RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 OR4C46A6NHA9 309 aa2.97□□□□□ -1.93
USP54-206ENST00000433394 UBFD1O14562 309 aaKnown RBP2.97□□□□□ -1.93
USP54-206ENST00000433394 UBE2L6O14933 153 aa2.97□□□□□ -1.93
USP54-206ENST00000433394 DEGS1O15121 323 aa2.97□□□□□ -1.93
USP54-206ENST00000433394 IFNA17P01571 189 aa2.97□□□□□ -1.93
USP54-206ENST00000433394 C1QAP02745 245 aa2.97□□□□□ -1.93
USP54-206ENST00000433394 GPX2P18283 190 aa2.97□□□□□ -1.93
USP54-206ENST00000433394 CXCL3P19876 107 aa2.97□□□□□ -1.93
USP54-206ENST00000433394 S100A11P31949 105 aa2.97□□□□□ -1.93
USP54-206ENST00000433394 MAXP61244 160 aa2.97□□□□□ -1.93
USP54-206ENST00000433394 PKIAP61925 76 aa2.97□□□□□ -1.93
USP54-206ENST00000433394 NEDD8Q15843 81 aa2.97□□□□□ -1.93
USP54-206ENST00000433394 LTC4SQ16873 150 aa2.97□□□□□ -1.93
USP54-206ENST00000433394 HSD17B12Q53GQ0 312 aa2.97□□□□□ -1.93
USP54-206ENST00000433394 TMEM78Q5T7P6 136 aa2.97□□□□□ -1.93
USP54-206ENST00000433394 C8orf59Q8N0T1 100 aaPredicted RBP2.97□□□□□ -1.93
USP54-206ENST00000433394 OR4X1Q8NH49 305 aa2.97□□□□□ -1.93
USP54-206ENST00000433394 DNAJC30Q96LL9 226 aa2.97□□□□□ -1.93
USP54-206ENST00000433394 MRPL57Q9BQC6 102 aaKnown RBP2.97□□□□□ -1.93
USP54-206ENST00000433394 TUBA4BQ9H853 241 aa2.97□□□□□ -1.93
USP54-206ENST00000433394 HSPB8Q9UJY1 196 aa2.97□□□□□ -1.93
USP54-206ENST00000433394 PCYT1BQ9Y5K3 369 aaPredicted RBP2.97□□□□□ -1.93
USP54-206ENST00000433394 SCN8AQ9UQD0 1980 aa2.97□□□□□ -1.93
USP54-206ENST00000433394 TRIOO75962 3097 aa2.97□□□□□ -1.93
USP54-206ENST00000433394 CACNA1EQ15878 2313 aa2.97□□□□□ -1.93
USP54-206ENST00000433394 PLXNA2O75051 1894 aa2.96□□□□□ -1.93
USP54-206ENST00000433394 COL4A2P08572 1712 aa2.96□□□□□ -1.93
USP54-206ENST00000433394 KNL1Q8NG31 2342 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 PLXND1Q9Y4D7 1925 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 PRUNE2Q8WUY3 3088 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 TMEM189A5PLL7 270 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 LOC730098B7Z3J9 87 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 F6UZH7 168 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 C1QBP02746 253 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 SHBGP04278 402 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 IL3P08700 152 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 UBBP0CG47 229 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 ESDP10768 282 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 CXCL2P19875 107 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 OR10J1P30954 320 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 SPINT3P49223 89 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 EMP1P54849 157 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 FGF12P61328 243 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 HSPE1P61604 102 aaKnown RBP2.96□□□□□ -1.94
USP54-206ENST00000433394 PPP3R1P63098 170 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 HLA-DRB3P79483 266 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 EMX1Q04741 257 aaPredicted RBP2.96□□□□□ -1.94
USP54-206ENST00000433394 AGTRAPQ6RW13 159 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 AMTNQ6UX39 209 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 BAP18Q8IXM2 172 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 PDZD9Q8IXQ8 264 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 GDPD1Q8N9F7 314 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 TSTD1Q8NFU3 115 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 OR4E2Q8NGC2 313 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 OR5C1Q8NGR4 320 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 WFDC5Q8TCV5 224 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 SLC35G5Q96KT7 338 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 OR52E6Q96RD3 313 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 GNB1LQ9BYB4 327 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 AICDAQ9GZX7 198 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 SSR3Q9UNL2 185 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 HSPE1-MOB4S4R3N1 261 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 CUL9Q8IWT3 2517 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 BPTFQ12830 3046 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 SPAG17Q6Q759 2223 aa2.96□□□□□ -1.94
USP54-206ENST00000433394 XIRP2A4UGR9 3374 aa2.95□□□□□ -1.94
USP54-206ENST00000433394 MYLKQ15746 1914 aa2.95□□□□□ -1.94
USP54-206ENST00000433394 CACNA1HO95180 2353 aa2.95□□□□□ -1.94
USP54-206ENST00000433394 A0A096LPI6 279 aa2.95□□□□□ -1.94
USP54-206ENST00000433394 IGHV3-73A0A0B4J1V6 119 aa2.95□□□□□ -1.94
USP54-206ENST00000433394 A0A1W2PRE2 83 aa2.95□□□□□ -1.94
USP54-206ENST00000433394 TRAPPC13A5PLN9 417 aa2.95□□□□□ -1.94
USP54-206ENST00000433394 M0R143 59 aa2.95□□□□□ -1.94
USP54-206ENST00000433394 IGF2P01344 180 aa2.95□□□□□ -1.94
USP54-206ENST00000433394 C8GP07360 202 aa2.95□□□□□ -1.94
USP54-206ENST00000433394 NPPCP23582 126 aa2.95□□□□□ -1.94
USP54-206ENST00000433394 RAB5BP61020 215 aa2.95□□□□□ -1.94
USP54-206ENST00000433394 HOXC5Q00444 222 aa2.95□□□□□ -1.94
USP54-206ENST00000433394 IFITM2Q01629 132 aa2.95□□□□□ -1.94
USP54-206ENST00000433394 ACOT6Q3I5F7 207 aaPredicted RBP2.95□□□□□ -1.94
USP54-206ENST00000433394 DEFB123Q8N688 67 aa2.95□□□□□ -1.94
USP54-206ENST00000433394 OR51A2Q8NGJ7 313 aa2.95□□□□□ -1.94
USP54-206ENST00000433394 OR5H6Q8NGV6 325 aa2.95□□□□□ -1.94
USP54-206ENST00000433394 FNDC9Q8TBE3 224 aa2.95□□□□□ -1.94
USP54-206ENST00000433394 STAG3L4Q8TBR4 150 aa2.95□□□□□ -1.94
USP54-206ENST00000433394 GNPDA2Q8TDQ7 276 aa2.95□□□□□ -1.94
USP54-206ENST00000433394 ARL11Q969Q4 196 aa2.95□□□□□ -1.94
USP54-206ENST00000433394 EFCAB1Q9HAE3 211 aa2.95□□□□□ -1.94
USP54-206ENST00000433394 LYRM2Q9NU23 88 aaPredicted RBP2.95□□□□□ -1.94
USP54-206ENST00000433394 J3QRE1 110 aa2.94□□□□□ -1.94
USP54-206ENST00000433394 PLXNB1O43157 2135 aa2.94□□□□□ -1.94
USP54-206ENST00000433394 ZNF73O43830 326 aaPredicted RBP2.94□□□□□ -1.94
USP54-206ENST00000433394 NDUFC2O95298 119 aa2.94□□□□□ -1.94
USP54-206ENST00000433394 SERPINE1P05121 402 aa2.94□□□□□ -1.94
USP54-206ENST00000433394 OR5G3P0C626 314 aa2.94□□□□□ -1.94
USP54-206ENST00000433394 MPC1LP0DKB6 136 aa2.94□□□□□ -1.94
USP54-206ENST00000433394 LGALS3P17931 250 aaKnown RBP2.94□□□□□ -1.94
USP54-206ENST00000433394 GLRXP35754 106 aa2.94□□□□□ -1.94
USP54-206ENST00000433394 LINC00313P59037 77 aa2.94□□□□□ -1.94
USP54-206ENST00000433394 TSPEAR-AS2P59090 65 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms