RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 SRRM4A7MD48 611 aaKnown RBP9.34□□□□□ -0.91
TRAPPC9-202ENST00000438773 HLA-DQA1P01909 254 aa9.34□□□□□ -0.91
TRAPPC9-202ENST00000438773 PFN1P07737 140 aaKnown RBP9.34□□□□□ -0.91
TRAPPC9-202ENST00000438773 VDAC2P45880 294 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC9-202ENST00000438773 GNG5P63218 68 aa9.34□□□□□ -0.91
TRAPPC9-202ENST00000438773 TCF24Q7RTU0 167 aa9.34□□□□□ -0.91
TRAPPC9-202ENST00000438773 TMEM116Q8NCL8 245 aa9.34□□□□□ -0.91
TRAPPC9-202ENST00000438773 IGHV3-66A0A0C4DH42 116 aa9.34□□□□□ -0.91
TRAPPC9-202ENST00000438773 C22orf46C9J442 243 aa9.34□□□□□ -0.91
TRAPPC9-202ENST00000438773 CNTFRP26992 372 aa9.34□□□□□ -0.91
TRAPPC9-202ENST00000438773 SAA4P35542 130 aa9.34□□□□□ -0.91
TRAPPC9-202ENST00000438773 RHOGP84095 191 aa9.34□□□□□ -0.91
TRAPPC9-202ENST00000438773 RELQ04864 619 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC9-202ENST00000438773 SFTA2Q6UW10 78 aa9.34□□□□□ -0.91
TRAPPC9-202ENST00000438773 LINC00311Q8N616 119 aa9.34□□□□□ -0.91
TRAPPC9-202ENST00000438773 LAMTOR2Q9Y2Q5 125 aa9.34□□□□□ -0.91
TRAPPC9-202ENST00000438773 YTHDF2Q9Y5A9 579 aaKnown RBP9.34□□□□□ -0.91
TRAPPC9-202ENST00000438773 K7ERU9 68 aa9.34□□□□□ -0.92
TRAPPC9-202ENST00000438773 PEX7O00628 323 aa9.34□□□□□ -0.92
TRAPPC9-202ENST00000438773 RNF125Q96EQ8 232 aa9.34□□□□□ -0.92
TRAPPC9-202ENST00000438773 NPFFO15130 113 aa9.33□□□□□ -0.92
TRAPPC9-202ENST00000438773 IGHV3-11P01762 117 aa9.33□□□□□ -0.92
TRAPPC9-202ENST00000438773 NUTF2P61970 127 aaKnown RBP9.33□□□□□ -0.92
TRAPPC9-202ENST00000438773 SLC25A34Q6PIV7 304 aa9.33□□□□□ -0.92
TRAPPC9-202ENST00000438773 TMEM242Q9NWH2 141 aa9.33□□□□□ -0.92
TRAPPC9-202ENST00000438773 A0A1W2PS18 150 aa9.33□□□□□ -0.92
TRAPPC9-202ENST00000438773 B4DSR2 109 aa9.33□□□□□ -0.92
TRAPPC9-202ENST00000438773 Q1RN00 199 aa9.33□□□□□ -0.92
TRAPPC9-202ENST00000438773 TMEM78Q5T7P6 136 aa9.33□□□□□ -0.92
TRAPPC9-202ENST00000438773 MIEN1Q9BRT3 115 aa9.33□□□□□ -0.92
TRAPPC9-202ENST00000438773 C2orf88Q9BSF0 95 aa9.33□□□□□ -0.92
TRAPPC9-202ENST00000438773 Q5PR19 223 aa9.33□□□□□ -0.92
TRAPPC9-202ENST00000438773 FLNBO75369 2602 aaKnown RBP9.32□□□□□ -0.92
TRAPPC9-202ENST00000438773 F5H697 171 aa9.32□□□□□ -0.92
TRAPPC9-202ENST00000438773 J3QR89 54 aa9.32□□□□□ -0.92
TRAPPC9-202ENST00000438773 HTN1P15515 57 aa9.32□□□□□ -0.92
TRAPPC9-202ENST00000438773 RAB9AP51151 201 aa9.32□□□□□ -0.92
TRAPPC9-202ENST00000438773 RIGQ13278 110 aa9.32□□□□□ -0.92
TRAPPC9-202ENST00000438773 FAM106AQ4KMX7 169 aa9.32□□□□□ -0.92
TRAPPC9-202ENST00000438773 Q6ZVH6 145 aa9.32□□□□□ -0.92
TRAPPC9-202ENST00000438773 ASCL2Q99929 193 aa9.32□□□□□ -0.92
TRAPPC9-202ENST00000438773 SNHG12Q9BXW3 62 aa9.32□□□□□ -0.92
TRAPPC9-202ENST00000438773 IL36BQ9NZH7 164 aa9.32□□□□□ -0.92
TRAPPC9-202ENST00000438773 SETD2Q9BYW2 2564 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC9-202ENST00000438773 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.32□□□□□ -0.92
TRAPPC9-202ENST00000438773 A0A1W2PRE2 83 aa9.32□□□□□ -0.92
TRAPPC9-202ENST00000438773 PSG1P11464 419 aa9.32□□□□□ -0.92
TRAPPC9-202ENST00000438773 FBXL19-AS1Q494R0 122 aa9.32□□□□□ -0.92
TRAPPC9-202ENST00000438773 ADAMTS20P59510 1910 aa9.32□□□□□ -0.92
TRAPPC9-202ENST00000438773 USP9YO00507 2555 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC9-202ENST00000438773 FXYD7P58549 80 aa9.32□□□□□ -0.92
TRAPPC9-202ENST00000438773 CENPVQ7Z7K6 275 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC9-202ENST00000438773 TPSG1Q9NRR2 321 aa9.32□□□□□ -0.92
TRAPPC9-202ENST00000438773 NDUFA4L2Q9NRX3 87 aa9.32□□□□□ -0.92
TRAPPC9-202ENST00000438773 MT-ND6P03923 174 aa9.31□□□□□ -0.92
TRAPPC9-202ENST00000438773 LDLRAD2Q5SZI1 272 aa9.31□□□□□ -0.92
TRAPPC9-202ENST00000438773 PVRIGQ6DKI7 326 aa9.31□□□□□ -0.92
TRAPPC9-202ENST00000438773 TMEM208Q9BTX3 173 aa9.31□□□□□ -0.92
TRAPPC9-202ENST00000438773 SH2D7A6NKC9 451 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC9-202ENST00000438773 IGLV2-14P01704 120 aa9.31□□□□□ -0.92
TRAPPC9-202ENST00000438773 Q9H3A6 140 aa9.31□□□□□ -0.92
TRAPPC9-202ENST00000438773 KIAA1549Q9HCM3 1950 aa9.31□□□□□ -0.92
TRAPPC9-202ENST00000438773 MYO9AB2RTY4 2548 aa9.31□□□□□ -0.92
TRAPPC9-202ENST00000438773 H3BUX3 64 aa9.31□□□□□ -0.92
TRAPPC9-202ENST00000438773 NPSP0C0P6 89 aa9.31□□□□□ -0.92
TRAPPC9-202ENST00000438773 SMIM17P0DL12 118 aa9.31□□□□□ -0.92
TRAPPC9-202ENST00000438773 PSG9Q00887 426 aa9.31□□□□□ -0.92
TRAPPC9-202ENST00000438773 SCGB1D4Q6XE38 83 aa9.31□□□□□ -0.92
TRAPPC9-202ENST00000438773 LINC01551Q86U37 167 aa9.31□□□□□ -0.92
TRAPPC9-202ENST00000438773 LINC00479Q96M42 142 aa9.31□□□□□ -0.92
TRAPPC9-202ENST00000438773 NCKAP5O14513 1909 aa9.31□□□□□ -0.92
TRAPPC9-202ENST00000438773 H7C2G1 150 aa9.31□□□□□ -0.92
TRAPPC9-202ENST00000438773 NUPR1O60356 82 aa9.31□□□□□ -0.92
TRAPPC9-202ENST00000438773 HLA-DRB1P01911 266 aa9.31□□□□□ -0.92
TRAPPC9-202ENST00000438773 BTF3P20290 206 aaKnown RBP9.31□□□□□ -0.92
TRAPPC9-202ENST00000438773 ZNF138P52744 262 aa9.31□□□□□ -0.92
TRAPPC9-202ENST00000438773 PLP1P60201 277 aa9.31□□□□□ -0.92
TRAPPC9-202ENST00000438773 TLN2Q9Y4G6 2542 aa9.3□□□□□ -0.92
TRAPPC9-202ENST00000438773 A0A1B0GWJ7 208 aa9.3□□□□□ -0.92
TRAPPC9-202ENST00000438773 H3BVH4 76 aa9.3□□□□□ -0.92
TRAPPC9-202ENST00000438773 PAX1P15863 534 aa9.3□□□□□ -0.92
TRAPPC9-202ENST00000438773 RIPPLY3P57055 190 aa9.3□□□□□ -0.92
TRAPPC9-202ENST00000438773 WT1-ASQ06250 92 aa9.3□□□□□ -0.92
TRAPPC9-202ENST00000438773 POU2AF1Q16633 256 aa9.3□□□□□ -0.92
TRAPPC9-202ENST00000438773 A0A0G2JLM5 398 aa9.3□□□□□ -0.92
TRAPPC9-202ENST00000438773 C15orf32Q32M92 178 aa9.3□□□□□ -0.92
TRAPPC9-202ENST00000438773 ALKBH7Q9BT30 221 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC9-202ENST00000438773 TMEM189A5PLL7 270 aa9.3□□□□□ -0.92
TRAPPC9-202ENST00000438773 HIGD1CA8MV81 97 aa9.3□□□□□ -0.92
TRAPPC9-202ENST00000438773 DYNLRB2Q8TF09 96 aa9.3□□□□□ -0.92
TRAPPC9-202ENST00000438773 DEFB104AQ8WTQ1 72 aa9.3□□□□□ -0.92
TRAPPC9-202ENST00000438773 ITLN2Q8WWU7 325 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC9-202ENST00000438773 MOB4Q9Y3A3 225 aa9.3□□□□□ -0.92
TRAPPC9-202ENST00000438773 DLEU1O43261 78 aa9.29□□□□□ -0.92
TRAPPC9-202ENST00000438773 UBE2E1P51965 193 aa9.29□□□□□ -0.92
TRAPPC9-202ENST00000438773 TWIST1Q15672 202 aa9.29□□□□□ -0.92
TRAPPC9-202ENST00000438773 C8orf46Q8TAG6 207 aa9.29□□□□□ -0.92
TRAPPC9-202ENST00000438773 C5orf30Q96GV9 206 aa9.29□□□□□ -0.92
TRAPPC9-202ENST00000438773 TRGV9Q99603 122 aa9.29□□□□□ -0.92
TRAPPC9-202ENST00000438773 JKAMPQ9P055 326 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms