RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 GALR1P47211 349 aa11.73□□□□□ -0.53
CPSF7-205ENST00000439958 TCL1AP56279 114 aa11.73□□□□□ -0.53
CPSF7-205ENST00000439958 TOMM20LQ6UXN7 152 aa11.73□□□□□ -0.53
CPSF7-205ENST00000439958 SIGLECL1Q8N7X8 197 aa11.73□□□□□ -0.53
CPSF7-205ENST00000439958 C11orf44Q8N8P7 122 aa11.73□□□□□ -0.53
CPSF7-205ENST00000439958 FN1P02751 2386 aaKnown RBP11.72□□□□□ -0.53
CPSF7-205ENST00000439958 CUBNO60494 3623 aa11.72□□□□□ -0.53
CPSF7-205ENST00000439958 M0R3E3 92 aa11.72□□□□□ -0.53
CPSF7-205ENST00000439958 ARL3P36405 182 aa11.72□□□□□ -0.53
CPSF7-205ENST00000439958 IER3P46695 156 aa11.72□□□□□ -0.53
CPSF7-205ENST00000439958 CCDC140Q96MF4 163 aa11.72□□□□□ -0.53
CPSF7-205ENST00000439958 A0A1W2PRE2 83 aa11.72□□□□□ -0.53
CPSF7-205ENST00000439958 COLCA2A8K830 154 aa11.72□□□□□ -0.53
CPSF7-205ENST00000439958 TSPAN9O75954 239 aa11.72□□□□□ -0.53
CPSF7-205ENST00000439958 SLC35B1P78383 322 aa11.72□□□□□ -0.53
CPSF7-205ENST00000439958 GOLT1AQ6ZVE7 132 aa11.72□□□□□ -0.53
CPSF7-205ENST00000439958 ZNF502Q8TBZ5 544 aa11.72□□□□□ -0.53
CPSF7-205ENST00000439958 ZNF48Q96MX3 618 aaPredicted RBP11.72□□□□□ -0.53
CPSF7-205ENST00000439958 SMR3AQ99954 134 aa11.72□□□□□ -0.53
CPSF7-205ENST00000439958 RNASE7Q9H1E1 156 aaKnown RBP11.72□□□□□ -0.53
CPSF7-205ENST00000439958 ZNF586Q9NXT0 402 aa11.72□□□□□ -0.53
CPSF7-205ENST00000439958 PEX7O00628 323 aa11.71□□□□□ -0.53
CPSF7-205ENST00000439958 ISLRO14498 428 aa11.71□□□□□ -0.53
CPSF7-205ENST00000439958 RAB5AP20339 215 aa11.71□□□□□ -0.53
CPSF7-205ENST00000439958 SSTP61278 116 aa11.71□□□□□ -0.53
CPSF7-205ENST00000439958 BAGE2Q86Y30 109 aa11.71□□□□□ -0.53
CPSF7-205ENST00000439958 KRTAP1-3Q8IUG1 177 aa11.71□□□□□ -0.53
CPSF7-205ENST00000439958 C15orf54Q8N8G6 183 aa11.71□□□□□ -0.53
CPSF7-205ENST00000439958 SHANK2-AS3Q9BTD1 123 aa11.71□□□□□ -0.53
CPSF7-205ENST00000439958 SAV1Q9H4B6 383 aaPredicted RBP11.71□□□□□ -0.53
CPSF7-205ENST00000439958 S100A6P06703 90 aa11.71□□□□□ -0.54
CPSF7-205ENST00000439958 CXCL1P09341 107 aa11.71□□□□□ -0.54
CPSF7-205ENST00000439958 TXNDC17Q9BRA2 123 aa11.71□□□□□ -0.54
CPSF7-205ENST00000439958 C1orf196B1AJZ1 125 aa11.7□□□□□ -0.54
CPSF7-205ENST00000439958 TGOLN2O43493 480 aa11.7□□□□□ -0.54
CPSF7-205ENST00000439958 IGHG2P01859 326 aa11.7□□□□□ -0.54
CPSF7-205ENST00000439958 AKR1D1P51857 326 aa11.7□□□□□ -0.54
CPSF7-205ENST00000439958 PMS2P11Q13670 270 aa11.7□□□□□ -0.54
CPSF7-205ENST00000439958 PDZD2O15018 2839 aa11.7□□□□□ -0.54
CPSF7-205ENST00000439958 GP9P14770 177 aa11.7□□□□□ -0.54
CPSF7-205ENST00000439958 YPEL3P61236 119 aaPredicted RBP11.7□□□□□ -0.54
CPSF7-205ENST00000439958 VPREB3Q9UKI3 123 aa11.7□□□□□ -0.54
CPSF7-205ENST00000439958 B4DEV8 164 aa11.7□□□□□ -0.54
CPSF7-205ENST00000439958 OR4X2Q8NGF9 303 aa11.7□□□□□ -0.54
CPSF7-205ENST00000439958 MRPL27Q9P0M9 148 aaKnown RBP11.7□□□□□ -0.54
CPSF7-205ENST00000439958 HIST1H1EP10412 219 aaKnown RBP11.69□□□□□ -0.54
CPSF7-205ENST00000439958 S100A7AQ86SG5 101 aa11.69□□□□□ -0.54
CPSF7-205ENST00000439958 PRNTQ86SH4 94 aa11.69□□□□□ -0.54
CPSF7-205ENST00000439958 VN1R17PQ8TDU5 208 aa11.69□□□□□ -0.54
CPSF7-205ENST00000439958 SFRP2Q96HF1 295 aa11.69□□□□□ -0.54
CPSF7-205ENST00000439958 TMEM68Q96MH6 324 aa11.69□□□□□ -0.54
CPSF7-205ENST00000439958 CA1P00915 261 aaPredicted RBP11.69□□□□□ -0.54
CPSF7-205ENST00000439958 ELOBQ15370 118 aa11.69□□□□□ -0.54
CPSF7-205ENST00000439958 OR10G8Q8NGN5 311 aa11.69□□□□□ -0.54
CPSF7-205ENST00000439958 AAMDCQ9H7C9 122 aa11.69□□□□□ -0.54
CPSF7-205ENST00000439958 FAM210BQ96KR6 192 aa11.69□□□□□ -0.54
CPSF7-205ENST00000439958 FLI1Q01543 452 aaPredicted RBP11.68□□□□□ -0.54
CPSF7-205ENST00000439958 FRZBQ92765 325 aa11.68□□□□□ -0.54
CPSF7-205ENST00000439958 METTL26Q96S19 204 aa11.68□□□□□ -0.54
CPSF7-205ENST00000439958 NPFFR1Q9GZQ6 430 aa11.68□□□□□ -0.54
CPSF7-205ENST00000439958 EPDR1Q9UM22 224 aa11.68□□□□□ -0.54
CPSF7-205ENST00000439958 H3BRN7 92 aa11.68□□□□□ -0.54
CPSF7-205ENST00000439958 APOHP02749 345 aaPredicted RBP11.68□□□□□ -0.54
CPSF7-205ENST00000439958 PRSS57Q6UWY2 283 aa11.68□□□□□ -0.54
CPSF7-205ENST00000439958 OR5R1Q8NH85 324 aa11.68□□□□□ -0.54
CPSF7-205ENST00000439958 PRSS22Q9GZN4 317 aa11.68□□□□□ -0.54
CPSF7-205ENST00000439958 K7EN84 100 aa11.68□□□□□ -0.54
CPSF7-205ENST00000439958 RAB5BP61020 215 aa11.68□□□□□ -0.54
CPSF7-205ENST00000439958 C1QL4Q86Z23 238 aa11.68□□□□□ -0.54
CPSF7-205ENST00000439958 PRELID1Q9Y255 219 aa11.68□□□□□ -0.54
CPSF7-205ENST00000439958 TRBV7-1A0A0A6YYK4 115 aa11.67□□□□□ -0.54
CPSF7-205ENST00000439958 SRD5A1P18405 259 aa11.67□□□□□ -0.54
CPSF7-205ENST00000439958 RAB9AP51151 201 aa11.67□□□□□ -0.54
CPSF7-205ENST00000439958 HLA-DMBP28068 263 aa11.67□□□□□ -0.54
CPSF7-205ENST00000439958 PLP1P60201 277 aa11.67□□□□□ -0.54
CPSF7-205ENST00000439958 GAR1Q9NY12 217 aaKnown RBP11.67□□□□□ -0.54
CPSF7-205ENST00000439958 TRBV9A0A0B4J1U6 114 aa11.66□□□□□ -0.54
CPSF7-205ENST00000439958 ZNF705GA8MUZ8 300 aaPredicted RBP11.66□□□□□ -0.54
CPSF7-205ENST00000439958 HAX1O00165 279 aa11.66□□□□□ -0.54
CPSF7-205ENST00000439958 RPL7P18124 248 aaKnown RBP11.66□□□□□ -0.54
CPSF7-205ENST00000439958 RELQ04864 619 aaPredicted RBP11.66□□□□□ -0.54
CPSF7-205ENST00000439958 C5orf17Q8NAS9 161 aa11.66□□□□□ -0.54
CPSF7-205ENST00000439958 MBD6Q96DN6 1003 aa11.66□□□□□ -0.54
CPSF7-205ENST00000439958 FAM181BA6NEQ2 426 aa11.66□□□□□ -0.54
CPSF7-205ENST00000439958 RAB4BP61018 213 aa11.66□□□□□ -0.54
CPSF7-205ENST00000439958 PRR31Q5SQ13 230 aa11.66□□□□□ -0.54
CPSF7-205ENST00000439958 UNQ9165/PRO28630Q6UXU0 137 aa11.66□□□□□ -0.54
CPSF7-205ENST00000439958 A0A087WWC5 75 aa11.66□□□□□ -0.54
CPSF7-205ENST00000439958 WI2-2373I1.2A0A1W2PRP0 233 aa11.66□□□□□ -0.54
CPSF7-205ENST00000439958 RPLP1P05386 114 aaKnown RBP11.66□□□□□ -0.54
CPSF7-205ENST00000439958 TEX38Q6PEX7 206 aa11.66□□□□□ -0.54
CPSF7-205ENST00000439958 KCNIP4Q6PIL6 250 aa11.66□□□□□ -0.54
CPSF7-205ENST00000439958 TRGC2P03986 189 aa11.65□□□□□ -0.54
CPSF7-205ENST00000439958 IGF1P05019 195 aa11.65□□□□□ -0.54
CPSF7-205ENST00000439958 RNF182Q8N6D2 247 aa11.65□□□□□ -0.54
CPSF7-205ENST00000439958 TEP1Q99973 2627 aaKnown RBP11.65□□□□□ -0.54
CPSF7-205ENST00000439958 ZNF705FA8MVS1 300 aaPredicted RBP11.65□□□□□ -0.54
CPSF7-205ENST00000439958 GGCTO75223 188 aaKnown RBP11.65□□□□□ -0.54
CPSF7-205ENST00000439958 CSN1S1P47710 185 aa11.65□□□□□ -0.54
CPSF7-205ENST00000439958 Q6YL49 198 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms