RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 ZNF502Q8TBZ5 544 aa13.61□□□□□ -0.23
SMC6-206ENST00000446852 TCRAP04437 139 aa13.61□□□□□ -0.23
SMC6-206ENST00000446852 RPEL1Q2QD12 228 aa13.61□□□□□ -0.23
SMC6-206ENST00000446852 TXN2Q99757 166 aa13.61□□□□□ -0.23
SMC6-206ENST00000446852 TRBV19A0A075B6N1 114 aa13.6□□□□□ -0.23
SMC6-206ENST00000446852 UBE2G1P62253 170 aa13.6□□□□□ -0.23
SMC6-206ENST00000446852 BTF3L4Q96K17 158 aa13.6□□□□□ -0.23
SMC6-206ENST00000446852 OTORQ9NRC9 128 aa13.6□□□□□ -0.23
SMC6-206ENST00000446852 GPR183P32249 361 aa13.59□□□□□ -0.23
SMC6-206ENST00000446852 CDX1P47902 265 aaPredicted RBP13.59□□□□□ -0.23
SMC6-206ENST00000446852 LY6EQ16553 131 aa13.59□□□□□ -0.23
SMC6-206ENST00000446852 H3BUX3 64 aa13.59□□□□□ -0.23
SMC6-206ENST00000446852 OR4F17Q8NGA8 305 aa13.59□□□□□ -0.23
SMC6-206ENST00000446852 C12orf57Q99622 126 aa13.59□□□□□ -0.23
SMC6-206ENST00000446852 IGHV3-35A0A0C4DH35 117 aa13.58□□□□□ -0.23
SMC6-206ENST00000446852 C19orf54Q5BKX5 351 aa13.58□□□□□ -0.23
SMC6-206ENST00000446852 OR8I2Q8N0Y5 310 aa13.58□□□□□ -0.23
SMC6-206ENST00000446852 CCDC140Q96MF4 163 aa13.58□□□□□ -0.23
SMC6-206ENST00000446852 MS4A10Q96PG2 267 aa13.58□□□□□ -0.23
SMC6-206ENST00000446852 LINC00527Q9UJ94 153 aa13.58□□□□□ -0.23
SMC6-206ENST00000446852 NBPF19A0A087WUL8 3843 aa13.58□□□□□ -0.24
SMC6-206ENST00000446852 APCP25054 2843 aa13.58□□□□□ -0.24
SMC6-206ENST00000446852 TRAV9-1A0A075B6T8 112 aa13.58□□□□□ -0.24
SMC6-206ENST00000446852 TRAV20A0A0B4J274 112 aa13.58□□□□□ -0.24
SMC6-206ENST00000446852 S100A8P05109 93 aa13.58□□□□□ -0.24
SMC6-206ENST00000446852 MEOX2P50222 304 aa13.58□□□□□ -0.24
SMC6-206ENST00000446852 CR1P17927 2039 aa13.58□□□□□ -0.24
SMC6-206ENST00000446852 NAV2Q8IVL1 2488 aa13.58□□□□□ -0.24
SMC6-206ENST00000446852 CA1P00915 261 aaPredicted RBP13.57□□□□□ -0.24
SMC6-206ENST00000446852 FRMD6-AS1P0C7T7 363 aa13.57□□□□□ -0.24
SMC6-206ENST00000446852 SIGLEC15Q6ZMC9 328 aa13.57□□□□□ -0.24
SMC6-206ENST00000446852 HIST3H2BBQ8N257 126 aa13.57□□□□□ -0.24
SMC6-206ENST00000446852 FMC1Q96HJ9 113 aa13.57□□□□□ -0.24
SMC6-206ENST00000446852 IGHV3OR16-8A0A075B7F1 116 aa13.57□□□□□ -0.24
SMC6-206ENST00000446852 PDZD11Q5EBL8 140 aa13.57□□□□□ -0.24
SMC6-206ENST00000446852 MAPK1IP1LQ8NDC0 245 aa13.57□□□□□ -0.24
SMC6-206ENST00000446852 MLST8Q9BVC4 326 aa13.57□□□□□ -0.24
SMC6-206ENST00000446852 SERTAD4Q9NUC0 356 aa13.57□□□□□ -0.24
SMC6-206ENST00000446852 TRAPPC1Q9Y5R8 145 aa13.57□□□□□ -0.24
SMC6-206ENST00000446852 TRAV8-1A0A0A6YYK1 113 aa13.56□□□□□ -0.24
SMC6-206ENST00000446852 TRAV41A0A0B4J266 112 aa13.56□□□□□ -0.24
SMC6-206ENST00000446852 A6NDX4 124 aa13.56□□□□□ -0.24
SMC6-206ENST00000446852 SCGB2A1O75556 95 aa13.56□□□□□ -0.24
SMC6-206ENST00000446852 CLEC3BP05452 202 aa13.56□□□□□ -0.24
SMC6-206ENST00000446852 TCL1AP56279 114 aa13.56□□□□□ -0.24
SMC6-206ENST00000446852 PRR27Q6MZM9 219 aa13.56□□□□□ -0.24
SMC6-206ENST00000446852 FAM231DQ6ZW35 169 aa13.56□□□□□ -0.24
SMC6-206ENST00000446852 GPR82Q96P67 336 aa13.56□□□□□ -0.24
SMC6-206ENST00000446852 GPR61Q9BZJ8 451 aa13.56□□□□□ -0.24
SMC6-206ENST00000446852 ZNF705GA8MUZ8 300 aaPredicted RBP13.56□□□□□ -0.24
SMC6-206ENST00000446852 LTAP01374 205 aa13.56□□□□□ -0.24
SMC6-206ENST00000446852 GATA3P23771 443 aa13.56□□□□□ -0.24
SMC6-206ENST00000446852 CRIP2P52943 208 aaPredicted RBP13.56□□□□□ -0.24
SMC6-206ENST00000446852 C9orf152Q5JTZ5 239 aa13.56□□□□□ -0.24
SMC6-206ENST00000446852 LINC01356Q8N9X3 169 aa13.56□□□□□ -0.24
SMC6-206ENST00000446852 RNF24Q9Y225 148 aa13.56□□□□□ -0.24
SMC6-206ENST00000446852 GOLT1AQ6ZVE7 132 aa13.55□□□□□ -0.24
SMC6-206ENST00000446852 S100A7AQ86SG5 101 aa13.55□□□□□ -0.24
SMC6-206ENST00000446852 NUDT10Q8NFP7 164 aa13.55□□□□□ -0.24
SMC6-206ENST00000446852 CMTM2Q8TAZ6 248 aa13.55□□□□□ -0.24
SMC6-206ENST00000446852 NUDT11Q96G61 164 aa13.55□□□□□ -0.24
SMC6-206ENST00000446852 PITPNC1Q9UKF7 332 aa13.55□□□□□ -0.24
SMC6-206ENST00000446852 SMIM27A0A1W2PRY6 76 aa13.55□□□□□ -0.24
SMC6-206ENST00000446852 IGLV2-11P01706 119 aa13.55□□□□□ -0.24
SMC6-206ENST00000446852 PRB4P10163 310 aaPredicted RBP13.55□□□□□ -0.24
SMC6-206ENST00000446852 CBLN1P23435 193 aa13.55□□□□□ -0.24
SMC6-206ENST00000446852 CLEC19AQ6UXS0 136 aa13.55□□□□□ -0.24
SMC6-206ENST00000446852 Q71RC1 249 aaPredicted RBP13.55□□□□□ -0.24
SMC6-206ENST00000446852 MBD6Q96DN6 1003 aa13.55□□□□□ -0.24
SMC6-206ENST00000446852 SMIM12Q96EX1 92 aa13.55□□□□□ -0.24
SMC6-206ENST00000446852 ZFAND3Q9H8U3 227 aa13.55□□□□□ -0.24
SMC6-206ENST00000446852 S100A9P06702 114 aaKnown RBP13.54□□□□□ -0.24
SMC6-206ENST00000446852 TOMM20LQ6UXN7 152 aa13.54□□□□□ -0.24
SMC6-206ENST00000446852 Q86TA4 180 aa13.54□□□□□ -0.24
SMC6-206ENST00000446852 RABAC1Q9UI14 185 aa13.54□□□□□ -0.24
SMC6-206ENST00000446852 KMT2BQ9UMN6 2715 aaPredicted RBP13.54□□□□□ -0.24
SMC6-206ENST00000446852 XKRY2A2RUG3 117 aa13.54□□□□□ -0.24
SMC6-206ENST00000446852 SPINK4O60575 86 aa13.54□□□□□ -0.24
SMC6-206ENST00000446852 SLC35B1P78383 322 aa13.54□□□□□ -0.24
SMC6-206ENST00000446852 LINC00322Q6ZN03 302 aaPredicted RBP13.54□□□□□ -0.24
SMC6-206ENST00000446852 LYPD1Q8N2G4 141 aa13.54□□□□□ -0.24
SMC6-206ENST00000446852 SMIM6P0DI80 62 aa13.53□□□□□ -0.24
SMC6-206ENST00000446852 EEF1AKMT3Q96AZ1 226 aa13.53□□□□□ -0.24
SMC6-206ENST00000446852 MXRA5Q9NR99 2828 aa13.53□□□□□ -0.24
SMC6-206ENST00000446852 GATCO43716 136 aaKnown RBP13.53□□□□□ -0.24
SMC6-206ENST00000446852 IGF1P05019 195 aa13.53□□□□□ -0.24
SMC6-206ENST00000446852 GNB4Q9HAV0 340 aa13.53□□□□□ -0.24
SMC6-206ENST00000446852 GAR1Q9NY12 217 aaKnown RBP13.53□□□□□ -0.24
SMC6-206ENST00000446852 RNF223E7ERA6 249 aa13.52□□□□□ -0.24
SMC6-206ENST00000446852 M0R3E3 92 aa13.52□□□□□ -0.24
SMC6-206ENST00000446852 BMPR1BO00238 502 aa13.52□□□□□ -0.24
SMC6-206ENST00000446852 IER3P46695 156 aa13.52□□□□□ -0.24
SMC6-206ENST00000446852 BLCAPP62952 87 aa13.52□□□□□ -0.24
SMC6-206ENST00000446852 PDE6HQ13956 83 aa13.52□□□□□ -0.24
SMC6-206ENST00000446852 COA6Q5JTJ3 125 aaKnown RBP13.52□□□□□ -0.24
SMC6-206ENST00000446852 Q6ZS46 218 aa13.52□□□□□ -0.24
SMC6-206ENST00000446852 TMEM183AQ8IXX5 376 aa13.52□□□□□ -0.24
SMC6-206ENST00000446852 TRBV7-1A0A0A6YYK4 115 aa13.52□□□□□ -0.25
SMC6-206ENST00000446852 IGHG2P01859 326 aa13.52□□□□□ -0.25
SMC6-206ENST00000446852 NOL4LQ96MY1 436 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms