RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 C3orf56Q8N813 242 aa5.24□□□□□ -1.57
BDNF-211ENST00000439476 FBXL7Q9UJT9 491 aa5.24□□□□□ -1.57
BDNF-211ENST00000439476 A0A1B0GWB2 263 aa5.24□□□□□ -1.57
BDNF-211ENST00000439476 DPM2O94777 84 aa5.24□□□□□ -1.57
BDNF-211ENST00000439476 WNT2P09544 360 aa5.24□□□□□ -1.57
BDNF-211ENST00000439476 SP9P0CG40 484 aa5.24□□□□□ -1.57
BDNF-211ENST00000439476 APELAP0DMC3 54 aa5.24□□□□□ -1.57
BDNF-211ENST00000439476 LEPP41159 167 aa5.24□□□□□ -1.57
BDNF-211ENST00000439476 OR5AN1Q8NGI8 311 aa5.24□□□□□ -1.57
BDNF-211ENST00000439476 OR2K2Q8NGT1 345 aa5.24□□□□□ -1.57
BDNF-211ENST00000439476 RCHY1Q96PM5 261 aa5.24□□□□□ -1.57
BDNF-211ENST00000439476 PI4KAP42356 2102 aa5.24□□□□□ -1.57
BDNF-211ENST00000439476 FAM231BA6NCW3 169 aa5.24□□□□□ -1.57
BDNF-211ENST00000439476 NBR2O15453 112 aa5.24□□□□□ -1.57
BDNF-211ENST00000439476 IGLV3-1P01715 115 aa5.24□□□□□ -1.57
BDNF-211ENST00000439476 FOXA3P55318 350 aaPredicted RBP5.24□□□□□ -1.57
BDNF-211ENST00000439476 TMEM170BQ5T4T1 132 aa5.24□□□□□ -1.57
BDNF-211ENST00000439476 PPP1R27Q86WC6 154 aa5.24□□□□□ -1.57
BDNF-211ENST00000439476 LYPD1Q8N2G4 141 aa5.24□□□□□ -1.57
BDNF-211ENST00000439476 ZNRF1Q8ND25 227 aa5.24□□□□□ -1.57
BDNF-211ENST00000439476 MRPL27Q9P0M9 148 aaKnown RBP5.24□□□□□ -1.57
BDNF-211ENST00000439476 FOXA2Q9Y261 457 aaPredicted RBP5.24□□□□□ -1.57
BDNF-211ENST00000439476 ZNF407Q9C0G0 2248 aa5.24□□□□□ -1.57
BDNF-211ENST00000439476 BPTFQ12830 3046 aa5.24□□□□□ -1.57
BDNF-211ENST00000439476 TRAV21A0A0B4J279 112 aa5.24□□□□□ -1.57
BDNF-211ENST00000439476 RBMY1BA6NDE4 496 aaKnown RBP5.24□□□□□ -1.57
BDNF-211ENST00000439476 RBMY1EA6NEQ0 496 aaKnown RBP5.24□□□□□ -1.57
BDNF-211ENST00000439476 TRGV3P03979 118 aa5.24□□□□□ -1.57
BDNF-211ENST00000439476 RBMY1DP0C7P1 496 aaKnown RBP5.24□□□□□ -1.57
BDNF-211ENST00000439476 RBMY1A1P0DJD3 496 aaKnown RBP5.24□□□□□ -1.57
BDNF-211ENST00000439476 RBMY1CP0DJD4 496 aa5.24□□□□□ -1.57
BDNF-211ENST00000439476 DUTP33316 252 aaKnown RBP5.24□□□□□ -1.57
BDNF-211ENST00000439476 SUMO2P61956 95 aaKnown RBP5.24□□□□□ -1.57
BDNF-211ENST00000439476 Q6ZWC4 215 aa5.24□□□□□ -1.57
BDNF-211ENST00000439476 KIAA1549LQ6ZVL6 1849 aa5.23□□□□□ -1.57
BDNF-211ENST00000439476 NCOA6Q14686 2063 aaPredicted RBP5.23□□□□□ -1.57
BDNF-211ENST00000439476 OVOL1O14753 267 aa5.23□□□□□ -1.57
BDNF-211ENST00000439476 OR9G9P0C7N8 305 aa5.23□□□□□ -1.57
BDNF-211ENST00000439476 GATA2P23769 480 aaPredicted RBP5.23□□□□□ -1.57
BDNF-211ENST00000439476 LHX2P50458 406 aa5.23□□□□□ -1.57
BDNF-211ENST00000439476 TREML4Q6UXN2 200 aa5.23□□□□□ -1.57
BDNF-211ENST00000439476 SSC4DQ8WTU2 575 aa5.23□□□□□ -1.57
BDNF-211ENST00000439476 SPANXDQ9BXN6 97 aa5.23□□□□□ -1.57
BDNF-211ENST00000439476 IGHV3-48P01763 117 aa5.23□□□□□ -1.57
BDNF-211ENST00000439476 TFF1P04155 84 aa5.23□□□□□ -1.57
BDNF-211ENST00000439476 CELA3BP08861 270 aa5.23□□□□□ -1.57
BDNF-211ENST00000439476 GNG5P63218 68 aa5.23□□□□□ -1.57
BDNF-211ENST00000439476 EFNB3Q15768 340 aa5.23□□□□□ -1.57
BDNF-211ENST00000439476 C8orf46Q8TAG6 207 aa5.23□□□□□ -1.57
BDNF-211ENST00000439476 FOXC2Q99958 501 aa5.23□□□□□ -1.57
BDNF-211ENST00000439476 SIRPDQ9H106 197 aa5.23□□□□□ -1.57
BDNF-211ENST00000439476 TMEM133Q9H2Q1 129 aa5.23□□□□□ -1.57
BDNF-211ENST00000439476 CRIM1Q9NZV1 1036 aa5.23□□□□□ -1.57
BDNF-211ENST00000439476 PEMTQ9UBM1 199 aa5.23□□□□□ -1.57
BDNF-211ENST00000439476 OBSL1O75147 1896 aa5.23□□□□□ -1.57
BDNF-211ENST00000439476 KIF26AQ9ULI4 1882 aaPredicted RBP5.23□□□□□ -1.57
BDNF-211ENST00000439476 SAA1P0DJI8 122 aaPredicted RBP5.23□□□□□ -1.57
BDNF-211ENST00000439476 ERVK11-1P61568 191 aa5.23□□□□□ -1.57
BDNF-211ENST00000439476 ZFAND6Q6FIF0 208 aa5.23□□□□□ -1.57
BDNF-211ENST00000439476 GGTLC1Q9BX51 225 aa5.23□□□□□ -1.57
BDNF-211ENST00000439476 PKIGQ9Y2B9 76 aa5.23□□□□□ -1.57
BDNF-211ENST00000439476 F11RQ9Y624 299 aaKnown RBP5.23□□□□□ -1.57
BDNF-211ENST00000439476 PINLYPA6NC86 204 aa5.22□□□□□ -1.57
BDNF-211ENST00000439476 LILRA1O75019 489 aa5.22□□□□□ -1.57
BDNF-211ENST00000439476 IGHV1-2P23083 117 aa5.22□□□□□ -1.57
BDNF-211ENST00000439476 PLNP26678 52 aa5.22□□□□□ -1.57
BDNF-211ENST00000439476 MRPL20Q9BYC9 149 aaKnown RBP5.22□□□□□ -1.57
BDNF-211ENST00000439476 NPFFR1Q9GZQ6 430 aa5.22□□□□□ -1.57
BDNF-211ENST00000439476 TRBV20-1A0A075B6N2 111 aa5.22□□□□□ -1.57
BDNF-211ENST00000439476 H7C2G1 150 aa5.22□□□□□ -1.57
BDNF-211ENST00000439476 WIPF1O43516 503 aa5.22□□□□□ -1.57
BDNF-211ENST00000439476 PSPNO60542 156 aa5.22□□□□□ -1.57
BDNF-211ENST00000439476 IGKV1D-33P01593 117 aa5.22□□□□□ -1.57
BDNF-211ENST00000439476 IGKV1-33P01594 117 aa5.22□□□□□ -1.57
BDNF-211ENST00000439476 PF4P02776 101 aa5.22□□□□□ -1.57
BDNF-211ENST00000439476 IFI27P40305 119 aaPredicted RBP5.22□□□□□ -1.57
BDNF-211ENST00000439476 NUP210Q8TEM1 1887 aaPredicted RBP5.22□□□□□ -1.57
BDNF-211ENST00000439476 FBXL15Q9H469 300 aa5.22□□□□□ -1.57
BDNF-211ENST00000439476 V9GYY9 64 aa5.22□□□□□ -1.57
BDNF-211ENST00000439476 CNOT1A5YKK6 2376 aaKnown RBP5.22□□□□□ -1.57
BDNF-211ENST00000439476 TRGV11A0A075B6L2 103 aa5.22□□□□□ -1.57
BDNF-211ENST00000439476 SAA2-SAA4A0A096LPE2 208 aa5.22□□□□□ -1.57
BDNF-211ENST00000439476 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.22□□□□□ -1.57
BDNF-211ENST00000439476 SRRM5B3KS81 715 aa5.22□□□□□ -1.57
BDNF-211ENST00000439476 SAA2P0DJI9 122 aaPredicted RBP5.22□□□□□ -1.57
BDNF-211ENST00000439476 CNTFRP26992 372 aa5.22□□□□□ -1.57
BDNF-211ENST00000439476 COA6Q5JTJ3 125 aaKnown RBP5.22□□□□□ -1.57
BDNF-211ENST00000439476 RNASE6Q93091 150 aaKnown RBP5.22□□□□□ -1.57
BDNF-211ENST00000439476 TRGV9Q99603 122 aa5.22□□□□□ -1.57
BDNF-211ENST00000439476 RPUSD1Q9UJJ7 312 aaKnown RBP5.22□□□□□ -1.57
BDNF-211ENST00000439476 IGHV2-26A0A0B4J1V2 119 aa5.22□□□□□ -1.57
BDNF-211ENST00000439476 IGKV1-39P01597 117 aa5.22□□□□□ -1.57
BDNF-211ENST00000439476 IGKV1D-39P04432 117 aa5.22□□□□□ -1.57
BDNF-211ENST00000439476 REG1AP05451 166 aa5.22□□□□□ -1.57
BDNF-211ENST00000439476 LMO1P25800 156 aa5.22□□□□□ -1.57
BDNF-211ENST00000439476 ZNF415Q09FC8 603 aa5.22□□□□□ -1.57
BDNF-211ENST00000439476 FOXF2Q12947 444 aa5.22□□□□□ -1.57
BDNF-211ENST00000439476 Q6P435 159 aa5.22□□□□□ -1.57
BDNF-211ENST00000439476 ADAMTSL5Q6ZMM2 481 aa5.22□□□□□ -1.57
BDNF-211ENST00000439476 H3BTX0 84 aa5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms