLK3-203ENST00000454830 M0R3E3 92 aa10.7□□□□□ -0.7
CLK3-203ENST00000454830 TCRAP04437 139 aa10.7□□□□□ -0.7
CLK3-203ENST00000454830 AAMDCQ9H7C9 122 aa10.7□□□□□ -0.7
CLK3-203ENST00000454830 CELSR2Q9HCU4 2923 aa10.69□□□□□ -0.7
CLK3-203ENST00000454830 RNF223E7ERA6 249 aa10.69□□□□□ -0.7
CLK3-203ENST00000454830 SSTP61278 116 aa10.69□□□□□ -0.7
CLK3-203ENST00000454830 C5orf56Q8N8D9 126 aa10.69□□□□□ -0.7
CLK3-203ENST00000454830 H3BRN7 92 aa10.69□□□□□ -0.7
CLK3-203ENST00000454830 GCGP01275 180 aa10.69□□□□□ -0.7
CLK3-203ENST00000454830 TRGV3P03979 118 aa10.69□□□□□ -0.7
CLK3-203ENST00000454830 FRMD6-AS1P0C7T7 363 aa10.69□□□□□ -0.7
CLK3-203ENST00000454830 YPEL3P61236 119 aaPredicted RBP10.69□□□□□ -0.7
CLK3-203ENST00000454830 IGFL4Q6B9Z1 124 aa10.69□□□□□ -0.7
CLK3-203ENST00000454830 OSTCQ9NRP0 149 aa10.69□□□□□ -0.7
CLK3-203ENST00000454830 PITPNC1Q9UKF7 332 aa10.69□□□□□ -0.7
CLK3-203ENST00000454830 TRAV41A0A0B4J266 112 aa10.69□□□□□ -0.7
CLK3-203ENST00000454830 GRIFINA4D1Z8 144 aa10.69□□□□□ -0.7
CLK3-203ENST00000454830 ZNF785A8K8V0 405 aa10.69□□□□□ -0.7
CLK3-203ENST00000454830 IGF2BP2-AS1Q96M15 143 aa10.69□□□□□ -0.7
CLK3-203ENST00000454830 NOL4LQ96MY1 436 aaPredicted RBP10.69□□□□□ -0.7
CLK3-203ENST00000454830 GPR82Q96P67 336 aa10.69□□□□□ -0.7
CLK3-203ENST00000454830 OTORQ9NRC9 128 aa10.69□□□□□ -0.7
CLK3-203ENST00000454830 K7EQM0 130 aa10.68□□□□□ -0.7
CLK3-203ENST00000454830 CTSGP08311 255 aa10.68□□□□□ -0.7
CLK3-203ENST00000454830 KIAA1644Q3SXP7 199 aa10.68□□□□□ -0.7
CLK3-203ENST00000454830 PRR31Q5SQ13 230 aa10.68□□□□□ -0.7
CLK3-203ENST00000454830 VWC2LB2RUY7 222 aa10.68□□□□□ -0.7
CLK3-203ENST00000454830 BMPR1BO00238 502 aa10.68□□□□□ -0.7
CLK3-203ENST00000454830 IGLV2-8P01709 118 aa10.68□□□□□ -0.7
CLK3-203ENST00000454830 IGHV3-11P01762 117 aa10.68□□□□□ -0.7
CLK3-203ENST00000454830 PF4V1P10720 104 aa10.68□□□□□ -0.7
CLK3-203ENST00000454830 KRTAP10-9P60411 292 aa10.68□□□□□ -0.7
CLK3-203ENST00000454830 ZNF331Q9NQX6 463 aaPredicted RBP10.68□□□□□ -0.7
CLK3-203ENST00000454830 CSN1S1P47710 185 aa10.68□□□□□ -0.7
CLK3-203ENST00000454830 CAMPP49913 170 aa10.68□□□□□ -0.7
CLK3-203ENST00000454830 TPPP2P59282 170 aa10.68□□□□□ -0.7
CLK3-203ENST00000454830 ATP5G2Q06055 141 aa10.68□□□□□ -0.7
CLK3-203ENST00000454830 TMEM183BQ1AE95 376 aa10.68□□□□□ -0.7
CLK3-203ENST00000454830 NUDT10Q8NFP7 164 aa10.68□□□□□ -0.7
CLK3-203ENST00000454830 NUDT11Q96G61 164 aa10.68□□□□□ -0.7
CLK3-203ENST00000454830 MRPL18Q9H0U6 180 aaKnown RBP10.68□□□□□ -0.7
CLK3-203ENST00000454830 AVPP01185 164 aa10.67□□□□□ -0.7
CLK3-203ENST00000454830 ACTL10Q5JWF8 245 aa10.67□□□□□ -0.7
CLK3-203ENST00000454830 EEF1AKMT3Q96AZ1 226 aa10.67□□□□□ -0.7
CLK3-203ENST00000454830 PRRC2AP48634 2157 aaKnown RBP10.67□□□□□ -0.7
CLK3-203ENST00000454830 ADMP35318 185 aa10.67□□□□□ -0.7
CLK3-203ENST00000454830 DSCR9P59020 149 aa10.67□□□□□ -0.7
CLK3-203ENST00000454830 CIARTQ8N365 385 aaPredicted RBP10.67□□□□□ -0.7
CLK3-203ENST00000454830 RNF24Q9Y225 148 aa10.67□□□□□ -0.7
CLK3-203ENST00000454830 CHD6Q8TD26 2715 aa10.67□□□□□ -0.7
CLK3-203ENST00000454830 MYO9AB2RTY4 2548 aa10.67□□□□□ -0.7
CLK3-203ENST00000454830 ZANQ9Y493 2812 aa10.67□□□□□ -0.7
CLK3-203ENST00000454830 TRBV19A0A075B6N1 114 aa10.67□□□□□ -0.7
CLK3-203ENST00000454830 A0A1B0GUS0 222 aa10.67□□□□□ -0.7
CLK3-203ENST00000454830 P01737 135 aa10.67□□□□□ -0.7
CLK3-203ENST00000454830 SRSF1Q07955 248 aaKnown RBP eCLIP10.67□□□□□ -0.7
CLK3-203ENST00000454830 TPPP3Q9BW30 176 aa10.67□□□□□ -0.7
CLK3-203ENST00000454830 NOTCH2Q04721 2471 aa10.66□□□□□ -0.7
CLK3-203ENST00000454830 F8W735 103 aaPredicted RBP10.66□□□□□ -0.7
CLK3-203ENST00000454830 SLC25A16P16260 332 aa10.66□□□□□ -0.7
CLK3-203ENST00000454830 RPL7P18124 248 aaKnown RBP10.66□□□□□ -0.7
CLK3-203ENST00000454830 BLCAPP62952 87 aa10.66□□□□□ -0.7
CLK3-203ENST00000454830 LCNL1Q6ZST4 164 aa10.66□□□□□ -0.7
CLK3-203ENST00000454830 TOMM20LQ6UXN7 152 aa10.66□□□□□ -0.7
CLK3-203ENST00000454830 HIST3H2BBQ8N257 126 aa10.66□□□□□ -0.7
CLK3-203ENST00000454830 FMC1Q96HJ9 113 aa10.66□□□□□ -0.7
CLK3-203ENST00000454830 WI2-2373I1.2A0A1W2PRP0 233 aa10.66□□□□□ -0.7
CLK3-203ENST00000454830 TYMSP04818 313 aa10.66□□□□□ -0.7
CLK3-203ENST00000454830 BAGE3Q86Y29 109 aa10.66□□□□□ -0.7
CLK3-203ENST00000454830 TMEM14CQ9P0S9 112 aa10.66□□□□□ -0.7
CLK3-203ENST00000454830 POLR3KQ9Y2Y1 108 aaPredicted RBP10.66□□□□□ -0.7
CLK3-203ENST00000454830 PACRGQ96M98 296 aaPredicted RBP10.65□□□□□ -0.7
CLK3-203ENST00000454830 LINC01356Q8N9X3 169 aa10.65□□□□□ -0.7
CLK3-203ENST00000454830 SMIM6P0DI80 62 aa10.65□□□□□ -0.71
CLK3-203ENST00000454830 MYCNOSP40205 109 aa10.65□□□□□ -0.71
CLK3-203ENST00000454830 TCF24Q7RTU0 167 aa10.65□□□□□ -0.71
CLK3-203ENST00000454830 ZNF502Q8TBZ5 544 aa10.65□□□□□ -0.71
CLK3-203ENST00000454830 VN1R17PQ8TDU5 208 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms